ARID1A spatially partitions interphase chromosomes

scientific article published on 22 May 2019

ARID1A spatially partitions interphase chromosomes is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1126/SCIADV.AAW5294
P932PMC publication ID6531001
P698PubMed publication ID31131328

P50authorRugang ZhangQ87764987
Hsin-Yao TangQ87845082
Andrew V KossenkovQ88537156
Nail FatkhutdinovQ89790846
Leah F RosinQ91086959
Jennifer M LuppinoQ92309403
Hideki TanizawaQ84894930
Shuai WuQ86599026
P2093author name stringDavid W Speicher
Alessandro Gardini
Osamu Iwasaki
Eric F Joyce
Ken-Ichi Noma
P2860cites workCondensin II promotes the formation of chromosome territories by inducing axial compaction of polyploid interphase chromosomesQ21144911
Ultrafast and memory-efficient alignment of short DNA sequences to the human genomeQ21183894
ARID1A mutations in endometriosis-associated ovarian carcinomasQ24610484
Condensin II drives large-scale folding and spatial partitioning of interphase chromosomes in Drosophila nucleiQ89997946
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identitiesQ24617969
Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomicsQ26776098
Fast gapped-read alignment with Bowtie 2Q27860699
Condensin-mediated chromosome organization in fission yeastQ28076900
Comprehensive mapping of long-range interactions reveals folding principles of the human genomeQ28131819
Synthetic lethality by targeting EZH2 methyltransferase activity in ARID1A-mutated cancersQ28257103
Topological domains in mammalian genomes identified by analysis of chromatin interactionsQ28264221
ARID1A mutations in cancer: another epigenetic tumor suppressor?Q28280605
Discovery and saturation analysis of cancer genes across 21 tumour typesQ28305204
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2Q29547403
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genomeQ29547458
A 3D map of the human genome at kilobase resolution reveals principles of chromatin loopingQ29615814
limma powers differential expression analyses for RNA-sequencing and microarray studiesQ29617988
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice.Q30354461
Iterative correction of Hi-C data reveals hallmarks of chromosome organizationQ30560716
BigWig and BigBed: enabling browsing of large distributed datasetsQ34070727
Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy.Q34342958
Insulator function and topological domain border strength scale with architectural protein occupancyQ34485099
Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probesQ34510083
SCFSlimb ubiquitin ligase suppresses condensin II-mediated nuclear reorganization by degrading Cap-H2.Q34636206
Chromosome positioning in the interphase nucleusQ34831329
Identification of Gene Positioning Factors Using High-Throughput Imaging MappingQ35961554
A novel role for the condensin II complex in cellular senescenceQ36185722
The 3D Genome as Moderator of Chromosomal CommunicationQ36678954
Maintenance of interphase chromosome compaction and homolog pairing in Drosophila is regulated by the condensin cap-h2 and its partner Mrg15.Q37142651
SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cellsQ37313665
Multiple structural maintenance of chromosome complexes at transcriptional regulatory elements.Q37344597
SWI/SNF nucleosome remodellers and cancer.Q37886668
Genome architecture: domain organization of interphase chromosomesQ38090110
Chromatin-driven behavior of topologically associating domainsQ38256534
ARID1B is a specific vulnerability in ARID1A-mutant cancers.Q38276153
Condensins are Required for Maintenance of Nuclear ArchitectureQ42152182
Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancersQ42378723
Exome Sequencing Landscape Analysis in Ovarian Clear Cell Carcinoma Shed Light on Key Chromosomal Regions and Mutation Gene Networks.Q47829140
ARID1A-mutated ovarian cancers depend on HDAC6 activityQ48358070
The Yeast Genomes in Three Dimensions: Mechanisms and Functions.Q52530549
P4510describes a project that usesImageJQ1659584
limmaQ112236343
P433issue5
P407language of work or nameEnglishQ1860
P304page(s)eaaw5294
P577publication date2019-05-22
P1433published inScience AdvancesQ19881044
P1476titleARID1A spatially partitions interphase chromosomes
P478volume5

Reverse relations

cites work (P2860)
Q93162295ARID1A promotes genomic stability through protecting telomere cohesion
Q83227126Chromosome territory formation attenuates the translocation potential of cells
Q95329221Spatial competition shapes the dynamic mutational landscape of normal esophageal epithelium

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