Modeling mammalian trunk development in a dish

scientific article published on 18 December 2020

Modeling mammalian trunk development in a dish is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.YDBIO.2020.12.015
P698PubMed publication ID33347872

P2093author name stringJesse V Veenvliet
Bernhard G Herrmann
P2860cites workCharacterization of cell fate probabilities in single-cell data with PalantirQ92539085
Engineering Stem Cell Self-organization to Build Better OrganoidsQ92585557
Understanding the Mechanobiology of Early Mammalian Development through Bioengineered ModelsQ92629037
The emergent landscape of the mouse gut endoderm at single-cell resolutionQ92932854
Patterning and mechanics of somite boundaries in zebrafish embryosQ95658799
Waiting on the Fringe: cell autonomy and signaling delays in segmentation clocksQ96155677
High-throughput automated organoid culture via stem-cell aggregation in microcavity arraysQ96230738
An in vitro model of early anteroposterior organization during human developmentQ96302955
Axis Specification in Zebrafish Is Robust to Cell Mixing and Reveals a Regulation of Pattern Formation by MorphogenesisQ96591164
Pluripotent stem cell models of early mammalian developmentQ97521737
Common principles of early mammalian embryo self-organisationQ97652606
Generalizing RNA velocity to transient cell states through dynamical modelingQ98196798
Phenotypic landscape of intestinal organoid regenerationQ100491071
Mouse embryonic stem cells self-organize into trunk-like structures with neural tube and somitesQ104281784
Eph signaling is required for segmentation and differentiation of the somitesQ24596675
Modeling mouse and human development using organoid culturesQ26782110
Neuromesodermal progenitors and the making of the spinal cordQ26795449
Cross-Scale Integrin Regulation Organizes ECM and Tissue Topology.Q27314679
α5β1 integrin-mediated adhesion to fibronectin is required for axis elongation and somitogenesis in miceQ27332406
A somitic compartment of tendon progenitorsQ28198180
Symmetry breaking, germ layer specification and axial organisation in aggregates of mouse embryonic stem cellsQ28250962
Organoids and the genetically encoded self-assembly of embryonic stem cellsQ28271001
Bone morphogenetic protein-4 is required for mesoderm formation and patterning in the mouseQ28296363
Cripto is required for correct orientation of the anterior–posterior axis in the mouse embryoQ28504851
Three neural tubes in mouse embryos with mutations in the T-box gene Tbx6Q28589973
Not just inductive: a crucial mechanical role for the endoderm during heart tube assemblyQ30512521
Somites without a clock.Q30576498
Self-organization of the human embryo in the absence of maternal tissues.Q30818621
High-throughput spatial mapping of single-cell RNA-seq data to tissue of originQ30930642
Spatial reconstruction of single-cell gene expression dataQ30930652
High-throughput in vivo vertebrate screeningQ33635305
Signaling gradients during paraxial mesoderm developmentQ33687019
Self-organizing properties of mouse pluripotent cells initiate morphogenesis upon implantationQ34404370
Structure and function of the notochord: an essential organ for chordate developmentQ34418493
Wnt/β-catenin and FGF signalling direct the specification and maintenance of a neuromesodermal axial progenitor in ensembles of mouse embryonic stem cellsQ34446332
Mouse gastrulation: the formation of a mammalian body planQ34452578
Generation of Aggregates of Mouse Embryonic Stem Cells that Show Symmetry Breaking, Polarization and Emergent Collective Behaviour In VitroQ34504594
Assembly of embryonic and extraembryonic stem cells to mimic embryogenesis in vitro.Q34552559
FGF4 and FGF8 comprise the wavefront activity that controls somitogenesis.Q34652756
Segmental patterning of the vertebrate embryonic axisQ34770048
Wnt signaling mediates self-organization and axis formation in embryoid bodiesQ34872357
Aggregated P19 mouse embryonal carcinoma cells as a simple in vitro model to study the molecular regulations of mesoderm formation and axial elongation morphogenesisQ34912334
Self-assembly of embryonic and two extra-embryonic stem cell types into gastrulating embryo-like structuresQ56967152
Multi-axial self-organization properties of mouse embryonic stem cells into gastruloidsQ57039988
Spatial Reconstruction of Single Enterocytes Uncovers Broad Zonation along the Intestinal Villus AxisQ57071733
RNA velocity of single cellsQ57173237
In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell LevelQ57477851
Nervous System Regionalization Entails Axial Allocation before Neural DifferentiationQ57815151
Geometrical confinement controls the asymmetric patterning of brachyury in cultures of pluripotent cellsQ58703198
Blastocyst-like structures generated solely from stem cellsQ59087648
Towards quantitative cell biologyQ60571747
Engineering Organoid VascularizationQ64074913
Current best practices in single-cell RNA-seq analysis: a tutorial.Q64974172
Self-organization of stem cells into embryos: A window on early mammalian developmentQ69497128
Basement Membrane Regulates Fibronectin Organization Using Sliding Focal Adhesions Driven by a Contractile WinchQ89467775
Integrin-Mediated Focal Anchorage Drives Epithelial Zippering during Mouse Neural Tube ClosureQ89673997
Single-cell and spatial transcriptomics reveal somitogenesis in gastruloidsQ89792286
CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexesQ89901100
Controlled modelling of human epiblast and amnion development using stem cellsQ90069565
Insights into mammalian morphogen dynamics from embryonic stem cell systemsQ90115534
Deconstructing and reconstructing the mouse and human early embryoQ90427612
Recapitulating the human segmentation clock with pluripotent stem cellsQ90836297
Tail Bud Progenitor Activity Relies on a Network Comprising Gdf11, Lin28, and Hox13 GenesQ91130148
Exposure-based assessment of chemical teratogenicity using morphogenetic aggregates of human embryonic stem cellsQ91231160
Gene expression cartographyQ91362841
Establishing neuronal diversity in the spinal cord: a time and a placeQ91450057
Zebrafish embryonic explants undergo genetically encoded self-assemblyQ91586986
Automated 3D light-sheet screening with high spatiotemporal resolution reveals mitotic phenotypesQ91969196
Dorsal-ventral patterned neural cyst from human pluripotent stem cells in a neurogenic nicheQ92028926
Self-Organization of Mouse Stem Cells into an Extended Potential BlastoidQ92044914
The endoderm: a divergent cell lineage with many commonalitiesQ92500902
Role of the extracellular matrix in morphogenesisQ35568918
Segmentation in vertebrates: clock and gradient finally joinedQ35876942
Matrigel: basement membrane matrix with biological activityQ36173565
Off limits--integrins holding boundaries in somitogenesisQ36222525
Cadherins in development: cell adhesion, sorting, and tissue morphogenesisQ36678732
Integrins in angiogenesis and lymphangiogenesisQ37170752
Neural tube morphogenesis in synthetic 3D microenvironmentsQ37398120
Stem cells, signals and vertebrate body axis extensionQ37460556
Quantitative approaches in developmental biology.Q37544246
Organoids: A historical perspective of thinking in three dimensionsQ37576625
Vertebrate segmentation: from cyclic gene networks to scoliosisQ37881028
Region-specific regulation of posterior axial elongation during vertebrate embryogenesis.Q38126445
Matrigel: from discovery and ECM mimicry to assays and models for cancer research.Q38226546
Control of extracellular matrix assembly along tissue boundaries via Integrin and Eph/Ephrin signalingQ38351884
The notochord: structure and functionsQ38400611
Self-Organization of Embryonic Genetic Oscillators into Spatiotemporal Wave PatternsQ38411138
PAPC couples the segmentation clock to somite morphogenesis by regulating N-cadherin-dependent adhesionQ38770518
Mechanical perspectives on the anterior-posterior axis polarization of mouse implanted embryosQ38815228
Organoids: Modeling Development and the Stem Cell Niche in a Dish.Q38965862
Position-dependent plasticity of distinct progenitor types in the primitive streakQ39188500
Making muscle: skeletal myogenesis in vivo and in vitro.Q39386999
The RGD motif in fibronectin is essential for development but dispensable for fibril assemblyQ39743726
Cell lineage of timed cohorts of Tbx6-expressing cells in wild-type and Tbx6 mutant embryosQ41336033
3D reconstitution of the patterned neural tube from embryonic stem cells.Q42082421
Single-cell spatial reconstruction reveals global division of labour in the mammalian liverQ42320342
Regulation of canonical Wnt signaling by Brachyury is essential for posterior mesoderm formationQ43228969
Scaling of embryonic patterning based on phase-gradient encodingQ44023372
Genome-wide RNA Tomography in the zebrafish embryoQ44623633
Pluripotent state transitions coordinate morphogenesis in mouse and human embryosQ46214573
Self-organization of the in vitro attached human embryoQ46553733
Integrinalpha5-dependent fibronectin accumulation for maintenance of somite boundaries in zebrafish embryos.Q47073725
Small molecule screen in embryonic zebrafish using modular variations to target segmentation.Q47097977
Anteroposterior polarity and elongation in the absence of extra-embryonic tissues and of spatially localised signalling in gastruloids: mammalian embryonic organoidsQ47142786
Antagonistic Activities of Sox2 and Brachyury Control the Fate Choice of Neuro-Mesodermal Progenitors.Q47301720
Excitable Dynamics and Yap-Dependent Mechanical Cues Drive the Segmentation ClockQ47639960
Micropattern differentiation of mouse pluripotent stem cells recapitulates embryo regionalized cell fate patterningQ48089925
The Drosophila embryo at single-cell transcriptome resolution.Q48144423
Human embryo research and the 14-day ruleQ48355551
Modulation of Phase Shift between Wnt and Notch Signaling Oscillations Controls Mesoderm Segmentation.Q50422140
Redefining the progression of lineage segregations during mammalian embryogenesis by clonal analysis.Q51926154
Overlapping and independent functions of fibronectin receptor integrins in early mesodermal developmentQ52536853
P577publication date2020-12-18
P1433published inDevelopmental BiologyQ3025402
P1476titleModeling mammalian trunk development in a dish

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