Structural plasmid instability in Bacillus subtilis: effect of direct and inverted repeats

scientific article published on 01 June 1988

Structural plasmid instability in Bacillus subtilis: effect of direct and inverted repeats is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/BF00330849
P698PubMed publication ID3138528

P2093author name stringB P Peeters
G Venema
S Bron
J H de Boer
P2860cites workDNA sequencing with chain-terminating inhibitorsQ22066207
A system for shotgun DNA sequencingQ24602315
Studies on transformation of Escherichia coli with plasmidsQ27860598
Production of single-stranded plasmid DNAQ29547328
The structure and evolution of the human beta-globin gene familyQ29618222
Are single-stranded circles intermediates in plasmid DNA replication?Q33879604
Illegitimate recombination occurs between the replication origin of the plasmid pC194 and a progressing replication forkQ33881304
Homologous recombination in Escherichia coli: dependence on substrate length and homologyQ33951751
Excision of transposon Tn5 is dependent on the inverted repeats but not on the transposase function of Tn5Q35310150
Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureusQ35599903
Illegitimate recombination at the replication origin of bacteriophage M13.Q35605677
Completion of the nucleotide sequence of the central region of Tn5 confirms the presence of three resistance genesQ36133110
Structural intermediates of deletion mutagenesis: a role for palindromic DNAQ36247516
Template-directed pausing in in vitro DNA synthesis by DNA polymerase a from Drosophila melanogaster embryosQ36281358
Analysis of plasmid deletional instability in Bacillus subtilisQ36305477
Nucleotide sequence and functional map of pE194, a plasmid that specifies inducible resistance to macrolide, lincosamide, and streptogramin type B antibodiesQ36310186
Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistanceQ36310190
Homology requirements for recombination in Escherichia coliQ37541242
Generation of deletions in pneumococcal mal genes cloned in Bacillus subtilisQ37563825
Perfect palindromic lac operator DNA sequence exists as a stable cruciform structure in supercoiled DNA in vitro but not in vivoQ37607301
Studies on the mechanism of enzymatic DNA elongation by Escherichia coli DNA polymerase II.Q39396194
Use of chromosomal integration in the establishment and expression of blaZ, a Staphylococcus aureus beta-lactamase gene, in Bacillus subtilisQ39967894
Transposable elements in prokaryotesQ40128634
Nucleotide sequence of bacteriophage f1 DNAQ40142434
New cryptic plasmid of Bacillus subtilis and restriction analysis of other plasmids found by general screeningQ40334556
Mechanism of intramolecular recyclization and deletion formation following transformation of Escherichia coli with linearized plasmid DNA.Q40419621
pUR222, a vector for cloning and rapid chemical sequencing of DNAQ40499598
The Intergenic Region and the Origins for Filamentous Phage DNA ReplicationQ40609019
Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacI gene of Escherichia coliQ41008292
Segregation of New Lysogenic Types during Growth of a Doubly Lysogenic Strain Derived from Escherichia Coli K12.Q41944871
Local DNA sequence control of deletion formation in Escherichia coli plasmid pBR322.Q42959914
Nucleotide sequence and exact localization of the neomycin phosphotransferase gene from transposon Tn5Q43810140
Pauses at positions of secondary structure during in vitro replication of single-stranded fd Bacteriophage DNA by T4 DNA polymeraseQ44161892
Nucleotide sequence of the Streptococcus faecalis plasmid gene encoding the 3'5''-aminoglycoside phosphotransferase type IIIQ48396563
Recombination between short direct repeats in a RecA hostQ48406754
Structural Analysis of Tn5Q48411201
Three Tn10-associated excision events: Relationship to transposition and role of direct and inverted repeatsQ50217967
Ultraviolet inactivation and excision-repair in Bacillus subtilis I. Construction and characterization of a transformable eightfold auxotrophic strain and two ultraviolet-sensitive derivativesQ54293404
Stable gene amplification in the chromosome of Bacillus subtilis.Q54461333
The effect of restriction on shotgun cloning and plasmid stability in Bacillus subtilis Marburg.Q54762274
Stability function in the Bacillus subtilis plasmid pTA 1060.Q54763941
Mechanisms of spontaneous mutagenesis: an analysis of the spectrum of spontaneous mutation in the Escherichia coli lacI gene.Q54780272
On the formation of spontaneous deletions: The importance of short sequence homologies in the generation of large deletionsQ56521354
pKUN, vectors for the separate production of both DNA strands of recombinant plasmidsQ68221629
Segregational instability of pUB110-derived recombinant plasmids in Bacillus subtilisQ70130050
Cruciform formation in a negatively supercoiled DNA may be kinetically forbidden under physiological conditionsQ71789056
Mechanism of illegitimate recombination: common sites for recombination and cleavage mediated by E. coli DNA gyraseQ72403270
In vitro study of illegitimate recombination: involvement of DNA gyraseQ72911641
Instability of palindromic DNA in Escherichia coliQ72911645
P433issue3
P921main subjectBacillus subtilisQ131238
P304page(s)450-458
P577publication date1988-06-01
P1433published inMolecular Genetics and GenomicsQ15753424
P1476titleStructural plasmid instability in Bacillus subtilis: effect of direct and inverted repeats
P478volume212

Reverse relations

cites work (P2860)
Q30739544A new family of highly variable proteins in the Chlamydophila pneumoniae genome
Q72275713Acinetobacter calcoaceticus liberates chromosomal DNA during induction of competence by cell lysis
Q33978743Acquisition of chloramphenicol resistance by the linearization and integration of the entire staphylococcal plasmid pC194 into the chromosome of Streptococcus pneumoniae
Q40829765An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction
Q69251959Analysis of structural and biological parameters affecting plasmid deletion formation in Bacillus subtilis
Q35619388Apparent and real recombination frequencies in multicopy plasmids: the need for a novel approach in frequency determination
Q97531677Automated design of thousands of nonrepetitive parts for engineering stable genetic systems
Q40819665Breakage--reunion and copy choice mechanisms of recombination between short homologous sequences
Q33552454Characterization of a Brucella species 25-kilobase DNA fragment deleted from Brucella abortus reveals a large gene cluster related to the synthesis of a polysaccharide
Q39837104Characterization of lipase-deficient mutants of Acinetobacter calcoaceticus BD413: identification of a periplasmic lipase chaperone essential for the production of extracellular lipase
Q40395425Characterization of the replication region of the Bacillus subtilis plasmid pLS20: a novel type of replicon.
Q39504391Competence repression under oxygen limitation through the two-component MicAB signal-transducing system in Streptococcus pneumoniae and involvement of the PAS domain of MicB.
Q37633234Copy-choice illegitimate DNA recombination revisited
Q37536008Copy-choice recombination mediated by DNA polymerase III holoenzyme from Escherichia coli
Q39718954DIR: a novel DNA rearrangement associated with inverted repeats.
Q34973894Deletion mutations caused by DNA strand slippage in Acinetobacter baylyi
Q39592785Determination of the frequency of retroviral recombination between two identical sequences within a provirus
Q77211097Effect of the replication mode of a plasmid on the stability of multimeric endoxylanase genes in Bacillus subtilis
Q27497201Expression and purification of ELP-intein-tagged target proteins in high cell density E. coli fermentation
Q69705868Extremely large chromosomal deletions are intimately involved in genetic instability and genomic rearrangements in Streptomyces glaucescens
Q69355202Genetic deletions between directly repeated sequences in bacteriophage T7
Q39600720Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution
Q36154148Heterogeneous genomic amplification in Streptomyces glaucescens: structure, location and junction sequence analysis
Q34441884Homologous recombination of a flanking repeat gene cluster is a mechanism for a common contiguous gene deletion syndrome
Q48325433Influence of IS256 on Genome Variability and Formation of Small-Colony Variants in Staphylococcus aureus
Q33737302Mutation analysis of PobR and PcaU, closely related transcriptional activators in acinetobacter
Q44366516Novel plasmid marker rescue transformation system for molecular cloning in Bacillus subtilis enabling direct selection of recombinants
Q39615054Origin and fate of repeats in bacteria
Q71758213Overproduction of the ATP-dependent nuclease AddAB improves the structural stability of a model plasmid system in Bacillus subtilis
Q33984716Phenotypic expression of PCR-generated random mutations in a Pseudomonas putida gene after its introduction into an Acinetobacter chromosome by natural transformation
Q41989146Plasmid deletion formation between short direct repeats in Bacillus subtilis is stimulated by single-stranded rolling-circle replication intermediates
Q37117378Protein serine/threonine kinase StkP positively controls virulence and competence in Streptococcus pneumoniae.
Q34934695RegR, a Global LacI/GalR Family Regulator, Modulates Virulence and Competence in Streptococcus pneumoniae
Q33604823Repeats in an extracellular protein of weakly pathogenic strains of Streptococcus suis type 2 are absent in pathogenic strains
Q34045705Site-directed mutagenesis of large DNA palindromes: construction and in vitro characterization of herpes simplex virus type 1 mutants containing point mutations that eliminate the oriL or oriS initiation function
Q37608909Spontaneous deletion formation within the beta-galactosidase gene of Lactobacillus bulgaricus
Q35673390Strand displacement amplification as an in vitro model for rolling-circle replication: deletion formation and evolution during serial transfer
Q67546830Structural and functional analysis of two cryptic plasmids from Lactobacillus pentosus MD353 and Lactobacillus plantarum ATCC 8014
Q34748884The SbcCD nuclease of Escherichia coli is a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA
Q37274944The StkP/PhpP signaling couple in Streptococcus pneumoniae: cellular organization and physiological characterization
Q42283874The construction of Bacillus thuringiensis strains expressing novel entomocidal delta-endotoxin combinations
Q39842560The expression of a plasmid-specified exported protein causes structural plasmid instability in Bacillus subtilis
Q38669585The family of highly interrelated single-stranded deoxyribonucleic acid plasmids
Q42599484The integrated state of the rolling-circle plasmid pTB913 in the composite Bacillus plasmid pTB19.