Poly(ADP-Ribose) Polymerases in Plants and Their Human Counterparts: Parallels and Peculiarities

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Poly(ADP-Ribose) Polymerases in Plants and Their Human Counterparts: Parallels and Peculiarities is …
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P356DOI10.3390/IJMS20071638
P953full work available at URLhttps://www.mdpi.com/1422-0067/20/7/1638
P932PMC publication ID6479469
P698PubMed publication ID30986964

P50authorEdgar PeiterQ46751608
P2093author name stringDagmar Rissel
Edgar Peiter
P2860cites workMode of action of poly(ADP-ribose) glycohydrolaseQ72697120
Poly(ADP-ribose) binds to specific domains in DNA damage checkpoint proteinsQ73034981
Involvement of poly(ADP-ribose) polymerase and activation of caspase-3-like protease in heat shock-induced apoptosis in tobacco suspension cellsQ73828049
Regulation of p53 sequence-specific DNA-binding by covalent poly(ADP-ribosyl)ationQ74285071
petit1, a conditional growth mutant of Arabidopsis defective in sucrose-dependent elongation growthQ77532296
Plants have a sensitive perception system for the most conserved domain of bacterial flagellinQ77908621
The Arabidopsis GAMYB-like genes, MYB33 and MYB65, are microRNA-regulated genes that redundantly facilitate anther developmentQ81423153
Poly(ADP-Ribose) Polymerases in Host-Pathogen Interactions, Inflammation, and ImmunityQ90645966
Maize similar to RCD1 gene induced by salt enhances Arabidopsis thaliana abiotic stress resistanceQ90877493
Investigation of PARP-1, PARP-2, and PARG interactomes by affinity-purification mass spectrometryQ21245636
Poly(ADP-ribose)-binding zinc finger motifs in DNA repair/checkpoint proteinsQ24305388
Poly(ADP-ribose)-dependent regulation of DNA repair by the chromatin remodeling enzyme ALC1Q24321560
A family of macrodomain proteins reverses cellular mono-ADP-ribosylationQ24323450
PARP-3 and APLF function together to accelerate nonhomologous end-joiningQ24324178
Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative diseaseQ24324561
XRCC1 is specifically associated with poly(ADP-ribose) polymerase and negatively regulates its activity following DNA damageQ24522502
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in ArabidopsisQ24632891
In silico characterization of the family of PARP-like poly(ADP-ribosyl)transferases (pARTs)Q24816599
The structure and catalytic mechanism of a poly(ADP-ribose) glycohydrolaseQ27673075
Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitorsQ27677345
Structural Basis for DNA Damage-Dependent Poly(ADP-ribosyl)ation by Human PARP-1Q27679074
Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activitiesQ27679375
SAP - a putative DNA-binding motif involved in chromosomal organizationQ28145637
Poly(ADP-ribose) polymerase in plants affects energy homeostasis, cell death and stress toleranceQ28212063
Poly(ADP-ribose) polymerase-2 (PARP-2) is required for efficient base excision DNA repair in association with PARP-1 and XRCC1Q28214401
Arabidopsis radical-induced cell death1 is involved in UV-B signaling.Q45984887
Exogenous allantoin increases Arabidopsis seedlings tolerance to NaCl stress and regulates expression of oxidative stress response genesQ46240317
The relationship between pyridine nucleotides and seed dormancyQ46338973
Overexpression of an ADP-ribose pyrophosphatase, AtNUDX2, confers enhanced tolerance to oxidative stress in Arabidopsis plantsQ46361988
Discovery of ADP-ribosylation and other plant defense pathway elements through expression profiling of four different Arabidopsis-Pseudomonas R-avr interactionsQ46660671
AtMMS21 regulates DNA damage response and homologous recombination repair in ArabidopsisQ46898184
Metacaspase-8 modulates programmed cell death induced by ultraviolet light and H2O2 in Arabidopsis.Q46903274
A wheat SIMILAR TO RCD-ONE gene enhances seedling growth and abiotic stress resistance by modulating redox homeostasis and maintaining genomic integrityQ46944188
Growth alteration and leaf biochemical responses in Phaseolus vulgaris exposed to different doses of ionising radiation.Q46953673
PARP2 controls double-strand break repair pathway choice by limiting 53BP1 accumulation at DNA damage sites and promoting end-resectionQ47131342
Size and shape of poly(ADP-ribose): examination by gel filtration, gel electrophoresis and electron microscopyQ47255120
Specificity of reversible ADP-ribosylation and regulation of cellular processes.Q47446139
CEO1, a new protein from Arabidopsis thaliana, protects yeast against oxidative damage.Q47824566
Higher plants possess two structurally different poly(ADP-ribose) polymerases.Q48015547
Characterization of an Arabidopsis thaliana cDNA homologue to animal poly(ADP-ribose) polymerase.Q48073771
The DNA translocase RAD5A acts independently of the other main DNA repair pathways, and requires both its ATPase and RING domain for activity in Arabidopsis thalianaQ48137956
Nicotinate O-Glucosylation Is an Evolutionarily Metabolic Trait Important for Seed Germination under Stress Conditions in Arabidopsis thaliana.Q48165636
1H, 13C and 15N NMR chemical shift assignments of A. thaliana RCD1 RST.Q48309147
A transcriptomics approach uncovers novel roles for poly(ADP-ribosyl)ation in the basal defense response in Arabidopsis thaliana.Q48336374
Arabidopsis coactivator ALY-like proteins, DIP1 and DIP2, interact physically with the DNA-binding domain of the Zn-finger poly(ADP-ribose) polymeraseQ48355788
Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint.Q49065118
N-terminal domains of plant poly(ADP-ribose) polymerases define their association with mitotic chromosomes.Q49167902
Insights into the biogenesis, function, and regulation of ADP-ribosylation.Q50001563
Inhibition of Crm1-p53 interaction and nuclear export of p53 by poly(ADP-ribosyl)ationQ28250296
Chemical PARP inhibition enhances growth of Arabidopsis and reduces anthocyanin accumulation and the activation of stress protective mechanismsQ28483946
PARP-2, A novel mammalian DNA damage-dependent poly(ADP-ribose) polymeraseQ28511873
IAA-Ala Resistant3, an evolutionarily conserved target of miR167, mediates Arabidopsis root architecture changes during high osmotic stressQ28714930
Serine ADP-Ribosylation Depends on HPF1Q28975776
PARP-1 and Ku compete for repair of DNA double strand breaks by distinct NHEJ pathwaysQ29616041
Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functionsQ29617672
PARP inhibition: PARP1 and beyondQ29619617
A yeast growth assay to characterize plant poly(ADP-ribose) polymerase (PARP) proteins and inhibitorsQ30313254
No Silver Bullet - Canonical Poly(ADP-Ribose) Polymerases (PARPs) Are No Universal Factors of Abiotic and Biotic Stress Resistance of Arabidopsis thaliana.Q30313407
Cytosolic calcium signals elicited by the pathogen-associated molecular pattern flg22 in stomatal guard cells are of an oscillatory nature.Q30317061
The nuclear protein Poly(ADP-ribose) polymerase 3 (AtPARP3) is required for seed storability in Arabidopsis thaliana.Q30317521
The plant vacuole: emitter and receiver of calcium signalsQ30318457
The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants.Q30386626
The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.Q31106427
Microbial pathogens trigger host DNA double-strand breaks whose abundance is reduced by plant defense responsesQ31156407
Interaction between ATM and PARP-1 in response to DNA damage and sensitization of ATM deficient cells through PARP inhibitionQ33282784
PARP1-dependent kinetics of recruitment of MRE11 and NBS1 proteins to multiple DNA damage sitesQ33306325
RCD1 and SRO1 are necessary to maintain meristematic fate in Arabidopsis thalianaQ33350327
Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in ArabidopsisQ33361642
Serotonin modulates Arabidopsis root growth via changes in reactive oxygen species and jasmonic acid-ethylene signalingQ33362533
Global analysis of transcriptional regulation by poly(ADP-ribose) polymerase-1 and poly(ADP-ribose) glycohydrolase in MCF-7 human breast cancer cellsQ33553364
Failure to degrade poly(ADP-ribose) causes increased sensitivity to cytotoxicity and early embryonic lethalityQ33580247
Abscisic acid-induced stomatal closure mediated by cyclic ADP-riboseQ33617364
The Zn3 domain of human poly(ADP-ribose) polymerase-1 (PARP-1) functions in both DNA-dependent poly(ADP-ribose) synthesis activity and chromatin compactionQ33897970
The new life of a centenarian: signalling functions of NAD(P).Q33976408
Human poly(ADP-ribose) glycohydrolase is expressed in alternative splice variants yielding isoforms that localize to different cell compartmentsQ33979291
Family-wide analysis of poly(ADP-ribose) polymerase activityQ34009850
Isolation and characterization of the cDNA encoding bovine poly(ADP-ribose) glycohydrolaseQ34064483
Arabidopsis gene knockout: phenotypes wantedQ34168005
Spatial and temporal cellular responses to single-strand breaks in human cells.Q34197035
The PARP superfamilyQ34335821
Identification and characterization of a mammalian 39-kDa poly(ADP-ribose) glycohydrolaseQ34466221
Parp-1 protects homologous recombination from interference by Ku and Ligase IV in vertebrate cellsQ34500845
PARP-3 associates with polycomb group bodies and with components of the DNA damage repair machinery.Q34559482
Overlapping roles for PARP1 and PARP2 in the recruitment of endogenous XRCC1 and PNKP into oxidized chromatinQ38726326
Protecting DNA from errors and damage: an overview of DNA repair mechanisms in plants compared to mammalsQ38779950
Plant PARPs, PARGs and PARP-like Proteins.Q38811281
PARPing for balance in the homeostasis of poly(ADP-ribosyl)ationQ38818075
NO-Mediated [Ca2+]cyt Increases Depend on ADP-Ribosyl Cyclase Activity in ArabidopsisQ38856381
Unique drought resistance functions of the highly ABA-induced clade A protein phosphatase 2Cs.Q38907599
Poly(ADP-ribose) binding to Chk1 at stalled replication forks is required for S-phase checkpoint activationQ39041714
Impact of Combined Abiotic and Biotic Stresses on Plant Growth and Avenues for Crop Improvement by Exploiting Physio-morphological TraitsQ39274343
Transgenic Arabidopsis plants expressing the type 1 inositol 5-phosphatase exhibit increased drought tolerance and altered abscisic acid signalingQ39349790
PARP-3 is a mono-ADP-ribosylase that activates PARP-1 in the absence of DNAQ39430828
The transcription factor interacting protein RCD1 contains a novel conserved domainQ39536107
RCD1-DREB2A interaction in leaf senescence and stress responses in Arabidopsis thalianaQ39545489
Abscisic acid signaling through cyclic ADP-ribose in plantsQ39605724
F-box protein DOR functions as a novel inhibitory factor for abscisic acid-induced stomatal closure under drought stress in Arabidopsis,.Q39627923
Cytological detection of poly (ADP-ribose) polymeraseQ39989515
Functional localization of two poly(ADP-ribose)-degrading enzymes to the mitochondrial matrixQ40054292
Ataxia telangiectasia mutated (ATM) signaling network is modulated by a novel poly(ADP-ribose)-dependent pathway in the early response to DNA-damaging agentsQ40146768
Poly(Adenosine Diphosphate Ribose) Glycohydrolase in Germinating Wheat EmbryosQ40159103
Demonstration of in vitro covalent modification of chromosomal proteins by poly(adp) ribosylation in plant nucleiQ40280503
CRISPR/Cas9-Induced Double-Strand Break Repair in Arabidopsis Nonhomologous End-Joining Mutants.Q40864412
Alleles of newly identified barley gene HvPARP3 exhibit changes in efficiency of DNA repairQ41262120
Regulation of DNA Repair Mechanisms: How the Chromatin Environment Regulates the DNA Damage ResponseQ41573813
High resolution fractionation and characterization of ADP-ribose polymersQ41580809
The radical induced cell death protein 1 (RCD1) supports transcriptional activation of genes for chloroplast antioxidant enzymesQ41768851
Distribution of protein poly(ADP-ribosyl)ation systems across all domains of lifeQ41817338
PARP-1 Activation Requires Local Unfolding of an Autoinhibitory DomainQ42095016
OsSRO1a Interacts with RNA Binding Domain-Containing Protein (OsRBD1) and Functions in Abiotic Stress Tolerance in YeastQ42545959
Two small enzyme isoforms mediate mammalian mitochondrial poly(ADP-ribose) glycohydrolase (PARG) activity.Q42612100
Ionising radiation induces the expression of PARP-1 and PARP-2 genes in ArabidopsisQ42657852
Structural Basis of Detection and Signaling of DNA Single-Strand Breaks by Human PARP-1.Q43131333
Conditional root expansion mutants of ArabidopsisQ43180879
Disruption of poly(ADP-ribosyl)ation mechanisms alters responses of Arabidopsis to biotic stressQ43248448
Studies of the expression of human poly(ADP-ribose) polymerase-1 in Saccharomyces cerevisiae and identification of PARP-1 substrates by yeast proteome microarray screeningQ43251808
Pyridine nucleotide cycling and control of intracellular redox state in relation to poly (ADP-ribose) polymerase activity and nuclear localization of glutathione during exponential growth of Arabidopsis cells in cultureQ43262291
Modulation of the poly(ADP-ribosyl)ation reaction via the Arabidopsis ADP-ribose/NADH pyrophosphohydrolase, AtNUDX7, is involved in the response to oxidative stressQ43298134
Novel inhibitors of poly(ADP-ribose) polymerase/PARP1 and PARP2 identified using a cell-based screen in yeastQ43612292
Disease resistance gene-induced growth inhibition is enhanced by rcd1 independent of defense activation in ArabidopsisQ43693599
Poly(adenoise diphosphate ribose) in wheat [proceedings]Q43846493
tej defines a role for poly(ADP-ribosyl)ation in establishing period length of the arabidopsis circadian oscillatorQ44057727
Vascular associated death1, a novel GRAM domain-containing protein, is a regulator of cell death and defense responses in vascular tissuesQ44084203
A methyl viologen-resistant mutant of Arabidopsis, which is allelic to ozone-sensitive rcd1, is tolerant to supplemental ultraviolet-B irradiationQ44681230
ABA activates ADPR cyclase and cADPR induces a subset of ABA-responsive genes in ArabidopsisQ44846226
Arabidopsis RADICAL-INDUCED CELL DEATH1 belongs to the WWE protein-protein interaction domain protein family and modulates abscisic acid, ethylene, and methyl jasmonate responsesQ44945515
The N terminus of bacterial elongation factor Tu elicits innate immunity in Arabidopsis plants.Q45153591
PARylation of the forkhead-associated domain protein DAWDLE regulates plant immunityQ45161576
Ozone-induced programmed cell death in the Arabidopsis radical-induced cell death1 mutantQ45280704
Macrodomain-containing proteins are new mono-ADP-ribosylhydrolases.Q45349630
Nicotinamidase activity is important for germination.Q34640962
Protein poly(ADP-ribosyl)ation regulates arabidopsis immune gene expression and defense responses.Q34874846
Functional interaction between PARP-1 and PARP-2 in chromosome stability and embryonic development in mouseQ35018839
A special member of the rice SRO family, OsSRO1c, mediates responses to multiple abiotic stresses through interaction with various transcription factors.Q35066742
Transcriptomics and functional genomics of ROS-induced cell death regulation by RADICAL-INDUCED CELL DEATH1.Q35097137
Analysis of poly(ADP-Ribose) polymerases in Arabidopsis telomere biologyQ35097621
Poly(ADP-ribose)polymerase activity controls plant growth by promoting leaf cell number.Q35108954
Loss of poly(ADP-ribose) glycohydrolase causes progressive neurodegeneration in Drosophila melanogasterQ35121374
PARP goes transcriptionQ35155777
Iduna is a poly(ADP-ribose) (PAR)-dependent E3 ubiquitin ligase that regulates DNA damageQ35180889
The plasma membrane Na+/H+ antiporter SOS1 interacts with RCD1 and functions in oxidative stress tolerance in ArabidopsisQ35214801
Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expressionQ35214806
Senescence-associated barley NAC (NAM, ATAF1,2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domainQ35372249
PARP2 Is the Predominant Poly(ADP-Ribose) Polymerase in Arabidopsis DNA Damage and Immune Responses.Q35581323
Staying Alive: Molecular Aspects of Seed LongevityQ35861425
Silencing of poly(ADP-ribose) polymerase in plants alters abiotic stress signal transductionQ36002679
A requirement for PARP-1 for the assembly or stability of XRCC1 nuclear foci at sites of oxidative DNA damageQ36119231
Arabidopsis PARG1 is the key factor promoting cell survival among the enzymes regulating post-translational poly(ADP-ribosyl)ationQ36227209
Differences and commonalities of plant responses to single and combined stresses.Q36332665
An alternative telomerase RNA in Arabidopsis modulates enzyme activity in response to DNA damageQ36421764
The SNAC1-targeted gene OsSRO1c modulates stomatal closure and oxidative stress tolerance by regulating hydrogen peroxide in rice.Q36523806
CHFR is important for the first wave of ubiquitination at DNA damage sitesQ36580923
PARP-2 domain requirements for DNA damage-dependent activation and localization to sites of DNA damageQ36627921
Interaction between PARP-1 and ATR in mouse fibroblasts is blocked by PARP inhibitionQ36978877
Proteome-wide identification of poly(ADP-ribose) binding proteins and poly(ADP-ribose)-associated protein complexesQ37014677
A systematic analysis of the PARP protein family identifies new functions critical for cell physiology.Q37130712
Genotoxic stress in plants: shedding light on DNA damage, repair and DNA repair helicasesQ37225994
PARP is activated at stalled forks to mediate Mre11-dependent replication restart and recombination.Q37334922
Poly(ADP-ribose) signals to mitochondrial AIF: a key event in parthanatosQ37426834
Fluorescent sensors of PARP-1 structural dynamics and allosteric regulation in response to DNA damageQ37522977
PARPs and ADP-ribosylation: recent advances linking molecular functions to biological outcomesQ37661664
Toward a unified nomenclature for mammalian ADP-ribosyltransferases.Q37682470
The second zinc-finger domain of poly(ADP-ribose) polymerase determines specificity for single-stranded breaks in DNA.Q37738852
Poly(ADP-ribosyl)ation in plantsQ37863877
Functions of the poly(ADP-ribose) polymerase superfamily in plantsQ37921198
Poly(ADP-ribose) is required for spindle assembly and structure.Q50668611
Overexpression of the RADICAL-INDUCED CELL DEATH1 (RCD1) gene of Arabidopsis causes weak rcd1 phenotype with compromised oxidative-stress responses.Q50718242
Poly(ADP-ribose)polymerases are involved in microhomology mediated back-up non-homologous end joining in Arabidopsis thaliana.Q50746689
Poly(ADP-ribose) polymerases regulate cell division and development in Arabidopsis roots.Q50977186
Structures and Short Linear Motif of Disordered Transcription Factor Regions Provide Clues to the Interactome of the Cellular Hub Protein Radical-induced Cell Death1.Q51306890
The Arabidopsis circadian clock incorporates a cADPR-based feedback loop.Q51898341
The paralogous genes RADICAL-INDUCED CELL DEATH1 and SIMILAR TO RCD ONE1 have partially redundant functions during Arabidopsis development.Q51929863
Unequally redundant RCD1 and SRO1 mediate stress and developmental responses and interact with transcription factors.Q51932027
A comprehensive dataset of genes with a loss-of-function mutant phenotype in Arabidopsis.Q52620577
A Canonical DREB2-Type Transcription Factor in Lily Is Post-translationally Regulated and Mediates Heat Stress Response.Q52641612
Are solar UV-B- and UV-A-dependent gene expression and metabolite accumulation in Arabidopsis mediated by the stress response regulator RADICAL-INDUCED CELL DEATH1?Q53059747
Random mutagenesis of the poly(ADP-ribose) polymerase catalytic domain reveals amino acids involved in polymer branching.Q54558116
The zinc fingers of human poly(ADP-ribose) polymerase are differentially required for the recognition of DNA breaks and nicks and the consequent enzyme activation. Other structures recognize intact DNA.Q54704890
Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1Q57448556
Ozone-Sensitive Arabidopsis rcd1 Mutant Reveals Opposite Roles for Ethylene and Jasmonate Signaling Pathways in Regulating Superoxide-Dependent Cell DeathQ58063708
Nuclear Import of Poly(ADP-Ribose) Polymerase 2 Is Mediated by Importin-α and a Nuclear Localization Sequence Located Between the Predicted SAP DomainsQ59136902
Conditional Circadian Dysfunction of the Arabidopsis early-flowering 3 MutantQ59303613
The involvement of poly(ADP-ribose) polymerase in the oxidative stress responses in plantsQ59408497
3-Aminobenzamide Blocks MAMP-Induced Callose Deposition Independently of Its Poly(ADPribosyl)ation Inhibiting ActivityQ60947426
PARP-3, a DNA-dependent PARP with emerging roles in double-strand break repair and mitotic progressionQ64386901
Effect of polyamines and Mg++ on poly(ADP-ribose) synthesis and ADP-ribosylation of histones in wheatQ66979012
Poly(ADP-ribosyl)ation of chromatin in an in-vitro poly(ADP-ribose)-turnover systemQ67571155
UV-B- and oxidative stress-induced increase in nicotinamide and trigonelline and inhibition of defensive metabolism induction by poly(ADP-ribose)polymerase inhibitor in plant tissueQ71006889
New insights into the molecular and cellular functions of poly(ADP-ribose) and PARPsQ38020082
Order by disorder in plant signalingQ38028163
Poly(ADP-ribose): a signaling molecule in different paradigms of cell deathQ38224413
Poly(ADP-ribose) polymerases in double-strand break repair: focus on PARP1, PARP2 and PARP3.Q38228791
The interactive effects of simultaneous biotic and abiotic stresses on plants: mechanistic understanding from drought and pathogen combination.Q38302735
Poly(ADP-ribose) polymerase and Ku autoantigen form a complex and synergistically bind to matrix attachment sequencesQ38322936
Two closely related subclass II SnRK2 protein kinases cooperatively regulate drought-inducible gene expressionQ38345033
Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination processQ38358205
Global gene expression analysis of transgenic, mannitol-producing, and salt-tolerant Arabidopsis thaliana indicates widespread changes in abiotic and biotic stress-related genes.Q38699666
Dissection of ADP-ribose polymer synthesis into individual steps of initiation, elongation, and branchingQ71787227
Poly(ADP-ribose) polymerase in plant nucleiQ72164043
Release of Ca2+ from individual plant vacuoles by both InsP3 and cyclic ADP-riboseQ72196278
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectArabidopsis thalianaQ158695
abiotic stressQ4667893
PampQ47469225
poly(adp-ribose) polymeraseQ61512503
P304page(s)1638
P577publication date2019-01-01
2019-04-02
P1433published inInternational Journal of Molecular SciencesQ3153277
P1476titlePoly(ADP-Ribose) Polymerases in Plants and Their Human Counterparts: Parallels and Peculiarities
P478volume20

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