Shotgun identification of protein modifications from protein complexes and lens tissue

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Shotgun identification of protein modifications from protein complexes and lens tissue is …
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scholarly articleQ13442814

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P819ADS bibcode2002PNAS...99.7900M
P356DOI10.1073/PNAS.122231399
P8608Fatcat IDrelease_n5hxa3spwrhzxa32n6nedzz3ri
P3181OpenCitations bibliographic resource ID2744981
P932PMC publication ID122992
P698PubMed publication ID12060738
P5875ResearchGate publication ID11313129

P50authorAnita SarafQ28358046
Michael P. WashburnQ41118885
Kathleen L. GouldQ59158946
Michael J MacCossQ87441179
P2093author name stringJohn R Yates
Avery Weiss
Dirk Wolters
John I Clark
Joseph J Tasto
Judy M Clark
Rovshan Sadygov
W Hayes McDonald
P2860cites workAcetylation of histones and transcription-related factorsQ24548503
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Large-scale analysis of the yeast proteome by multidimensional protein identification technologyQ28131778
The major in vivo modifications of the human water-insoluble lens crystallins are disulfide bonds, deamidation, methionine oxidation and backbone cleavageQ28142819
Quantitative analysis of complex protein mixtures using isotope-coded affinity tagsQ28145324
Identification by electrospray ionization mass spectrometry of the sites of tyrosine phosphorylation induced in activated Jurkat T cells on the protein tyrosine kinase ZAP-70Q28241001
Post-translational modifications of water-soluble human lens crystallins from young adultsQ28252928
Regulation of Cdc2 activity by phosphorylation at T14/Y15Q28268362
Identification of phosphorylation sites of human 85-kDa cytosolic phospholipase A2 expressed in insect cells and present in human monocytesQ28279400
In vivo carbamylation and acetylation of water-soluble human lens alphaB-crystallin lysine 92Q28365658
Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptorQ29614530
Acetylation: a regulatory modification to rival phosphorylation?Q29614886
DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomicsQ29615322
Direct analysis of protein complexes using mass spectrometryQ29617450
Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein databaseQ30014825
Strategy for qualitative and quantitative analysis in proteomics based on signature peptides.Q30656294
Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteomeQ30660384
Peptide sequence motif analysis of tandem MS data with the SALSA algorithmQ30670479
A multidimensional electrospray MS-based approach to phosphopeptide mappingQ32057815
Histone acetylation and the control of the cell cycleQ33877689
State of the arg: protein methylation at arginine comes of age.Q34084396
Mechanisms of photochemically produced turbidity in lens protein solutionsQ34289430
Structure and modifications of the junior chaperone alpha-crystallin. From lens transparency to molecular pathologyQ34323303
Differential phosphorylation of alpha-A crystallin in human lens of different age.Q34392724
ATP-enhanced molecular chaperone functions of the small heat shock protein human alphaB crystallinQ35782226
Identification of the posttranslational modifications of bovine lens αB‐crystallins by mass spectrometryQ36277606
Identification of tryptophan oxidation products in bovine alpha-crystallinQ36280700
Tandem mass spectrometry reveals that three photosystem II proteins of spinach chloroplasts contain N-acetyl-O-phosphothreonine at their NH2 termini.Q36432653
Identification of the in vivo truncation sites at the C-terminal region of alpha-A crystallin from aged bovine and human lensQ36787220
cAMP-dependent phosphorylation of bovine lens alpha-crystallinQ37540868
AlphaB-crystallin selectively targets intermediate filament proteins during thermal stressQ38326485
The ubiquitin-dependent proteolytic pathway: specificity of recognition of the proteolytic substratesQ38329934
Post-translational modification of proteins.Q40821257
A systematic approach to the analysis of protein phosphorylationQ43563012
Vectors and gene targeting modules for tandem affinity purification in Schizosaccharomyces pombeQ43592539
Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analysesQ43637768
Size of human lens beta-crystallin aggregates are distinguished by N-terminal truncation of betaB1.Q47310266
Identification of the major components of the high molecular weight crystallins from old human lensesQ47374973
Automated identification of amino acid sequence variations in proteins by HPLC/microspray tandem mass spectrometryQ47594237
Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level.Q53856036
Definition and comparison of the phosphorylation sites of the A and B chains of bovine alpha-crystallinQ68288101
The phosphorylation sites of the B2 chain of bovine alpha-crystallinQ69014503
Some aspects of the phosphorylation of alpha-crystallin AQ69640127
The effects of near-UV radiation on human lens beta-crystallins: protein structural changes and the production of O2- and H2O2Q69685166
Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databasesQ71208651
Micro-identification of amino-terminal acetylamino acids in proteinsQ71454622
Simultaneous racemization and isomerization at specific aspartic acid residues in alpha B-crystallin from the aged human lensQ72326916
ATP and the core "alpha-Crystallin" domain of the small heat-shock protein alphaB-crystallinQ73066693
An atypical form of alphaB-crystallin is present in high concentration in some human cataractous lenses. Identification and characterization of aberrant N- and C-terminal processingQ73133800
Modifications of the water-insoluble human lens alpha-crystallinsQ73151150
Cleavage of amino acid residue(s) from the N-terminal region of alpha A- and alpha B-crystallins in human crystalline lens during agingQ73155056
Post-translational modification of alphaB-crystallin of normal human lensQ73519808
Identification of hydrogen peroxide oxidation sites of alpha A- and alpha B-crystallinsQ73587353
Influence of protein-glutathione mixed disulfide on the chaperone-like function of alpha-crystallinQ73853941
Deamidation and disulfide bonding in human lens gamma-crystallinsQ77431446
P433issue12
P407language of work or nameEnglishQ1860
P921main subjectShotgun proteomicsQ7502514
P304page(s)7900-5
P577publication date2002-06-11
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleShotgun identification of protein modifications from protein complexes and lens tissue
P478volume99

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