| P50 | author | Furqan M. Fazal | Q42424921 |
| | Kevin E Wu | Q90710933 |
| P2093 | author name string | Howard Chang | |
| | James Zou | |
| | Kevin R Parker | |
| P2860 | cites work | An integrated encyclopedia of DNA elements in the human genome | Q22122150 |
| | Stabilization of Urokinase and Urokinase Receptor mRNAs by HuR Is Linked to Its Cytoplasmic Accumulation Induced by Activated Mitogen-Activated Protein Kinase-Activated Protein Kinase 2 | Q24296406 |
| | Basic local alignment search tool | Q25938991 |
| | Quantifying similarity between motifs | Q27499384 |
| | Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources | Q27860739 |
| | Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega | Q27860809 |
| | Posttranslational modification of the AU-rich element binding protein HuR by protein kinase Cdelta elicits angiotensin II-induced stabilization and nuclear export of cyclooxygenase 2 mRNA | Q28114829 |
| | Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists | Q28131785 |
| | TIA-1 and TIAR activate splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on their own pre-mRNAs | Q28213914 |
| | Multiple Transcript Properties Related to Translation Affect mRNA Degradation Rates in Saccharomyces cerevisiae | Q28596121 |
| | The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site | Q28609616 |
| | Widespread intron retention in mammals functionally tunes transcriptomes | Q28652843 |
| | Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 | Q29547403 |
| | Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing | Q29547470 |
| | RNA and disease | Q29615183 |
| | Quantifying the relationship between sequence and three-dimensional structure conservation in RNA. | Q30390338 |
| | In the right place at the right time: visualizing and understanding mRNA localization. | Q30656002 |
| | rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data | Q30875027 |
| | A novel RNA motif mediates the strict nuclear localization of a long noncoding RNA | Q33743594 |
| | Alternative splicing regulates distinct subcellular localization of Epithelial splicing regulatory protein 1 (Esrp1) isoforms | Q33818801 |
| | A compendium of RNA-binding motifs for decoding gene regulation. | Q34357005 |
| | mRNA localization: gene expression in the spatial dimension | Q34951203 |
| | LIN28A Modulates Splicing and Gene Expression Programs in Breast Cancer Cells | Q35963802 |
| | The role of the 3' untranslated region in mRNA sorting to the vicinity of mitochondria is conserved from yeast to human cells | Q35973690 |
| | Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention | Q36020880 |
| | Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A. | Q36165982 |
| | Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks | Q37076984 |
| | To localize or not to localize: mRNA fate is in 3'UTR ends | Q37588945 |
| | The influence of dynein processivity control, MAPs, and microtubule ends on directional movement of a localising mRNA. | Q37700554 |
| | Axonal mRNA localization and local protein synthesis in nervous system assembly, maintenance and repair | Q38002309 |
| | Alternative splicing affects the subcellular localization of Drosha | Q38770496 |
| | HuR regulates alternative splicing of the TRA2β gene in human colon cancer cells under oxidative stress. | Q38991122 |
| | Dynamic RNA Modifications in Gene Expression Regulation | Q39378718 |
| | RNA localization: Making its way to the center stage | Q39384171 |
| | PTBP1 and PTBP2 Serve Both Specific and Redundant Functions in Neuronal Pre-mRNA Splicing | Q42775149 |
| | CeFra-seq reveals broad asymmetric mRNA and noncoding RNA distribution profiles in Drosophila and human cells | Q46272972 |
| | Hu antigen R (HuR) functions as an alternative pre-mRNA splicing regulator of Fas apoptosis-promoting receptor on exon definition | Q46607486 |
| | Dynein anchors its mRNA cargo after apical transport in the Drosophila blastoderm embryo | Q47070757 |
| | Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. | Q48077109 |
| | The lncLocator: a subcellular localization predictor for long non-coding RNAs based on a stacked ensemble classifier | Q50026662 |
| | Alternative 3' UTRs Modify the Localization, Regulatory Potential, Stability, and Plasticity of mRNAs in Neuronal Compartments. | Q52587546 |
| | RNA localization regulates diverse and dynamic cellular processes. | Q53411412 |
| | What Are 3' UTRs Doing? | Q57161141 |
| | Prediction of LncRNA Subcellular Localization with Deep Learning from Sequence Features | Q58608744 |
| | Sequences enriched in Alu repeats drive nuclear localization of long RNAs in human cells | Q59064757 |
| | A primer on deep learning in genomics | Q64120751 |
| | Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments. | Q64942963 |
| | Intron retention is a source of neoepitopes in cancer. | Q64990890 |
| | Prediction of mRNA subcellular localization using deep recurrent neural networks | Q90064999 |
| | Predictive models of subcellular localization of long RNAs | Q91467408 |
| | Atlas of Subcellular RNA Localization Revealed by APEX-Seq | Q92967184 |
| | SRSF1 and RBM4 differentially modulate the oncogenic effect of HIF-1α in lung cancer cells through alternative splicing mechanism | Q93151675 |
| P577 | publication date | 2020-03-27 | |
| P1433 | published in | RNA | Q7277164 |
| P1476 | title | RNA-GPS predicts high-resolution RNA subcellular localization and highlights the role of splicing | |