Regulation of auxin transcriptional responses

scientific article published on 14 December 2019

Regulation of auxin transcriptional responses is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1002/DVDY.139
P698PubMed publication ID31774605

P50authorLucia C. StraderQ87894114
P2093author name stringSamantha K Powers
P2860cites workDimerization and DNA binding of auxin response factorsQ47931239
DORNROSCHEN is a direct target of the auxin response factor MONOPTEROS in the Arabidopsis embryoQ48002195
Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens.Q48114438
A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development.Q49099386
Mutational studies of the Aux/IAA proteins in Physcomitrella reveal novel insights into their function.Q50422518
Deletion of MP/ARF5 domains III and IV reveals a requirement for Aux/IAA regulation in Arabidopsis leaf vascular patterning.Q50502832
Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling.Q50581561
Role of the Arabidopsis RING-H2 protein RBX1 in RUB modification and SCF function.Q52115172
Origin and evolution of the nuclear auxin response system.Q55091121
Auxin sensing is a property of an unstructured domain in the Auxin Response Factor ETTIN of Arabidopsis thalianaQ57159197
The DNA binding landscape of the maize AUXIN RESPONSE FACTOR familyQ58097668
Aux/IAA proteins are phosphorylated by phytochrome in vitroQ73295022
How does auxin turn on genes?Q77388402
TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesisQ80656858
The Arabidopsis transcription factor MYB77 modulates auxin signal transductionQ80735875
Plant development is regulated by a family of auxin receptor F box proteinsQ81916467
Identical amino acid substitutions in the repression domain of auxin/indole-3-acetic acid proteins have contrasting effects on auxin signalingQ83253718
Auxin sensitivities of all Arabidopsis Aux/IAAs for degradation in the presence of every TIR1/AFBQ87991206
Cistrome and Epicistrome Features Shape the Regulatory DNA LandscapeQ88300878
Evolution of the Auxin Response Factors from charophyte ancestorsQ90280022
Root branching toward water involves posttranslational modification of transcription factor ARF7Q90680830
Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular CondensatesQ91223425
Nucleo-cytoplasmic Partitioning of ARF Proteins Controls Auxin Responses in Arabidopsis thalianaQ92675990
Classification of intrinsically disordered regions and proteinsQ22061736
The roles of auxin response factor domains in auxin-responsive transcriptionQ24541418
Auxin biosynthesis and its role in plant developmentQ24627376
Up in the air: Untethered Factors of Auxin ResponseQ26766092
Mechanism of auxin perception by the TIR1 ubiquitin ligaseQ27644361
Molecular basis for AUXIN RESPONSE FACTOR protein interaction and the control of auxin response repressionQ27683029
Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factorsQ27689036
Structural basis for oligomerization of auxin transcriptional regulatorsQ27690018
The F-box protein TIR1 is an auxin receptorQ28253006
Rapid degradation of auxin/indoleacetic acid proteins requires conserved amino acids of domain II and is proteasome dependentQ28361286
Variation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction.Q30313118
Rate Motifs Tune Auxin/Indole-3-Acetic Acid Degradation DynamicsQ30316405
Auxin-induced degradation dynamics set the pace for lateral root developmentQ30316805
Structural basis for the auxin-induced transcriptional regulation by Aux/IAA17.Q30369814
Defining a two-pronged structural model for PB1 (Phox/Bem1p) domain interaction in plant auxin responses.Q30373364
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Meta-analysis of transcriptome data identified TGTCNN motif variants associated with the response to plant hormone auxin in Arabidopsis thaliana L.Q31086332
Arabidopsis AXR6 encodes CUL1 implicating SCF E3 ligases in auxin regulation of embryogenesisQ33338534
MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factorQ33348735
Hormonal control of the shoot stem-cell nicheQ33349308
Spatio-temporal sequence of cross-regulatory events in root meristem growth.Q33350269
The auxin signalling network translates dynamic input into robust patterning at the shoot apexQ33351726
AUXIN RESPONSE FACTOR7 restores the expression of auxin-responsive genes in mutant Arabidopsis leaf mesophyll protoplastsQ46516529
Auxin Response Factors: output control in auxin biologyQ47907858
A cellular expression map of the Arabidopsis AUXIN RESPONSE FACTOR gene familyQ33351973
A molecular framework for auxin-mediated initiation of flower primordiaQ33355213
A bHLH complex controls embryonic vascular tissue establishment and indeterminate growth in ArabidopsisQ33355312
Cytokinin signalling inhibitory fields provide robustness to phyllotaxisQ33357355
Plant development. Genetic control of distal stem cell fate within root and embryonic meristemsQ33359896
PHABULOSA Mediates an Auxin Signaling Loop to Regulate Vascular Patterning in ArabidopsisQ33362034
Complex regulation of the TIR1/AFB family of auxin receptorsQ33564209
Cell elongation is regulated through a central circuit of interacting transcription factors in the Arabidopsis hypocotylQ33822783
Auxin modulates the degradation rate of Aux/IAA proteinsQ33944938
Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteinsQ34102315
The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.Q34263380
ARF1, a transcription factor that binds to auxin response elementsQ34429300
Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.Q34554335
Auxin: regulation, action, and interaction.Q34555744
The Arabidopsis F-box protein TIR1 is an auxin receptorQ34557948
Auxin transport routes in plant developmentQ34610256
Auxin perception--structural insightsQ34619941
Auxin-responsive gene expression: genes, promoters and regulatory factorsQ34660589
Genetics of Aux/IAA and ARF action in plant growth and development.Q34660594
Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in ArabidopsisQ34762914
Diversity and specificity: auxin perception and signaling through the TIR1/AFB pathwayQ34957708
The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1pQ35188352
Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thalianaQ35200713
A modular analysis of the auxin signalling networkQ35586214
Solution structure of the PsIAA4 oligomerization domain reveals interaction modes for transcription factors in early auxin responseQ35616386
Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorphaQ35645043
ETTIN (ARF3) physically interacts with KANADI proteins to form a functional complex essential for integument development and polarity determination in ArabidopsisQ35768075
Untethering the TIR1 auxin receptor from the SCF complex increases its stability and inhibits auxin responseQ35903319
A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin.Q35903404
Phase transitions in the assembly of multivalent signalling proteinsQ35932499
Refining the nuclear auxin response pathway through structural biologyQ36200276
Structural basis for recognition of diverse transcriptional repressors by the TOPLESS family of corepressors.Q36284745
Activation and repression of transcription by auxin-response factorsQ36373022
Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2.Q36775377
Auxin response factorsQ36953926
Auxin biosynthesis and storage forms.Q36963883
Convergence of auxin and gibberellin signaling on the regulation of the GATA transcription factors GNC and GNL in Arabidopsis thalianaQ37088665
Groucho/Tup1 family co-repressors in plant developmentQ37100042
Isolation and characterization of cul1-7, a recessive allele of CULLIN1 that disrupts SCF function at the C terminus of CUL1 in Arabidopsis thalianaQ37117063
Functional analysis of molecular interactions in synthetic auxin response circuitsQ37322914
Reconstruction of protein networks from an atlas of maize seed proteotypes.Q37377521
Control of cytokinin and auxin homeostasis in cyanobacteria and algaeQ37567974
Mechanism of auxin-regulated gene expression in plantsQ37580924
Defining auxin response contexts in plant developmentQ37639756
Getting a grasp on domain III/IV responsible for Auxin Response Factor-IAA protein interactionsQ38011382
SCFTIR1/AFB-based auxin perception: mechanism and role in plant growth and developmentQ38325625
The PB1 domain in auxin response factor and Aux/IAA proteins: a versatile protein interaction module in the auxin response.Q38325629
Integration of omic networks in a developmental atlas of maize.Q38443626
Defining binding efficiency and specificity of auxins for SCF(TIR1/AFB)-Aux/IAA co-receptor complex formationQ38483257
A new CULLIN 1 mutant has altered responses to hormones and light in ArabidopsisQ38507732
Transcriptional Responses to the Auxin Hormone.Q38746449
Biomolecular condensates: organizers of cellular biochemistryQ39146409
Cell-free formation of RNA granules: bound RNAs identify features and components of cellular assemblies.Q39349822
A synthetic approach reveals extensive tunability of auxin signalingQ39578011
Inference of the Arabidopsis lateral root gene regulatory network suggests a bifurcation mechanism that defines primordia flanking and central zonesQ40973379
Lysine Residues Are Not Required for Proteasome-Mediated Proteolysis of the Auxin/Indole Acidic Acid Protein IAA1.Q41048677
Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin Signaling in ArabidopsisQ41066859
Phase transition of a disordered nuage protein generates environmentally responsive membraneless organellesQ41277254
Degradation of Aux/IAA proteins is essential for normal auxin signallingQ41729471
The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsivenessQ42491105
TOPLESS regulates apical embryonic fate in ArabidopsisQ42496617
Nitric oxide influences auxin signaling through S-nitrosylation of the Arabidopsis TRANSPORT INHIBITOR RESPONSE 1 auxin receptorQ42549276
Evolution of the ARF gene family in land plants: old domains, new tricks.Q42668023
Constitutive auxin response in Physcomitrella reveals complex interactions between Aux/IAA and ARF proteinsQ42746209
Regulation of ubiquitin chain initiation to control the timing of substrate degradation.Q42778545
The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes.Q43110908
Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate.Q43227050
Regulation of preprocambial cell state acquisition by auxin signaling in Arabidopsis leaves.Q43285337
AUXIN RESPONSE FACTOR8 regulates Arabidopsis petal growth by interacting with the bHLH transcription factor BIGPETALpQ43493891
Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.Q43817620
Degradation of the auxin response factor ARF1.Q44314119
Acceleration of Aux/IAA proteolysis is specific for auxin and independent of AXR1.Q44530146
Auxin action in a cell-free systemQ44558578
The TOPLESS interactome: a framework for gene repression in ArabidopsisQ44669256
P433issue4
P304page(s)483-495
P577publication date2019-12-14
P1433published inDevelopmental DynamicsQ59752
P1476titleRegulation of auxin transcriptional responses
P478volume249

Reverse relations

cites work (P2860)
Q99237670A Gain-of-Function Mutant of IAA15 Inhibits Lateral Root Development by Transcriptional Repression of LBD Genes in Arabidopsis
Q89719825Auxin-Abscisic Acid Interactions in Plant Growth and Development
Q92139593GAL4/GFP Enhancer-Trap Lines for Identification and Manipulation of Cells and Tissues in Developing Arabidopsis Leaves
Q89834608Molecular Evidences for the Interactions of Auxin, Gibberellin, and Cytokinin in Bent Peduncle Phenomenon in Rose (Rosa sp.).

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