| scholarly article | Q13442814 |
| P50 | author | Carolyn Gates | Q90065852 |
| Arata Hidano | Q56863047 | ||
| P2860 | cites work | Investigation of the validity of two Bayesian ancestral state reconstruction models for estimating Salmonella transmission during outbreaks | Q92072745 |
| Reconstructing a transmission network and identifying risk factors of secondary transmissions in the 2010 foot-and-mouth disease outbreak in Japan | Q92313660 | ||
| Why sold, not culled? Analysing farm and animal characteristics associated with livestock selling practices | Q92761259 | ||
| Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7 | Q57272965 | ||
| Bayesian phylodynamic inference with complex models | Q59351170 | ||
| Reconstructing foot-and-mouth disease outbreaks: a methods comparison of transmission network models | Q64082691 | ||
| Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak | Q23000449 | ||
| Zika virus in the Americas: Early epidemiological and genetic findings | Q23649767 | ||
| Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests | Q24286948 | ||
| Fast Dating Using Least-Squares Criteria and Algorithms | Q27319874 | ||
| Potential benefits of cattle vaccination as a supplementary control for bovine tuberculosis | Q27320048 | ||
| Bayesian inference of population size history from multiple loci | Q27487869 | ||
| BEAST: Bayesian evolutionary analysis by sampling trees | Q27860723 | ||
| MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space | Q27860804 | ||
| Bayesian coalescent inference of past population dynamics from molecular sequences | Q28306728 | ||
| Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data | Q28596161 | ||
| BEAST 2: a software platform for Bayesian evolutionary analysis | Q28660145 | ||
| phangorn: phylogenetic analysis in R | Q29396329 | ||
| jModelTest 2: more models, new heuristics and parallel computing | Q29546516 | ||
| Whole-genome sequencing and social-network analysis of a tuberculosis outbreak | Q29614802 | ||
| Unifying the epidemiological and evolutionary dynamics of pathogens | Q29619092 | ||
| Real-time characterization of the molecular epidemiology of an influenza pandemic | Q30352309 | ||
| bModelTest: Bayesian phylogenetic site model averaging and model comparison | Q30837787 | ||
| Data-driven network modelling of disease transmission using complete population movement data: spread of VTEC O157 in Swedish cattle | Q31121177 | ||
| Effects of contact network structure on epidemic transmission trees: implications for data required to estimate network structure | Q31161547 | ||
| Viral phylodynamics and the search for an 'effective number of infections'. | Q33891619 | ||
| Inferring epidemic contact structure from phylogenetic trees | Q34192802 | ||
| Phylodynamic reconstruction of O CATHAY topotype foot-and-mouth disease virus epidemics in the Philippines | Q34254152 | ||
| The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes | Q34285716 | ||
| Measurably evolving pathogens in the genomic era | Q34472416 | ||
| The confounding effect of population structure on Bayesian skyline plot inferences of demographic history. | Q34717951 | ||
| How the dynamics and structure of sexual contact networks shape pathogen phylogenies | Q34789253 | ||
| Phylodynamics of infectious disease epidemics | Q35006016 | ||
| Epidemiological and viral genomic sequence analysis of the 2014 ebola outbreak reveals clustered transmission | Q35221342 | ||
| New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation | Q35744008 | ||
| Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference | Q35944354 | ||
| New approaches to quantifying the spread of infection | Q36182958 | ||
| Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study | Q36298229 | ||
| Phylodynamics on local sexual contact networks | Q36325542 | ||
| Birth-death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV) | Q36512171 | ||
| Applications of Bayesian Phylodynamic Methods in a Recent U.S. Porcine Reproductive and Respiratory Syndrome Virus Outbreak | Q36527292 | ||
| The effects of sampling strategy on the quality of reconstruction of viral population dynamics using Bayesian skyline family coalescent methods: A simulation study | Q37186685 | ||
| Evolutionary analysis of the dynamics of viral infectious disease | Q37535485 | ||
| The application of genomics to tracing bacterial pathogen transmission. | Q38280754 | ||
| The Structured Coalescent and its Approximations | Q38699769 | ||
| Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison. | Q38774793 | ||
| Evaluating the efficacy of regionalisation in limiting high-risk livestock trade movements. | Q38813420 | ||
| Genome variability of foot-and-mouth disease virus during the short period of the 2010 epidemic in Japan | Q39007059 | ||
| Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen). | Q39256490 | ||
| Metadata beyond the sequence enables the phylodynamic inference of bovine viral diarrhea virus type 1a isolates from Western Canada | Q39272539 | ||
| Efficient Bayesian inference under the structured coalescent | Q42174844 | ||
| Dynamics of widespread foot-and-mouth disease virus serotypes A, O and Asia-1 in southern Asia: A Bayesian phylogenetic perspective. | Q47564394 | ||
| Epidemiology: dimensions of superspreading | Q47690120 | ||
| The influence of phylodynamic model specifications on parameter estimates of the Zika virus epidemic | Q48102374 | ||
| A Bayesian approach for inferring the dynamics of partially observed endemic infectious diseases from space-time-genetic data. | Q51102656 | ||
| On statistical tests of phylogenetic tree imbalance: the Sackin and other indices revisited. | Q51974055 | ||
| Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics. | Q52692658 | ||
| A biologist's guide to Bayesian phylogenetic analysis. | Q54339947 | ||
| P433 | issue | 1 | |
| P921 | main subject | super-spreader | Q2368081 |
| P304 | page(s) | 74 | |
| P577 | publication date | 2019-09-27 | |
| P1433 | published in | Veterinary Research | Q15761008 |
| P1476 | title | Assessing biases in phylodynamic inferences in the presence of super-spreaders | |
| P478 | volume | 50 |
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