A comparison of approaches to accessing existing biological and chemical relational databases via SPARQL

scientific article published in 2023

A comparison of approaches to accessing existing biological and chemical relational databases via SPARQL is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1186/S13321-023-00729-5

P50authorJakub GalgonekQ43370892
Jiří VondrášekQ60961322
P2860cites workThe FAIR Guiding Principles for scientific data management and stewardshipQ27942822
A relational model of data for large shared data banksQ32061744
PubChem BioAssay: 2014 updateQ35033308
Rhea--a manually curated resource of biochemical reactionsQ35630899
BioCarian: search engine for exploratory searches in heterogeneous biological databasesQ41926215
Sachem: a chemical cartridge for high-performance substructure search.Q55016200
ChEMBL: towards direct deposition of bioassay dataQ58608307
GlycoStore: a database of retention properties for glycan analysisQ89088478
MolMeDB: Molecules on Membranes DatabaseQ93092450
UniProt: the universal protein knowledgebase in 2021Q102383737
IDSM ChemWebRDF: SPARQLing small-molecule datasetsQ106823303
The LOTUS initiative for open knowledge management in natural products researchQ112143478
Rhea, the reaction knowledgebase in 2022Q112679861
BETA: a comprehensive benchmark for computational drug–target predictionQ114093486
P433issue1
P921main subjectchemistryQ2329
SPARQLQ54871
databaseQ8513
biologyQ420
P577publication date2023-06-20
P1433published inJournal of CheminformaticsQ6294930
P1476titleA comparison of approaches to accessing existing biological and chemical relational databases via SPARQL
P478volume15

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Q123285784The SIB Swiss Institute of Bioinformatics Semantic Web of datacites workP2860

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