Target DNA bending is an important specificity determinant in target site selection in Tn10 transposition

scientific article published on 01 July 2003

Target DNA bending is an important specificity determinant in target site selection in Tn10 transposition is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/S0022-2836(03)00588-6
P698PubMed publication ID12823965

P2093author name stringDavid B Haniford
Patrick A Pribil
P2860cites workA specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragmentQ64390107
Intramolecular transposition by Tn10Q69358286
IS231A insertion specificity: consensus sequence and DNA bending at the target siteQ72431306
A symmetrical six-base-pair target site sequence determines Tn10 insertion specificityQ72925979
Substrate recognition and induced DNA deformation by transposase at the target-capture stage of Tn10 transpositionQ73053743
DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitroQ77144854
Divalent cations stabilize unstacked conformations of DNA and RNA by interacting with base pi systemsQ77710278
All three residues of the Tn 10 transposase DDE catalytic triad function in divalent metal ion bindingQ77895269
Tn10 insertion specificity is strongly dependent upon sequences immediately adjacent to the target-site consensus sequenceQ24564196
The homing endonuclease I-CreI uses three metals, one of which is shared between the two active sitesQ27630852
Sequence selectivity and degeneracy of a restriction endonuclease mediated by DNA intercalationQ27636803
Crystal structure of the intein homing endonuclease PI-SceI bound to its recognition sequenceQ27639613
Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracingQ27685433
Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turnQ27734267
Substrate recognition and induced DNA distortion by the PI-SceI endonuclease, an enzyme generated by protein splicingQ28296459
DNA sequence-dependent deformability deduced from protein-DNA crystal complexesQ29616629
Anatomy of a preferred target site for the bacterial insertion sequence IS903.Q31937836
Mismatch-targeted transposition of Mu: a new strategy to map genetic polymorphismQ34038089
The locus of sequence-directed and protein-induced DNA bendingQ34255559
Targeted transposition by the V(D)J recombinaseQ34276357
Target DNA structure plays a critical role in Tn7 transpositionQ34582667
Tn10 transpososome assembly involves a folded intermediate that must be unfolded for target capture and strand transferQ34664446
Tn7: a target site-specific transposonQ36460746
Excision of Tn10 from the donor site during transposition occurs by flush double-strand cleavages at the transposon terminiQ37021318
Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transpositionQ37622400
DNA bending creates favored sites for retroviral integration: an explanation for preferred insertion sites in nucleosomes.Q37636969
Saturation mutagenesis of His114 of EcoRI reveals relaxed-specificity mutantsQ38295212
Review: ethidium fluorescence assays. Part 1. Physicochemical studiesQ39284056
Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavageQ39645547
Plasmid permutation vectors to monitor DNA bendingQ40392180
Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexesQ40556347
Intercalation, DNA kinking, and the control of transcription.Q40985573
Target site selection in transpositionQ41550231
Factors responsible for target site selection in Tn10 transposition: a role for the DDE motif in target DNA capture.Q42095907
Targeting transposition: at home in the genomeQ46207623
The gamma delta resolvase induces an unusual DNA structure at the recombinational crossover pointQ46294240
The Tn10 synaptic complex can capture a target DNA only after transposon excision.Q51104158
Kinetic and structural analysis of a cleaved donor intermediate and a strand transfer intermediate in Tn10 transposition.Q54701850
[20] Nuclease activity of 1,10-phenanthroline-copper in study of protein—DNA interactionsQ56609364
Tn10 transposition via a DNA hairpin intermediateQ64389039
P433issue2
P304page(s)247-259
P577publication date2003-07-01
P1433published inJournal of Molecular BiologyQ925779
P1476titleTarget DNA bending is an important specificity determinant in target site selection in Tn10 transposition
P478volume330