| scholarly article | Q13442814 |
| P2093 | author name string | Ezequiel Petrillo | |
| Maite Saura-Sanchez | |||
| Carlos Esteban Hernando | |||
| Marcelo Javier Yanovsky | |||
| Lucas Servi | |||
| Javier Francisco Botto | |||
| Rocío Soledad Tognacca | |||
| P2860 | cites work | Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 |
| TopHat: discovering splice junctions with RNA-Seq | Q24655505 | ||
| PIL5, a phytochrome-interacting bHLH protein, regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds | Q24678001 | ||
| Light Regulates Plant Alternative Splicing through the Control of Transcriptional Elongation | Q91130138 | ||
| Coordinated Regulation of Pre-mRNA Splicing by the SFPS-RRC1 Complex to Promote Photomorphogenesis | Q91563674 | ||
| CIRCADIAN CLOCK ASSOCIATED1 transcript stability and the entrainment of the circadian clock in Arabidopsis. | Q50464789 | ||
| Transcriptional programs related to phytochrome A function in Arabidopsis seed germination. | Q50497337 | ||
| The RS domain of Arabidopsis splicing factor RRC1 is required for phytochrome B signal transduction. | Q50517355 | ||
| Light activates the degradation of PIL5 protein to promote seed germination through gibberellin in Arabidopsis. | Q50733113 | ||
| Molecular mechanisms underlying the entrance in secondary dormancy of Arabidopsis seeds. | Q53425131 | ||
| Phytochrome E Controls Light-Induced Germination of Arabidopsis | Q57831544 | ||
| Cold and Light Control Seed Germination through the bHLH Transcription Factor SPATULA | Q57933650 | ||
| Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts | Q60543455 | ||
| Light regulates alternative splicing of hydroxypyruvate reductase in pumpkin | Q74653328 | ||
| Phytochrome A Mediates the Promotion of Seed Germination by Very Low Fluences of Light and Canopy Shade Light in Arabidopsis | Q74776093 | ||
| The Induction of Seed Germination in Arabidopsis thaliana Is Regulated Principally by Phytochrome B and Secondarily by Phytochrome A | Q74789400 | ||
| Evidence for alternative splicing of MADS-box transcripts in developing cotton fibre cells | Q81455495 | ||
| The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds | Q84615026 | ||
| Light and temperature shape nuclear architecture and gene expression | Q89126426 | ||
| edgeR: a Bioconductor package for differential expression analysis of digital gene expression data | Q27860819 | ||
| Widespread intron retention in mammals functionally tunes transcriptomes | Q28652843 | ||
| Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes | Q30414157 | ||
| Intron-centric estimation of alternative splicing from RNA-seq data | Q30578196 | ||
| Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens | Q33745699 | ||
| Arabidopsis noncoding RNA mediates control of photomorphogenesis by red light. | Q33925767 | ||
| DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination | Q34120228 | ||
| HUA ENHANCER1 is involved in posttranscriptional regulation of positive and negative regulators in Arabidopsis photomorphogenesis | Q34430370 | ||
| Phytochrome controls alternative splicing to mediate light responses in Arabidopsis. | Q34832541 | ||
| Translational landscape of photomorphogenic Arabidopsis | Q35030087 | ||
| Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis. | Q35130875 | ||
| Phytochrome regulates translation of mRNA in the cytosol | Q35709132 | ||
| Widespread translational control contributes to the regulation of Arabidopsis photomorphogenesis | Q35811144 | ||
| Dynamic Light Regulation of Translation Status in Arabidopsis thaliana | Q35970819 | ||
| Regulation of gene expression by light. | Q36227445 | ||
| Alternative splicing in plants--coming of age. | Q36303822 | ||
| Phytochrome B inhibits binding of phytochrome-interacting factors to their target promoters | Q36374146 | ||
| Molecular aspects of seed dormancy | Q37079159 | ||
| Action spectra for phytochrome A- and B-specific photoinduction of seed germination in Arabidopsis thaliana | Q37465848 | ||
| Complexity of the alternative splicing landscape in plants. | Q38157823 | ||
| Sensing the light environment in plants: photoreceptors and early signaling steps | Q38338759 | ||
| Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis | Q38356330 | ||
| Alternative splicing enhances transcriptome complexity in desiccating seeds | Q38448059 | ||
| Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination. | Q41036489 | ||
| A chloroplast retrograde signal regulates nuclear alternative splicing. | Q41826208 | ||
| Let there be light: regulation of gene expression in plants. | Q41941464 | ||
| Functional analysis of splice variant expression of MADS AFFECTING FLOWERING 2 of Arabidopsis thaliana | Q42424750 | ||
| A methyl transferase links the circadian clock to the regulation of alternative splicing | Q42852303 | ||
| The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis. | Q43043822 | ||
| Seed Dormancy in Arabidopsis Requires Self-Binding Ability of DOG1 Protein and the Presence of Multiple Isoforms Generated by Alternative Splicing | Q43121547 | ||
| The Dof protein DAG1 mediates PIL5 activity on seed germination by negatively regulating GA biosynthetic gene AtGA3ox1. | Q43252640 | ||
| Translation regulation in plants: an interesting past, an exciting present and a promising future. | Q44870504 | ||
| A role for an alternative splice variant of PIF6 in the control of Arabidopsis primary seed dormancy | Q45253488 | ||
| Maize rough endosperm3 encodes an RNA splicing factor required for endosperm cell differentiation and has a nonautonomous effect on embryo development | Q45729152 | ||
| Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects | Q45812317 | ||
| Role of tomato BRANCHED1-like genes in the control of shoot branching. | Q45979499 | ||
| Acute Effects of Light on Alternative Splicing in Light-Grown Plants. | Q46008666 | ||
| Functional diversity of phytochrome family in the control of light and gibberellin-mediated germination in Arabidopsis. | Q46940098 | ||
| Alternative Splicing Substantially Diversifies the Transcriptome during Early Photomorphogenesis and Correlates with the Energy Availability in Arabidopsis. | Q48053441 | ||
| Light signaling, root development and plasticity | Q49911781 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | ImageJ | Q1659584 |
| edgeR | Q113334690 | ||
| P921 | main subject | Arabidopsis thaliana | Q158695 |
| alternative mRNA splicing, via spliceosome | Q21114084 | ||
| P304 | page(s) | 1076 | |
| P577 | publication date | 2019-09-10 | |
| P1433 | published in | Frontiers in Plant Science | Q27723840 |
| P1476 | title | Alternative Splicing Regulation During Light-Induced Germination of Arabidopsis thaliana Seeds | |
| P478 | volume | 10 |
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