Destabilization of the HIV-1 complementary sequence of TAR by the nucleocapsid protein through activation of conformational fluctuations

scientific article published on 01 February 2003

Destabilization of the HIV-1 complementary sequence of TAR by the nucleocapsid protein through activation of conformational fluctuations is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/S0022-2836(02)01430-4
P698PubMed publication ID12581633

P2093author name stringYves Mély
Bernard P Roques
Jean Luc Darlix
Jean Pierre Clamme
Joel Azoulay
P2860cites workTwo-state model of conformational fluctuation in a DNA hairpin-loopQ57401439
Heteronuclear NMR studies of the interaction of tRNA3Lys with HIV-1 nucleocapsid protein11Edited by M. F. SummersQ57526892
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Nucleic-acid-chaperone activity of retroviral nucleocapsid proteins: significance for viral replicationQ77362262
Effects of temperature on the dynamic behaviour of the HIV-1 nucleocapsid NCp7 and its DNA complexQ77694896
The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complementQ27739451
Molecular beacons: probes that fluoresce upon hybridizationQ28274024
Molecular dynamics in living cells observed by fluorescence correlation spectroscopy with one- and two-photon excitationQ29542956
First large scale chemical synthesis of the 72 amino acid HIV-1 nucleocapsid protein NCp7 in an active form.Q30378198
Configurational diffusion down a folding funnel describes the dynamics of DNA hairpinsQ30994432
Human immunodeficiency virus type 1 nucleocapsid protein can prevent self-priming of minus-strand strong stop DNA by promoting the annealing of short oligonucleotides to hairpin sequencesQ33603932
On the role of magnesium ions in RNA stabilityQ33638739
Analyzing the distribution of decay constants in pulse-fluorimetry using the maximum entropy methodQ34259968
RNA chaperones and the RNA folding problemQ34294471
Structural features in the HIV-1 repeat region facilitate strand transfer during reverse transcriptionQ34363753
Biological and chemical applications of fluorescence correlation spectroscopy: a reviewQ34492569
Non-Arrhenius kinetics for the loop closure of a DNA hairpin.Q35886892
Mechanism for nucleic acid chaperone activity of HIV-1 nucleocapsid protein revealed by single molecule stretching.Q35931367
Kinetics of conformational fluctuations in DNA hairpin-loopsQ36206384
Conformational fluctuations in single DNA moleculesQ36590919
Conformational transitions monitored for single molecules in solutionQ36806187
Viral RNA annealing activities of human immunodeficiency virus type 1 nucleocapsid protein require only peptide domains outside the zinc fingersQ37111477
Thermodynamic basis of the enhanced specificity of structured DNA probesQ37200381
HIV-1 nucleocapsid protein as a nucleic acid chaperone: spectroscopic study of its helix-destabilizing properties, structural binding specificity, and annealing activityQ38288379
HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequenceQ38290651
Nucleic acid sequence discrimination by the HIV-1 nucleocapsid protein NCp7: a fluorescence studyQ38317314
Possible roles of HIV-1 nucleocapsid protein in the specificity of proviral DNA synthesis and in its variabilityQ38346120
The effect of mutations in the HIV-1 nucleocapsid protein on strand transfer in cell-free reverse transcription reactionsQ39543897
Sedimentation of homogeneous double-strand DNA moleculesQ40056177
Analysis of the nucleic acid annealing activities of nucleocapsid protein from HIV-1.Q40394716
Monitoring the conformational fluctuations of DNA hairpins using single-pair fluorescence resonance energy transferQ42654666
Binding of the HIV-1 nucleocapsid protein to the primer tRNA(3Lys), in vitro, is essentially not specificQ44852086
The annealing of tRNA3Lys to human immunodeficiency virus type 1 primer binding site is critically dependent on the NCp7 zinc fingers structureQ45757764
Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domainsQ45774047
P433issue3
P304page(s)691-700
P577publication date2003-02-01
P1433published inJournal of Molecular BiologyQ925779
P1476titleDestabilization of the HIV-1 complementary sequence of TAR by the nucleocapsid protein through activation of conformational fluctuations
P478volume326

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cites work (P2860)
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