Transcriptional and Post-transcriptional Regulation of Lignin Biosynthesis Pathway Genes in Populus

scientific article published on 25 May 2020

Transcriptional and Post-transcriptional Regulation of Lignin Biosynthesis Pathway Genes in Populus is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3389/FPLS.2020.00652
P932PMC publication ID7262965
P698PubMed publication ID32528504

P50authorGerald A TuskanQ38590804
P2093author name stringJin Zhang
Jin-Gui Chen
Timothy J Tschaplinski
Wellington Muchero
P2860cites workRNA maps reveal new RNA classes and a possible function for pervasive transcriptionQ29614334
Lignin modification improves fermentable sugar yields for biofuel productionQ29616683
The developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa (black cottonwood) populationsQ30431197
Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus.Q31058328
Novel and stress-regulated microRNAs and other small RNAs from ArabidopsisQ31095568
MiR397b regulates both lignin content and seed number in Arabidopsis via modulating a laccase involved in lignin biosynthesisQ33358703
Coordinated transcriptional regulation of two key genes in the lignin branch pathway--CAD and CCR--is mediated through MYB- binding sitesQ33618427
The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in Populus tomentosaQ33811182
Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in ArabidopsisQ33925419
Syringyl lignin biosynthesis is directly regulated by a secondary cell wall master switchQ34069570
The MYB46/MYB83-mediated transcriptional regulatory programme is a gatekeeper of secondary wall biosynthesis.Q34331465
Mutation of WRKY transcription factors initiates pith secondary wall formation and increases stem biomass in dicotyledonous plantsQ34438455
Characterization of microRNAs expressed during secondary wall biosynthesis in Acacia mangiumQ34515539
The heterologous expression in Arabidopsis thaliana of sorghum transcription factor SbbHLH1 downregulates lignin synthesisQ34734641
Conservation and functional influence of alternative splicing in wood formation of Populus and EucalyptusQ34874403
MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in ArabidopsisQ34914934
Functional characterization of the poplar R2R3-MYB transcription factor PtoMYB216 involved in the regulation of lignin biosynthesis during wood formationQ35034649
Arabidopsis NAC domain proteins, VND1 to VND5, are transcriptional regulators of secondary wall biosynthesis in vesselsQ35229793
New routes for lignin biosynthesis defined by biochemical characterization of recombinant ferulate 5-hydroxylase, a multifunctional cytochrome P450-dependent monooxygenase.Q35613698
Exploring lignification in conifers by silencing hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase in Pinus radiataQ35880295
The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathwaysQ35970894
Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpaQ36221697
PtrWRKY19, a novel WRKY transcription factor, contributes to the regulation of pith secondary wall formation in Populus trichocarpaQ36512140
Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpaQ36967636
Lignin engineeringQ37146889
PtoMYB156 is involved in negative regulation of phenylpropanoid metabolism and secondary cell wall biosynthesis during wood formation in poplarQ37602098
Genome-wide identification of novel long non-coding RNAs in Populus tomentosa tension wood, opposite wood and normal wood xylem by RNA-seq.Q38472436
AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula.Q38706186
The phenylpropanoid pathway in ArabidopsisQ40735831
An ethylene response-related factor, GbERF1-like, from Gossypium barbadense improves resistance to Verticillium dahliae via activating lignin synthesisQ40757829
Post-transcriptional regulation of nuclear-encoded genes in higher plants: the roles of mRNA stability and translationQ40806927
MYB46 directly regulates the gene expression of secondary wall-associated cellulose synthases in ArabidopsisQ40901867
The grapevine transcription factor WRKY2 influences the lignin pathway and xylem development in tobaccoQ43245201
Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in ArabidopsisQ43937171
A new Arabidopsis thaliana mutant deficient in the expression of O-methyltransferase impacts lignins and sinapoyl estersQ44459969
Genome-wide characterization of the lignification toolbox in ArabidopsisQ44652208
Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpaQ44876581
Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolismQ45065718
Intron-mediated alternative splicing of WOOD-ASSOCIATED NAC TRANSCRIPTION FACTOR1B regulates cell wall thickening during fiber development in Populus speciesQ46950457
PtoMYB170 positively regulates lignin deposition during wood formation in poplar and confers drought tolerance in transgenic ArabidopsisQ47854709
MYB103 is required for FERULATE-5-HYDROXYLASE expression and syringyl lignin biosynthesis in Arabidopsis stems.Q48046335
SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of ArabidopsisQ48083369
Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.).Q50589433
EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar.Q52604403
TGMI: an efficient algorithm for identifying pathway regulators through evaluation of triple-gene mutual interaction.Q52630976
MicroRNA528 Affects Lodging Resistance of Maize by Regulating Lignin Biosynthesis under Nitrogen-Luxury Conditions.Q53700242
Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks.Q54351035
Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis.Q55054085
Regulation of Lignin Biosynthesis and Its Role in Growth-Defense TradeoffsQ57490254
Recent Advances in the Transcriptional Regulation of Secondary Cell Wall Biosynthesis in the Woody PlantsQ58573792
Genome-wide association studies and expression-based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense-responsive transcription factors in PopulusQ60530739
4-Coumarate 3-hydroxylase in the lignin biosynthesis pathway is a cytosolic ascorbate peroxidaseQ64079875
Hierarchical Transcription Factor and Chromatin Binding Network for Wood Formation in Black Cottonwood ()Q64234767
Eucalyptus gunnii CCR and CAD2 promoters are active in lignifying cells during primary and secondary xylem formation in Arabidopsis thalianaQ79362405
MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesQ83131843
The poplar MYB transcription factors, PtrMYB3 and PtrMYB20, are involved in the regulation of secondary wall biosynthesisQ84126227
MicroR828 regulates lignin and H2O2 accumulation in sweet potato on woundingQ84893711
Functional characterization of poplar wood-associated NAC domain transcription factorsQ84991219
Global Analysis of Direct Targets of Secondary Wall NAC Master Switches in ArabidopsisQ85175997
Identification of direct targets of transcription factor MYB46 provides insights into the transcriptional regulation of secondary wall biosynthesisQ87988164
A 5-Enolpyruvylshikimate 3-Phosphate Synthase Functions as a Transcriptional Repressor in PopulusQ89068641
MicroRNA858 Is a Potential Regulator of Phenylpropanoid Pathway and Plant DevelopmentQ89253091
Wood Transcriptome Profiling Identifies Critical Pathway Genes of Secondary Wall Biosynthesis and Novel Regulators for Vascular Cambium Development in PopulusQ89996055
PdWND3A, a wood-associated NAC domain-containing protein, affects lignin biosynthesis and composition in PopulusQ91229308
MYB20, MYB42, MYB43, and MYB85 Regulate Phenylalanine and Lignin Biosynthesis during Secondary Cell Wall FormationQ92216735
Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop PopulusQ93194899
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P921main subjectlignin biosynthetic processQ22283291
P304page(s)652
P577publication date2020-05-25
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleTranscriptional and Post-transcriptional Regulation of Lignin Biosynthesis Pathway Genes in Populus
P478volume11

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