| P50 | author | Alexander Suh | Q30502986 |
| | Vera M Warmuth | Q91000838 |
| | Wieland Heim | Q92647236 |
| | Fritz Sedlazeck | Q42818186 |
| | Valentina Peona | Q57027209 |
| | Ulrich Knief | Q57649990 |
| | Matthias H Weissensteiner | Q87710010 |
| P2093 | author name string | Kees-Jan Francoijs | |
| | Ignas Bunikis | |
| | Ana Catalán | |
| | Saurabh D Pophaly | |
| | Jochen B W Wolf | |
| P2860 | cites work | LUMPY: a probabilistic framework for structural variant discovery. | Q21999523 |
| | The genomic landscape underlying phenotypic integrity in the face of gene flow in crows | Q22065594 |
| | Structural variation in the human genome | Q22122017 |
| | DELLY: structural variant discovery by integrated paired-end and split-read analysis | Q24605418 |
| | Versatile and open software for comparing large genomes | Q24807126 |
| | Basic local alignment search tool | Q25938991 |
| | Genetic variation and the de novo assembly of human genomes | Q26786788 |
| | Natural selection constrains neutral diversity across a wide range of species | Q27312430 |
| | The Sequence Alignment/Map format and SAMtools | Q27860966 |
| | Comprehensive mapping of long-range interactions reveals folding principles of the human genome | Q28131819 |
| | Evolution of heterogeneous genome differentiation across multiple contact zones in a crow species complex | Q28314914 |
| | Fast and accurate long-read alignment with Burrows-Wheeler transform | Q29547193 |
| | Recent developments in the MAFFT multiple sequence alignment program | Q29547333 |
| | Repbase Update, a database of eukaryotic repetitive elements | Q29547460 |
| | The variant call format and VCFtools | Q29614172 |
| | A unified classification system for eukaryotic transposable elements | Q29617222 |
| | Fitting Linear Mixed-Effects Models Using lme4 | Q30477923 |
| | A high-performance computing toolset for relatedness and principal component analysis of SNP data | Q30573123 |
| | Regulatory activities of transposable elements: from conflicts to benefits | Q33874818 |
| | Phased diploid genome assembly with single-molecule real-time sequencing. | Q33887832 |
| | Microsatellite mutations in the germline: implications for evolutionary inference | Q34096157 |
| | A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution | Q34111313 |
| | BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs | Q34480034 |
| | The population genetics of structural variants in grapevine domestication | Q90045860 |
| | How complete are "complete" genome assemblies?-An avian perspective | Q90408775 |
| | Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits | Q90950275 |
| | Structural variation in the sequencing era | Q91292211 |
| | In situ quantification of individual mRNA transcripts in melanocytes discloses gene regulation of relevance to speciation | Q91339977 |
| | A transposable element insertion is associated with an alternative life history strategy | Q92058688 |
| | Going beyond SNPs: The role of structural genomic variants in adaptive evolution and species diversification | Q92134113 |
| | Transposition favors the generation of large effect mutations that may facilitate rapid adaption | Q92321651 |
| | Epistatic mutations under divergent selection govern phenotypic variation in the crow hybrid zone | Q92615289 |
| | Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast | Q92934785 |
| | Evaluation of computational genotyping of structural variation for clinical diagnoses | Q93172819 |
| | Determinants of genetic variation across eco-evolutionary scales in pinnipeds | Q96230961 |
| | Population and sex differences in Drosophila melanogaster brain gene expression | Q34484178 |
| | A supergene determines highly divergent male reproductive morphs in the ruff | Q34501835 |
| | Coming of age: ten years of next-generation sequencing technologies | Q34526801 |
| | The industrial melanism mutation in British peppered moths is a transposable element | Q34529231 |
| | A supermatrix phylogeny of corvoid passerine birds (Aves: Corvides). | Q35761153 |
| | Retrotransposition creates sloping shores: a graded influence of hypomethylated CpG islands on flanking CpG sites | Q35876041 |
| | Chromosome-scale shotgun assembly using an in vitro method for long-range linkage | Q35915257 |
| | Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast | Q36258476 |
| | The standing pool of genomic structural variation in a natural population of Mimulus guttatus | Q37557685 |
| | Genome structural variation discovery and genotyping | Q37848057 |
| | Transcriptomics of colour patterning and coloration shifts in crows | Q38387355 |
| | Human Structural Variation: Mechanisms of Chromosome Rearrangements | Q38553771 |
| | Making sense of genomic islands of differentiation in light of speciation | Q38795762 |
| | Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications. | Q38866237 |
| | A genomic view of short tandem repeats | Q38954705 |
| | BCFtools/csq: haplotype-aware variant consequences | Q38958131 |
| | Evolution of bird genomes-a transposon's-eye view. | Q39044606 |
| | Assemblytics: a web analytics tool for the detection of variants from an assembly. | Q39673227 |
| | Manta: rapid detection of structural variants and indels for germline and cancer sequencing applications. | Q40231918 |
| | Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution. | Q40984243 |
| | An Incomplete Understanding of Human Genetic Variation | Q42728579 |
| | ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE. | Q44872734 |
| | Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes | Q46254933 |
| | Hidden genetic variation shapes the structure of functional elements in Drosophila. | Q47573976 |
| | Piercing the dark matter: bioinformatics of long-range sequencing and mapping. | Q51164367 |
| | Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon | Q56534801 |
| | Accurate detection of complex structural variations using single-molecule sequencing | Q57046462 |
| | A High-Quality, Long-Read De Novo Genome Assembly to Aid Conservation of Hawaii's Last Remaining Crow Species | Q58805133 |
| | The evolutionary dynamics of repetitive DNA in eukaryotes | Q59090793 |
| | High-resolution comparative analysis of great ape genomes | Q60531027 |
| | Multi-platform discovery of haplotype-resolved structural variation in human genomes | Q63432936 |
| | Genome maps across 26 human populations reveal population-specific patterns of structural variation | Q64069052 |
| | On the estimation of the insertion time of LTR retrotransposable elements | Q84972401 |
| | Polymorphism Data Assist Estimation of the Nonsynonymous over Synonymous Fixation Rate Ratio ω for Closely Related Species | Q90029427 |
| P433 | issue | 1 | |
| P921 | main subject | songbirds | Q194240 |
| | genomics | Q222046 |
| P304 | page(s) | 3403 | |
| P577 | publication date | 2020-07-07 | |
| P1433 | published in | Nature Communications | Q573880 |
| P1476 | title | Discovery and population genomics of structural variation in a songbird genus | |
| P478 | volume | 11 | |