A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions

scientific article published on 03 July 2019

A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2019SciA....5.8391W
P356DOI10.1126/SCIADV.AAV8391
P932PMC publication ID6609165
P698PubMed publication ID31281883

P50authorAndrea MinutiQ38639552
John L. WilliamsQ41661485
Aurélie BoninQ43135713
Filippo BiscariniQ47164092
Pierre TaberletQ47174448
Francesco StrozziQ48975658
Frédéric BoyerQ56941338
Jakub MrazekQ56944302
Jan KopečnýQ56944324
Jim CraigonQ57306628
Emma GregsonQ58193460
Erminio TrevisiQ58226008
Phil C GarnsworthyQ58450103
Fotini KokouQ59688541
Johanna VilkkiQ63112026
Ilma TapioQ79444481
Fiorenzo Piccioli CappelliQ80574857
Tim J SnellingQ83164418
Cesar Silvino Pinares PatiñoQ83710316
Alireza BayatQ86528930
Itzhak MizrahiQ90243016
Pekka HuhtanenQ91482897
Robert WallaceQ91693606
Paolo BaniQ91693614
Neil SaundersQ91693621
Maria L CallegariQ91693627
Kateřina O FliegerováQ91693633
Hana SechovcováQ91693639
Edward Hernando Cabezas-GarciaQ130296687
P2093author name stringKevin J Shingfield
Eran Halperin
Goor Sasson
Sarah L Potterton
P2860cites workMAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transformQ24540347
QIIME allows analysis of high-throughput community sequencing dataQ24616873
Structure of the archaeal community of the rumenQ24647099
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
The Role of Ciliate Protozoa in the RumenQ26774698
Manipulating rumen microbiome and fermentation through interventions during early life: a reviewQ26777214
Anaerobic fungi (phylum Neocallimastigomycota): advances in understanding their taxonomy, life cycle, ecology, role and biotechnological potentialQ26865205
Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene AbundanceQ27309133
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and UsabilityQ27860817
Oral Administration of Faecalibacterium prausnitzii Decreased the Incidence of Severe Diarrhea and Related Mortality Rate and Increased Weight Gain in Preweaned Dairy HeifersQ28603476
Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical rangeQ28606606
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Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminantsQ28817671
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Common SNPs explain a large proportion of the heritability for human heightQ29547221
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16S rDNA library-based analysis of ruminal bacterial diversityQ30772181
Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitziiQ33347944
Long-term monensin supplementation does not significantly affect the quantity or diversity of methanogens in the rumen of the lactating dairy cow.Q33386649
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Optimally weighted Z-test is a powerful method for combining probabilities in meta-analysis.Q35103333
Internal transcribed spacer 1 secondary structure analysis reveals a common core throughout the anaerobic fungi (Neocallimastigomycota).Q35129326
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Rumen microbiome from steers differing in feed efficiencyQ35648483
The rumen microbial metagenome associated with high methane production in cattleQ35818179
Rumen microbial communities influence metabolic phenotypes in lambsQ36147354
The ruminal microbiome associated with methane emissions from ruminant livestockQ37593793
Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow's Capacity To Harvest Energy from Its FeedQ38623193
Non-invasive individual methane measurement in dairy cowsQ39071342
Bovine haptoglobin response in clinically defined field conditionsQ40751724
Comparison of methods to determine methane emissions from dairy cows in farm conditionsQ41223504
GAPIT: genome association and prediction integrated toolQ43618010
Variation among individual dairy cows in methane measurements made on farm during milkingQ43758979
Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria.Q44616161
Improved extraction of PCR-quality community DNA from digesta and fecal samplesQ44902635
Genomic heritabilities and genomic estimated breeding values for methane traits in Angus cattle.Q50670373
Hydrogen and methane emissions from beef cattle and their rumen microbial community vary with diet, time after feeding and genotype.Q51726919
Development of an assay to quantify rumen ciliate protozoal biomass in cows using real-time PCR.Q54691349
Influence of cabbage processing methods and prebiotic manipulationof colonic microflora on glucosinolate breakdown in manQ64452373
Nitrogen metabolism in the rumenQ70362938
Factors affecting the rate of breakdown of bacterial protein in rumen fluidQ70365750
The persistence of bacterial and methanogenic archaeal communities residing in the rumen of young lambsQ83199940
On-farm methane measurements during milking correlate with total methane production by individual dairy cowsQ84184549
Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for HeritabilityQ89187019
Random ForestsQ115707260
P433issue7
P304page(s)eaav8391
P577publication date2019-07-03
P1433published inScience AdvancesQ19881044
P1476titleA heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions
P478volume5

Reverse relations

cites work (P2860)
Q94521649Bayesian modeling reveals host genetics associated with rumen microbiota jointly influence methane emission in dairy cows
Q97883407Comparative Microbiome Analysis Reveals the Ecological Relationships Between Rumen Methanogens, Acetogens, and Their Hosts
Q92656375Identification of rumen microbial biomarkers linked to methane emission in Holstein dairy cows
Q100514908Infectious Diseases, Livestock, and Climate: A Vicious Cycle?
Q99551246Influence of host genetics in shaping the rumen bacterial community in beef cattle
Q99418561Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber
Q96682401Review: Genetic and genomic selection as a methane mitigation strategy in dairy cattle
Q98216834Rumen metaproteomics: closer to linking rumen microbial function to animal productivity traits
Q92092743Stochasticity constrained by deterministic effects of diet and age drive rumen microbiome assembly dynamics
Q93213500Symposium review: Genomic selection for reducing environmental impact and adapting to climate change

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