Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions

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Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PGEN.1003398
P932PMC publication ID3610820
P698PubMed publication ID23555304
P5875ResearchGate publication ID236106170

P50authorErich WankerQ1353445
Matthias FutschikQ37376165
Ravi Kiran Reddy KalathurQ55755978
Pablo Porras MillanQ57209160
P2093author name stringThomas Wallach
Achim Kramer
Bert Maier
Katja Schellenberg
P2860cites workDefining the transcriptome and proteome in three functionally different human cell linesQ34476804
The value of high quality protein-protein interaction networks for systems biologyQ34575835
UniHI: an entry gate to the human protein interactomeQ34589297
Post-translational modifications regulate the ticking of the circadian clock.Q34605395
Identification of SCF ubiquitin ligase substrates by global protein stability profilingQ34874145
Cell-autonomous circadian clock of hepatocytes drives rhythms in transcription and polyamine synthesisQ35546921
Building functional modules from molecular interactionsQ36557063
Roles of CLOCK phosphorylation in suppression of E-box-dependent transcriptionQ37233438
A protein interaction network links GIT1, an enhancer of huntingtin aggregation, to Huntington's diseaseQ24304932
A molecular mechanism for circadian clock negative feedbackQ24306693
Protein phosphatase 1 (PP1) is a post-translational regulator of the mammalian circadian clockQ24308677
Dec1 and Dec2 are regulators of the mammalian molecular clockQ24313082
SIRT1 regulates circadian clock gene expression through PER2 deacetylationQ24317933
A human protein-protein interaction network: a resource for annotating the proteomeQ24324450
Histone lysine demethylase JARID1a activates CLOCK-BMAL1 and influences the circadian clockQ24338936
The period of the circadian oscillator is primarily determined by the balance between casein kinase 1 and protein phosphatase 1Q24635366
A genome-wide RNAi screen for modifiers of the circadian clock in human cellsQ24655808
Coordination of circadian timing in mammalsQ27860673
Network biology: understanding the cell's functional organizationQ27861027
Posttranslational Mechanisms Regulate the Mammalian Circadian ClockQ27863710
Role of the CLOCK protein in the mammalian circadian mechanismQ27867710
Exploring complex networksQ28205472
Coordinated transcription of key pathways in the mouse by the circadian clockQ28217978
Global quantification of mammalian gene expression controlQ28238103
PERIOD1-associated proteins modulate the negative limb of the mammalian circadian oscillatorQ28510386
BMAL1-dependent circadian oscillation of nuclear CLOCK: posttranslational events induced by dimerization of transcriptional activators of the mammalian clock systemQ28584828
CIPC is a mammalian circadian clock protein without invertebrate homologuesQ28591316
The histone methyltransferase MLL1 permits the oscillation of circadian gene expressionQ28594155
Evidence for dynamically organized modularity in the yeast protein-protein interaction networkQ29614449
Extensive and divergent circadian gene expression in liver and heartQ29615206
Dynamic Complex Formation During the Yeast Cell CycleQ30002325
Circadian orchestration of the hepatic proteomeQ33245770
Harmonics of circadian gene transcription in mammalsQ33426339
Regulation of BMAL1 protein stability and circadian function by GSK3beta-mediated phosphorylation.Q33521907
Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liverQ33834076
Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell lineQ34133238
An experimentally derived confidence score for binary protein-protein interactionsQ34292333
Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networksQ81191524
Clocks not winding down: unravelling circadian networksQ37802192
Kinases and phosphatases in the mammalian circadian clockQ37849981
A large-scale functional RNAi screen reveals a role for CK2 in the mammalian circadian clock.Q39870718
Global protein stability profiling in mammalian cellsQ39920489
UniHI 4: new tools for query, analysis and visualization of the human protein-protein interactomeQ43122469
Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysisQ48357093
Identification of RACK1 and protein kinase Calpha as integral components of the mammalian circadian clock.Q54697147
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesCytoscapeQ3699942
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectprotein-protein interactionQ896177
protein function predictionQ7251473
identical protein bindingQ14762994
Cryptochrome 1 (photolyase-like)Q14866013
Circadian locomotor output cycles kaputQ14908776
Period circadian clock 2Q15323263
Casein kinase 1, epsilonQ15326636
Period circadian clock 1Q15326775
Casein kinase 2 betaQ21102142
circadian rhythmQ208353
Non-POU domain containing octamer bindingQ21110618
Cryptochrome 2 (photolyase-like)Q21499186
Aryl hydrocarbon receptor nuclear translocator-likeQ21499187
Protein phosphatase 1 catalytic subunit alphaQ21981223
P304page(s)e1003398
P577publication date2013-03-28
P1433published inPLOS GeneticsQ1893441
P1476titleDynamic circadian protein-protein interaction networks predict temporal organization of cellular functions
P478volume9

Reverse relations

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