Comparative de novo transcriptomics and untargeted metabolomic analyses elucidate complicated mechanisms regulating celery (Apium graveolens L.) responses to selenium stimuli

scientific article published on 30 December 2019

Comparative de novo transcriptomics and untargeted metabolomic analyses elucidate complicated mechanisms regulating celery (Apium graveolens L.) responses to selenium stimuli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PONE.0226752
P932PMC publication ID6936847
P698PubMed publication ID31887119

P50authorChenliang YuQ61100910
P2093author name stringCheng-Ri Zhao
Chenghao Zhang
Junwei Sun
Baoyu Xu
Qixian Lai
P2860cites workAntioxidant potential of intermediates in phenylpropanoid metabolism in higher plantsQ71889951
Selenium metabolomics in yeast using complementary reversed-phase/hydrophilic ion interaction (HILIC) liquid chromatography-electrospray hybrid quadrupole trap/Orbitrap mass spectrometryQ85597672
OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.).Q87815060
Untargeted metabolomics reveals predominant alterations in primary metabolites of broccoli sprouts in response to pre-harvest selenium treatmentQ90212543
OsPT2, a phosphate transporter, is involved in the active uptake of selenite in riceQ43090945
Phytoremediation of selenium by two helophyte species in subsurface flow constructed wetlandQ43360244
A comparison of sulfate and selenium accumulation in relation to the expression of sulfate transporter genes in Astragalus speciesQ44102362
Phytoremediation management of selenium-laden drainage sediments in the San Luis Drain: a greenhouse feasibility studyQ44350946
Coordinated expression of sulfate uptake and components of the sulfate assimilatory pathway in maizeQ44973793
Allium cepa L. Response to Sodium Selenite (Se(IV)) Studied in Plant Roots by a LC-MS-Based Proteomic Approach.Q46372653
Analysis of sulfur and selenium assimilation in Astragalus plants with varying capacities to accumulate seleniumQ46532785
Transcriptome analyses give insights into selenium-stress responses and selenium tolerance mechanisms in Arabidopsis.Q46770713
Comparative proteomic analysis provides novel insights into chlorophyll biosynthesis in celery under temperature stress.Q48000507
Transcriptome analysis of differentially expressed genes involved in selenium accumulation in tea plant (Camellia sinensis).Q55099948
Randomized controlled trial of the effect of selenium supplementation on thyroid function in the elderly in the United KingdomQ57539367
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Metabolomics – the link between genotypes and phenotypesQ28540942
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2Q29547403
Selenium accumulation by plants.Q30379117
Functional characterization of a gene encoding a fourth ATP sulfurylase isoform from Arabidopsis thalianaQ30870057
Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabularyQ33213845
SA, JA, ethylene, and disease resistance in plantsQ33538828
Gene ontology analysis for RNA-seq: accounting for selection biasQ33861598
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A tale of two toxicities: malformed selenoproteins and oxidative stress both contribute to selenium stress in plantsQ34361044
Characterization of selenium incorporation into wheat proteins by two-dimensional gel electrophoresis-laser ablation ICP MS followed by capillary HPLC-ICP MS and electrospray linear trap quadrupole Orbitrap MS.Q34553800
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A comparative study of the Se/S substitution in methionine and cysteine in Se-enriched yeast using an inductively coupled plasma mass spectrometry (ICP MS)-assisted proteomics approachQ34736387
De novo assembly, transcriptome characterization, lignin accumulation, and anatomic characteristics: novel insights into lignin biosynthesis during celery leaf developmentQ35051060
OsARF16 is involved in cytokinin-mediated inhibition of phosphate transport and phosphate signaling in rice (Oryza sativa L.).Q35410211
Small RNA and degradome sequencing reveals important microRNA function in Astragalus chrysochlorus response to selenium stimuliQ35638621
De Novo Transcriptome Assembly and Comparative Analysis Elucidate Complicated Mechanism Regulating Astragalus chrysochlorus Response to Selenium StimuliQ35797471
Identification of SSRs and differentially expressed genes in two cultivars of celery (Apium graveolens L.) by deep transcriptome sequencingQ35822397
Selenium geochemistry and healthQ36780022
Comparative analysis of the transcriptomes and primary metabolite profiles of adventitious roots of five Panax ginseng cultivars.Q37575665
Flavonoids as antioxidants in plants: location and functional significanceQ38047157
Hormonal control of sulfate uptake and assimilationQ38711506
Advances in the research of celery, an important Apiaceae vegetable cropQ39250931
Involvement of endogenous salicylic acid in iron-deficiency responses in ArabidopsisQ39747348
The effect of hydro-alcoholic celery (Apiumgraveolens) leaf extract on cardiovascular parameters and lipid profile in animal model of hypertension induced by fructoseQ40809180
Selenate-resistant mutants of Arabidopsis thaliana identify Sultr1;2, a sulfate transporter required for efficient transport of sulfate into rootsQ42517447
Involvement of silicon influx transporter OsNIP2;1 in selenite uptake in riceQ43055352
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesDESeq2Q113018293
P433issue12
P921main subjectApium graveolensQ28298
plant metabolomeQ129168692
transcriptomicsQ28946449
P304page(s)e0226752
P577publication date2019-12-30
P1433published inPLOS OneQ564954
P1476titleComparative de novo transcriptomics and untargeted metabolomic analyses elucidate complicated mechanisms regulating celery (Apium graveolens L.) responses to selenium stimuli
P478volume14

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