| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Wolf-Dietrich Hardt | Q58331725 |
| Harald Brüssow | Q76490066 | ||
| Carlos Canchaya | Q42409126 | ||
| P2860 | cites work | Virioplankton: Viruses in Aquatic Ecosystems | Q22061799 |
| Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak | Q22065263 | ||
| Genome sequence of Yersinia pestis KIM | Q22065462 | ||
| Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution | Q22065771 | ||
| The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129 | Q22065991 | ||
| Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae | Q22066228 | ||
| Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence | Q22066234 | ||
| Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks | Q22066331 | ||
| Complete genome sequence of an M1 strain of Streptococcus pyogenes | Q22066334 | ||
| Selfish operons: horizontal transfer may drive the evolution of gene clusters | Q24533213 | ||
| The Phage Proteomic Tree: a genome-based taxonomy for phage | Q24539335 | ||
| Genomic analysis of uncultured marine viral communities | Q24540367 | ||
| Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa. | Q24542428 | ||
| Type III protein secretion systems in bacterial pathogens of animals and plants | Q24548602 | ||
| The pleiotropic two-component regulatory system PhoP-PhoQ | Q24548929 | ||
| Phage conversion of exfoliative toxin A production in Staphylococcus aureus | Q42638961 | ||
| Phage conversion of Panton-Valentine leukocidin in Staphylococcus aureus: molecular analysis of a PVL-converting phage, phiSLT. | Q42650562 | ||
| Nucleotide sequence of coliphage HK620 and the evolution of lambdoid phages | Q42657586 | ||
| Comparative genomics reveals close genetic relationships between phages from dairy bacteria and pathogenic Streptococci: evolutionary implications for prophage-host interactions | Q42661459 | ||
| Complete nucleotide sequence and molecular characterization of the temperate staphylococcal bacteriophage phiPVL carrying Panton-Valentine leukocidin genes | Q42680997 | ||
| Functional and genetic analysis of regulatory regions of coliphage H-19B: location of shiga-like toxin and lysis genes suggest a role for phage functions in toxin release. | Q42681747 | ||
| Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae | Q43352607 | ||
| A theory of modular evolution for bacteriophages | Q43948704 | ||
| Mutation in the structural gene for diphtheria toxin carried by temperate phage . | Q43953223 | ||
| Molecular genetics of SaPI1--a mobile pathogenicity island in Staphylococcus aureus | Q44096017 | ||
| λ Lysogens of E. coli reproduce more rapidly than non-lysogens | Q44145962 | ||
| Characterization of a novel Vibrio pathogenicity island (VPI-2) encoding neuraminidase (nanH) among toxigenic Vibrio cholerae isolates | Q44213600 | ||
| Transcription analysis of Streptococcus thermophilus phages in the lysogenic state | Q44214880 | ||
| Curing and induction of the Fels 1 and Fels 2 prophages in the Ames mutagen tester strains of Salmonella typhimurium | Q45155714 | ||
| Paleontology. Digging up fresh clues about the origin of mammals. | Q45966425 | ||
| PepA, a secreted protein of Pseudomonas aeruginosa, is necessary for cytotoxicity and virulence | Q46092317 | ||
| Transgenic mice expressing the diphtheria toxin receptor are sensitive to the toxin | Q47613022 | ||
| Bacteriophage and the Toxigenicity of Clostridium botulinum Type C | Q47757750 | ||
| Variable assortment of prophages provides a transferable repertoire of pathogenic determinants in Salmonella | Q47803423 | ||
| Inducible prophages contribute to Salmonella virulence in mice | Q47945889 | ||
| The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus | Q48027686 | ||
| SopE, a secreted protein of Salmonella dublin, is translocated into the target eukaryotic cell via a sip-dependent mechanism and promotes bacterial entry | Q48059335 | ||
| The Salmonella typhimurium invasion genes invF and invG encode homologues of the AraC and PulD family of proteins | Q48080387 | ||
| Promoter analysis of the staphylococcal enterotoxin A gene. | Q48085653 | ||
| Cloning, sequencing and distribution of the Salmonella typhimurium LT2 sialidase gene, nanH, provides evidence for interspecies gene transfer | Q48178366 | ||
| Transfer of the Salmonella type III effector sopE between unrelated phage families. | Q48344273 | ||
| Prophage, phiPV83-pro, carrying panton-valentine leukocidin genes, on the Staphylococcus aureus P83 chromosome: comparative analysis of the genome structures of phiPV83-pro, phiPVL, phi11, and other phages. | Q48379657 | ||
| Prevalence and polymorphism of genes encoding translocated effector proteins among clinical isolates of Salmonella enterica. | Q48379907 | ||
| Phage mediated horizontal transfer of the sopE1 gene increases enteropathogenicity of Salmonella enterica serotype Typhimurium for calves. | Q50106235 | ||
| DNA repair: how Ku makes ends meet. | Q34446464 | ||
| Further characterization of the PhoP regulon: identification of new PhoP-activated virulence loci | Q34545309 | ||
| Use of phoA gene fusions to identify a pilus colonization factor coordinately regulated with cholera toxin | Q34618561 | ||
| Nucleotide sequence of the Shiga-like toxin genes of Escherichia coli | Q34633814 | ||
| Genome-wide protective response used by group A Streptococcus to evade destruction by human polymorphonuclear leukocytes | Q34762884 | ||
| Bacteriophages: evolution of the majority | Q34776752 | ||
| ToxR regulon of Vibrio cholerae and its expression in vibrios shed by cholera patients. | Q34808623 | ||
| Group A Streptococcus gene expression in humans and cynomolgus macaques with acute pharyngitis | Q34854824 | ||
| Prophage induction and expression of prophage-encoded virulence factors in group A Streptococcus serotype M3 strain MGAS315. | Q34943643 | ||
| The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence | Q34990709 | ||
| Common themes among bacteriophage-encoded virulence factors and diversity among the bacteriophages involved | Q34990712 | ||
| Examination of diverse toxin-coregulated pilus-positive Vibrio cholerae strains fails to demonstrate evidence for Vibrio pathogenicity island phage. | Q35011631 | ||
| Marine phage genomics | Q35019459 | ||
| Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications | Q35021298 | ||
| The various and varying roles of specific chaperones in type III secretion systems. | Q35077170 | ||
| Genome analysis of a novel Shiga toxin 1 (Stx1)-converting phage which is closely related to Stx2-converting phages but not to other Stx1-converting phages. | Q35098340 | ||
| Cloning and complete nucleotide sequence of the gene for the main component of hemagglutinin produced by Clostridium botulinum type C. | Q35105408 | ||
| A Salmonella enterica serovar typhimurium translocated leucine-rich repeat effector protein inhibits NF-kappa B-dependent gene expression. | Q35106240 | ||
| Role of nonhost environments in the lifestyles of Salmonella and Escherichia coli | Q35154863 | ||
| Integration and distribution of Lactobacillus johnsonii prophages | Q35161953 | ||
| A conserved amino acid sequence directing intracellular type III secretion by Salmonella typhimurium | Q35162771 | ||
| Prophages and bacterial genomics: what have we learned so far? | Q35187156 | ||
| Clostridium botulinum toxins: a general review of involvement in disease, structure, mode of action and preparation for clinical use | Q35225713 | ||
| Chromosomal insertion sites for phages and plasmids | Q35536155 | ||
| Role of the Salmonella pathogenicity island 1 effector proteins SipA, SopB, SopE, and SopE2 in Salmonella enterica subspecies 1 serovar Typhimurium colitis in streptomycin-pretreated mice | Q35549925 | ||
| Cloning and characterization of the region III flagellar operons of the four Shigella subgroups: genetic defects that cause loss of flagella of Shigella boydii and Shigella sonnei | Q35626219 | ||
| The SopEPhi phage integrates into the ssrA gene of Salmonella enterica serovar Typhimurium A36 and is closely related to the Fels-2 prophage | Q35663112 | ||
| Transfer of neurotoxigenicity from Clostridium butyricum to a nontoxigenic Clostridium botulinum type E-like strain. | Q35684182 | ||
| The impact of prophages on bacterial chromosomes | Q35822027 | ||
| A substrate of the centisome 63 type III protein secretion system of Salmonella typhimurium is encoded by a cryptic bacteriophage. | Q35928813 | ||
| Generalized transduction in Streptomyces coelicolor | Q35939811 | ||
| "Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli | Q36013594 | ||
| Comparative analysis of C3 and botulinal neurotoxin genes and their environment in Clostridium botulinum types C and D. | Q36123834 | ||
| InvB is required for type III-dependent secretion of SopA in Salmonella enterica serovar Typhimurium | Q36234110 | ||
| Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18 | Q24554266 | ||
| The risk of the hemolytic-uremic syndrome after antibiotic treatment of Escherichia coli O157:H7 infections | Q24623245 | ||
| Studies on the virulence of bacteriophage-infected strains of Corynebacterium diphtheriae | Q24630695 | ||
| Isolation of an organism resembling Clostridium barati which produces type F botulinal toxin from an infant with botulism | Q24643384 | ||
| Prevalence and some properties of verotoxin (Shiga-like toxin)-producing Escherichia coli in seven different species of healthy domestic animals | Q24655713 | ||
| Host-induced epidemic spread of the cholera bacterium | Q24657125 | ||
| Prophage genomics | Q24673108 | ||
| Three-dimensional secretion signals in chaperone-effector complexes of bacterial pathogens | Q27639078 | ||
| The complete genome sequence of Escherichia coli K-12 | Q27860542 | ||
| Filamentous phages linked to virulence of Vibrio cholerae | Q28180172 | ||
| Commensal host-bacterial relationships in the gut | Q28188763 | ||
| Origins of highly mosaic mycobacteriophage genomes | Q28198119 | ||
| Genome and virulence determinants of high virulence community-acquired MRSA | Q28202214 | ||
| Whole genome sequencing of meticillin-resistant Staphylococcus aureus | Q28202807 | ||
| Persisting bacteriophage infections, lysogeny, and phage conversions | Q28237949 | ||
| Identification of a DNA nonhomologous end-joining complex in bacteria | Q28486519 | ||
| Characterization of the diphtheria tox transcript in Corynebacterium diphtheriae and Escherichia coli | Q28776831 | ||
| Amelioration of bacterial genomes: rates of change and exchange | Q29618260 | ||
| Cytolethal distending toxin gene cluster in enterohemorrhagic Escherichia coli O157:H- and O157:H7: characterization and evolutionary considerations | Q30936118 | ||
| Invasive M1T1 group A Streptococcus undergoes a phase-shift in vivo to prevent proteolytic degradation of multiple virulence factors by SpeB. | Q31030256 | ||
| A fluoroquinolone induces a novel mitogen-encoding bacteriophage in Streptococcus canis | Q31142982 | ||
| Use of in vivo-induced antigen technology (IVIAT) to identify genes uniquely expressed during human infection with Vibrio cholerae | Q31147722 | ||
| Identification of PhoP-PhoQ activated genes within a duplicated region of the Salmonella typhimurium chromosome. | Q32036245 | ||
| S. typhimurium encodes an activator of Rho GTPases that induces membrane ruffling and nuclear responses in host cells. | Q32060838 | ||
| Metagenomic analyses of an uncultured viral community from human feces | Q33193633 | ||
| Comparison of Shiga toxin production by hemolytic-uremic syndrome-associated and bovine-associated Shiga toxin-producing Escherichia coli isolates. | Q33346383 | ||
| Clinical, microbial, and biochemical aspects of the exfoliative toxins causing staphylococcal scalded-skin syndrome. | Q33588900 | ||
| Two different types of ADP-ribosyltransferase C3 from Clostridium botulinum type D lysogenized organisms | Q33617544 | ||
| Molecular genetics of bacteriophage P22 | Q33622562 | ||
| New knowledge on pathogenesis of bacterial enteric infections as applied to vaccine development | Q33628356 | ||
| Type III secretion machines: bacterial devices for protein delivery into host cells | Q33639326 | ||
| Periplasmic superoxide dismutase protects Salmonella from products of phagocyte NADPH-oxidase and nitric oxide synthase. | Q33740986 | ||
| Complex function for SicA, a Salmonella enterica serovar typhimurium type III secretion-associated chaperone | Q33789355 | ||
| InvB is a type III secretion chaperone specific for SspA. | Q33792217 | ||
| Selection for in vivo regulators of bacterial virulence | Q36241165 | ||
| Iron regulation of Shiga-like toxin expression in Escherichia coli is mediated by the fur locus | Q36269210 | ||
| Multilocus analysis of extracellular putative virulence proteins made by group A Streptococcus: population genetics, human serologic response, and gene transcription | Q36315066 | ||
| Bacteriophage ST64B, a Genetic Mosaic of Genes from Diverse Sources Isolated fromSalmonella entericaSerovar Typhimurium DT 64 | Q36370585 | ||
| Prophage Contribution to Bacterial Population Dynamics | Q36370937 | ||
| Virulent Salmonella typhimurium has two periplasmic Cu, Zn-superoxide dismutases | Q36398159 | ||
| Isolation of a temperate bacteriophage encoding the type III effector protein SopE from an epidemic Salmonella typhimurium strain | Q36437267 | ||
| Increased reproductive fitness of Escherichia coli lambda lysogens | Q36513312 | ||
| Reproductive fitness of P1, P2, and Mu lysogens of Escherichia coli | Q36513355 | ||
| Restriction endonuclease map of corynebacteriophage omega ctox+ isolated from the Park-Williams no. 8 strain of Corynebacterium diphtheriae | Q36929906 | ||
| Frequency of the erythrogenic toxin B and C genes (speB and speC) among clinical isolates of group A streptococci | Q36959424 | ||
| Characterization of the C3 gene of Clostridium botulinum types C and D and its expression in Escherichia coli | Q36988160 | ||
| Molecular epidemiologic analysis of the type A streptococcal exotoxin (erythrogenic toxin) gene (speA) in clinical Streptococcus pyogenes strains | Q37006845 | ||
| DNA relationships among some tox-bearing corynebacteriophages | Q37033450 | ||
| Transcription of the Toxin Genes Present within the Staphylococcal Phage φSa3ms Is Intimately Linked with the Phage's Life Cycle | Q37062747 | ||
| Evolutionary genomics of Staphylococcus aureus: insights into the origin of methicillin-resistant strains and the toxic shock syndrome epidemic | Q37116927 | ||
| Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage | Q37176080 | ||
| Characterization of an organism that produces type E botulinal toxin but which resembles Clostridium butyricum from the feces of an infant with type E botulism | Q37201618 | ||
| Lysogeny in staphylococci | Q37473723 | ||
| Transcription of the Shiga-like toxin type II and Shiga-like toxin type II variant operons of Escherichia coli | Q37608531 | ||
| Site-specific recombination links the evolution of P2-like coliphages and pathogenic enterobacteria | Q38553480 | ||
| Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product | Q39494660 | ||
| Role for a phage promoter in Shiga toxin 2 expression from a pathogenic Escherichia coli strain. | Q39503050 | ||
| Salmonella host cell invasion emerged by acquisition of a mosaic of separate genetic elements, including Salmonella pathogenicity island 1 (SPI1), SPI5, and sopE2. | Q39503254 | ||
| Lysogenic conversion of environmental Vibrio mimicus strains by CTXPhi | Q39512612 | ||
| Induction of lysogenic bacteriophage and phage-associated toxin from group a streptococci during coculture with human pharyngeal cells | Q39518685 | ||
| Human neutrophils and their products induce Shiga toxin production by enterohemorrhagic Escherichia coli | Q39519054 | ||
| Molecular evolution of a pathogenicity island from enterohemorrhagic Escherichia coli O157:H7. | Q39572360 | ||
| In vivo transduction with shiga toxin 1-encoding phage. | Q39572968 | ||
| Molecular analyses of a putative CTXphi precursor and evidence for independent acquisition of distinct CTX(phi)s by toxigenic Vibrio cholerae | Q39585819 | ||
| Identification of SopE2, a Salmonella secreted protein which is highly homologous to SopE and involved in bacterial invasion of epithelial cells | Q39587251 | ||
| Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in Salmonella typhimurium. | Q39645093 | ||
| A satellite phage-encoded antirepressor induces repressor aggregation and cholera toxin gene transfer | Q39647882 | ||
| icmT is essential for pore formation-mediated egress of Legionella pneumophila from mammalian and protozoan cells. | Q39653596 | ||
| Biology and molecular epidemiology of diphtheria toxin and the tox gene | Q33829020 | ||
| Quinolone antibiotics induce Shiga toxin-encoding bacteriophages, toxin production, and death in mice. | Q33889513 | ||
| The R-type pyocin of Pseudomonas aeruginosa is related to P2 phage, and the F-type is related to lambda phage | Q33924579 | ||
| Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages | Q33929777 | ||
| Molecular basis of Salmonella-induced enteritis | Q33938202 | ||
| Global differential gene expression in response to growth temperature alteration in group A Streptococcus | Q33943256 | ||
| Epitope tagging of chromosomal genes in Salmonella | Q33953109 | ||
| In vivo lysogenic conversion of Tox(-) Streptococcus pyogenes to Tox(+) with Lysogenic Streptococci or free phage | Q33966693 | ||
| Prevalence and characteristics of shiga toxin-producing Escherichia coli from healthy cattle in Japan | Q33988749 | ||
| A high incidence of prophage carriage among natural isolates of Streptococcus pneumoniae. | Q33992264 | ||
| InvF is required for expression of genes encoding proteins secreted by the SPI1 type III secretion apparatus in Salmonella typhimurium | Q33992712 | ||
| Tissue-specific gene expression identifies a gene in the lysogenic phage Gifsy-1 that affects Salmonella enterica serovar typhimurium survival in Peyer's patches. | Q33994441 | ||
| Acquisition of the rfb-gnd cluster in evolution of Escherichia coli O55 and O157. | Q33994832 | ||
| Sequence of the genome of Salmonella bacteriophage P22 | Q33994952 | ||
| Characterization of grvA, an antivirulence gene on the gifsy-2 phage in Salmonella enterica serovar typhimurium | Q33995341 | ||
| Ancestral divergence, genome diversification, and phylogeographic variation in subpopulations of sorbitol-negative, beta-glucuronidase-negative enterohemorrhagic Escherichia coli O157. | Q33997128 | ||
| Differential regulation of Salmonella typhimurium type III secreted proteins by pathogenicity island 1 (SPI-1)-encoded transcriptional activators InvF and hilA. | Q34001486 | ||
| Genetic relatedness and superantigen expression in group A streptococcus serotype M1 isolates from patients with severe and nonsevere invasive diseases | Q34004799 | ||
| Inverse relation between disease severity and expression of the streptococcal cysteine protease, SpeB, among clonal M1T1 isolates recovered from invasive group A streptococcal infection cases | Q34005015 | ||
| Reciprocal, temporal expression of SpeA and SpeB by invasive M1T1 group a streptococcal isolates in vivo | Q34008621 | ||
| The human pathogen Pseudomonas aeruginosa utilizes conserved virulence pathways to infect the social amoeba Dictyostelium discoideum | Q34016834 | ||
| Assembly and function of type III secretory systems | Q34052773 | ||
| Seasonal variation in lysogeny as depicted by prophage induction in Tampa Bay, Florida | Q34058774 | ||
| Lysogenic conversion by a filamentous phage encoding cholera toxin | Q34062735 | ||
| Evolutionary genomics of Salmonella: gene acquisitions revealed by microarray analysis | Q34066388 | ||
| The origins and ongoing evolution of viruses | Q34106581 | ||
| Phage genomics: small is beautiful | Q34109429 | ||
| Intimin, tir, and shiga toxin 1 do not influence enteropathogenic responses to shiga toxin-producing Escherichia coli in bovine ligated intestinal loops | Q34117980 | ||
| Rgg influences the expression of multiple regulatory loci to coregulate virulence factor expression in Streptococcus pyogenes | Q34118071 | ||
| Dissemination of the phage-associated novel superantigen gene speL in recent invasive and noninvasive Streptococcus pyogenes M3/T3 isolates in Japan | Q34124288 | ||
| Evolutionary and functional analyses of variants of the toxin-coregulated pilus protein TcpA from toxigenic Vibrio cholerae non-O1/non-O139 serogroup isolates | Q34132602 | ||
| Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae. | Q34144361 | ||
| The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria | Q34154001 | ||
| Identification of SopE2 from Salmonella typhimurium, a conserved guanine nucleotide exchange factor for Cdc42 of the host cell. | Q50119973 | ||
| Salmonella SsrB activates a global regulon of horizontally acquired genes. | Q50120790 | ||
| The putative invasion protein chaperone SicA acts together with InvF to activate the expression of Salmonella typhimurium virulence genes. | Q50122261 | ||
| Unsuspected prophage-like elements in Salmonella typhimurium. | Q50133709 | ||
| Molecular analysis of the role of streptococcal pyrogenic Exotoxin A (SPEA) in invasive soft-tissue infection resulting from Streptococcus pyogenes. | Q52536043 | ||
| Bacteriophage control of Shiga toxin 1 production and release by Escherichia coli. | Q54545661 | ||
| Escherichia coli O157:H7 | Q56336651 | ||
| The prophage sequences of Lactobacillus plantarum strain WCFS1 | Q57245691 | ||
| Filamentous phage integration requires the host recombinases XerC and XerD | Q59060436 | ||
| Insertional inactivation of the Staphylococcus aureus β-toxin by bacteriophage φ13 occurs by site-and orientation-specific integration of the φ 13 genome | Q61739934 | ||
| Regulation and temporal expression patterns of Vibrio cholerae virulence genes during infection | Q64449734 | ||
| Staphylococcal enterotoxin A is encoded by phage | Q67296711 | ||
| Bacteriophage and the Toxigenicity of Clostridium botulinum Type D | Q69169562 | ||
| Pore formation by a two-component leukocidin from Staphylococcus aureus within the membrane of human polymorphonuclear leukocytes | Q70480981 | ||
| Mapping of Deletions and Substitutions in Heteroduplex DNA Molecules of Bacteriophage Lambda by Electron Microscopy | Q72338889 | ||
| Specificity of the protein secretory apparatus: secretion of the heat-labile enterotoxin B subunit pentamers by different species of gram- bacteria | Q72427240 | ||
| Generalized transduction of serotype 1/2 and serotype 4b strains of Listeria monocytogenes | Q73396047 | ||
| Quantitative and qualitative comparison of virulence traits, including murine lethality, among different M types of group A streptococci | Q73492968 | ||
| Bacteriophages with tails: chasing their origins and evolution | Q73506364 | ||
| Convergence of the secretory pathways for cholera toxin and the filamentous phage, CTXphi | Q73675603 | ||
| Identification of the minimum segment in which the threonine246 residue is a potential phosphorylated site by protein kinase A for the LukS-specific function of staphylococcal leukocidin | Q73775287 | ||
| Repression of virulence genes by phosphorylation-dependent oligomerization of CsrR at target promoters in S. pyogenes | Q74008692 | ||
| A family of DNA repair ligases in bacteria? | Q74535996 | ||
| Diversification of Escherichia coli genomes: are bacteriophages the major contributors? | Q74613244 | ||
| Chromosomal constraints in Gram-positive bacteria revealed by artificial inversions | Q75388773 | ||
| Where are the pseudogenes in bacterial genomes? | Q77589962 | ||
| Integration and excision of the Mycobacterium tuberculosis prophage-like element, phiRv1 | Q78297706 | ||
| Priming virulence factors for delivery into the host | Q79079078 | ||
| Biology of the temperate Streptococcus thermophilus bacteriophage TP-J34 and physical characterization of the phage genome | Q79236833 | ||
| Conversion of Bacillius subtilis DNA to phage DNA following mitomycin C induction | Q93832708 | ||
| Genome analysis of an inducible prophage and prophage remnants integrated in the Streptococcus pyogenes strain SF370. | Q34159879 | ||
| Virulence control in group A Streptococcus by a two-component gene regulatory system: global expression profiling and in vivo infection modeling | Q34161889 | ||
| Global phage diversity | Q34191803 | ||
| Phylogenetics and the cohesion of bacterial genomes | Q34220940 | ||
| Biology of type II secretion | Q34222725 | ||
| InvB is a type III secretion-associated chaperone for the Salmonella enterica effector protein SopE. | Q34232626 | ||
| Characterization of two novel pyrogenic toxin superantigens made by an acute rheumatic fever clone of Streptococcus pyogenes associated with multiple disease outbreaks | Q34261899 | ||
| Salmonella pathogenicity islands encoding type III secretion systems | Q34288964 | ||
| Genome organization of the anaerobic pathogen Clostridium perfringens | Q34301332 | ||
| Complete genomic sequence of SfV, a serotype-converting temperate bacteriophage of Shigella flexneri | Q34307648 | ||
| Identification of GtgE, a novel virulence factor encoded on the Gifsy-2 bacteriophage of Salmonella enterica serovar Typhimurium | Q34319368 | ||
| Emergence and evolution of Vibrio cholerae O139 | Q34330527 | ||
| Salmonella interactions with host cells: type III secretion at work | Q34425135 | ||
| Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning | Q34430712 | ||
| Selfish operons and speciation by gene transfer | Q34438888 | ||
| The nucleotide sequence of Shiga toxin (Stx) 2e-encoding phage phiP27 is not related to other Stx phage genomes, but the modular genetic structure is conserved. | Q39654565 | ||
| The in vitro interaction of Streptococcus pyogenes with human pharyngeal cells induces a phage-encoded extracellular DNase | Q39655179 | ||
| The Salmonella enterica serotype typhimurium effector proteins SipA, SopA, SopB, SopD, and SopE2 act in concert to induce diarrhea in calves. | Q39655497 | ||
| Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches | Q39680086 | ||
| Genomic Structure of the Salmonella enterica Serovar Typhimurium DT 64 Bacteriophage ST64T: Evidence for Modular Genetic Architecture | Q39753897 | ||
| Nonpathogenic Escherichia coli can contribute to the production of Shiga toxin | Q39755249 | ||
| Shiga toxin 2-converting bacteriophages associated with clonal variability in Escherichia coli O157:H7 strains of human origin isolated from a single outbreak | Q39792402 | ||
| Frequency of generalized transducing phages in natural isolates of the Salmonella typhimurium complex | Q39797484 | ||
| Identification of prophage genes expressed in lysogens of the Lactococcus lactis bacteriophage BK5-T. | Q39798800 | ||
| The genes for the Clostridium botulinum type G toxin complex are on a plasmid. | Q39822130 | ||
| Characterization of the neurotoxin isolated from a Clostridium baratii strain implicated in infant botulism | Q40149251 | ||
| Role of the Salmonella pathogenicity island 1 (SPI-1) protein InvB in type III secretion of SopE and SopE2, two Salmonella effector proteins encoded outside of SPI-1. | Q40173901 | ||
| Type F botulism due to neurotoxigenic Clostridium baratii from an unknown source in an adult | Q40214264 | ||
| DNA sequence of exoenzyme C3, an ADP-ribosyltransferase encoded by Clostridium botulinum C and D phages | Q40514807 | ||
| The sialidase superfamily and its spread by horizontal gene transfer | Q40637087 | ||
| The Gam protein of bacteriophage Mu is an orthologue of eukaryotic Ku. | Q40663299 | ||
| Differential accumulation of Salmonella[Cu, Zn] superoxide dismutases SodCI and SodCII in intracellular bacteria: correlation with their relative contribution to pathogenicity | Q40699610 | ||
| Icm/dot-dependent upregulation of phagocytosis by Legionella pneumophila. | Q40766603 | ||
| Transcription antitermination: the lambda paradigm updated | Q41034487 | ||
| ExoU expression by Pseudomonas aeruginosa correlates with acute cytotoxicity and epithelial injury | Q41095866 | ||
| Antibody response to bacteriophage hyaluronidase in acute glomerulonephritis after group A streptococcal infection | Q41452716 | ||
| Salmonella typhimurium leucine-rich repeat proteins are targeted to the SPI1 and SPI2 type III secretion systems | Q41481295 | ||
| A bacteriophage encoding a pathogenicity island, a type-IV pilus and a phage receptor in cholera bacteria. | Q41482707 | ||
| Control of the ToxR virulence regulon in Vibrio cholerae by environmental stimuli | Q41627054 | ||
| Identification of a pilus colonization factor that is coordinately regulated with cholera toxin | Q41817439 | ||
| Update on canine streptococcal toxic shock syndrome and necrotizing fasciitis. | Q42146370 | ||
| Morphology of temperate bacteriophage SfV and characterisation of the DNA packaging and capsid genes: the structural genes evolved from two different phage families | Q42597646 | ||
| Organization of the botulinum neurotoxin C1 gene and its associated non-toxic protein genes in Clostridium botulinum C 468. | Q42598126 | ||
| The prophages of Lactobacillus johnsonii NCC 533: comparative genomics and transcription analysis | Q42622028 | ||
| Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages | Q42628295 | ||
| Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak | Q42638697 | ||
| P433 | issue | 3 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | bacterial evolution | Q115395667 |
| P304 | page(s) | 560-602, table of contents | |
| P577 | publication date | 2004-09-01 | |
| P1433 | published in | Microbiology and Molecular Biology Reviews | Q6839270 |
| P1476 | title | Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion | |
| P478 | volume | 68 |
| Q42203667 | "Candidatus Liberibacter asiaticus" prophage late genes may limit host range and culturability |
| Q63968591 | 'Blooming' in the gut: how dysbiosis might contribute to pathogen evolution |
| Q37717103 | A Novel Staphylococcus Podophage Encodes a Unique Lysin with Unusual Modular Design |
| Q36158720 | A Pair of Identical Twins Discordant for Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Differ in Physiological Parameters and Gut Microbiome Composition |
| Q26747503 | A Role for the Intestinal Microbiota and Virome in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS)? |
| Q64273667 | A Viral Ecogenomics Framework To Uncover the Secrets of Nature's "Microbe Whisperers" |
| Q47916027 | A century of the phage: past, present and future |
| Q36399953 | A chromosomally integrated bacteriophage in invasive meningococci |
| Q41616901 | A conformational switch involved in maturation of Staphylococcus aureus bacteriophage 80α capsids |
| Q50962863 | A new perspective on lysogeny: prophages as active regulatory switches of bacteria. |
| Q41490282 | A novel inducible prophage from the mycosphere inhabitant Paraburkholderia terrae BS437. |
| Q36163160 | A novel phage element of Salmonella enterica serovar Enteritidis P125109 contributes to accelerated type III secretion system 2-dependent early inflammation kinetics in a mouse colitis model |
| Q52672159 | A novel prophage identified in strains from Salmonella enterica serovar Enteritidis is a phylogenetic signature of the lineage ST-1974. |
| Q28493142 | A phage protein that inhibits the bacterial ATPase required for type IV pilus assembly |
| Q28607498 | A phylogenomic data-driven exploration of viral origins and evolution |
| Q41594585 | A prophage tail-like protein is deployed by Burkholderia bacteria to feed on fungi |
| Q38010491 | A review of the ecology, genomics, and stress response of Listeria innocua and Listeria monocytogenes |
| Q37399451 | A role for the DtxR family of metalloregulators in gram-positive pathogenesis |
| Q37122084 | A super-family of transcriptional activators regulates bacteriophage packaging and lysis in Gram-positive bacteria. |
| Q91973669 | A theoretical model of temperate phages as mediators of gut microbiome dysbiosis |
| Q89544325 | A window into lysogeny: revealing temperate phage biology with transcriptomics |
| Q46273435 | Ability of phages to infect Acinetobacter calcoaceticus-Acinetobacter baumannii complex species through acquisition of different pectate lyase depolymerase domains |
| Q42957314 | Abortive infection mechanisms and prophage sequences significantly influence the genetic makeup of emerging lytic lactococcal phages. |
| Q39916160 | Absence of lysogeny in wild populations of Erwinia amylovora and Pantoea agglomerans |
| Q36045875 | Accounting for reciprocal host-microbiome interactions in experimental science |
| Q50087104 | Acid resistance variability among isolates of Salmonella enterica serovar Typhimurium DT104. |
| Q42077201 | Activation of the Vibrio cholerae SOS response is not required for intestinal cholera toxin production or colonization |
| Q37451290 | Acyl-homoserine lactones can induce virus production in lysogenic bacteria: an alternative paradigm for prophage induction |
| Q51275252 | Aeromonas salmonicida subsp. salmonicida strains isolated from Chinese freshwater fish contain a novel genomic island and possible regional-specific mobile genetic elements profiles. |
| Q40147624 | Aggregates of bacteriophage 0305phi8-36 seed future growth |
| Q50288424 | Altered Distribution of RNA Polymerase Lacking the Omega Subunit within the Prophages along the Escherichia coli K-12 Genome. |
| Q33582122 | Alternative sigma factor sigmaH modulates prophage integration and excision in Staphylococcus aureus |
| Q40286800 | An accessory wall teichoic acid glycosyltransferase protects Staphylococcus aureus from the lytic activity of Podoviridae |
| Q30400883 | An experimental study of phage mediated bactericidal selection & emergence of the El Tor Vibrio cholerae. |
| Q35971575 | An inducible lambdoid prophage encoding cytolethal distending toxin (Cdt-I) and a type III effector protein in enteropathogenic Escherichia coli |
| Q26782837 | An insight of traditional plasmid curing in Vibrio species |
| Q38077273 | An overview of the domestication and impact of the Salmonella mobilome |
| Q34611467 | Analysis of novel mycobacteriophages indicates the existence of different strategies for phage inheritance in mycobacteria |
| Q40011949 | Analysis of the First Temperate Broad Host Range Brucellaphage (BiPBO1) Isolated from B. inopinata |
| Q33805179 | Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts. |
| Q36812463 | Analysis of the phage sequence space: the benefit of structured information |
| Q36836278 | Ancient, recurrent phage attacks and recombination shaped dynamic sequence-variable mosaics at the root of phytoplasma genome evolution |
| Q47118120 | Antagonistic Microbial Interactions: Contributions and Potential Applications for Controlling Pathogens in the Aquatic Systems |
| Q38165668 | Antibacterial bioagents based on principles of bacteriophage biology: an overview |
| Q34447679 | Antibiotic adjuvants: diverse strategies for controlling drug-resistant pathogens. |
| Q39429452 | Antibiotic-resistance and virulence genes in Enterococcus isolated from tropical recreational waters |
| Q92616554 | Antimicrobial Activity of Lactic Acid Bacteria Starters against Acid Tolerant, Antibiotic Resistant, and Potentially Virulent E. coli Isolated from a Fermented Sorghum-Millet Beverage |
| Q37589201 | Applying the ResFinder and VirulenceFinder web-services for easy identification of acquired antibiotic resistance and E. coli virulence genes in bacteriophage and prophage nucleotide sequences. |
| Q89612866 | Approaches to optimize therapeutic bacteriophage and bacteriophage-derived products to combat bacterial infections |
| Q35095802 | Arginine deiminase pathway is far more important than urease for acid resistance and intracellular survival in Laribacter hongkongensis: a possible result of arc gene cassette duplication |
| Q36457215 | Assembly of bacteriophage 80α capsids in a Staphylococcus aureus expression system |
| Q33391053 | Association of a bacteriophage with meningococcal disease in young adults. |
| Q59790211 | Avoidance of recognition sites of restriction-modification systems is a widespread but not universal anti-restriction strategy of prokaryotic viruses |
| Q55424282 | Bacillus safensis FO-36b and Bacillus pumilus SAFR-032: a whole genome comparison of two spacecraft assembly facility isolates. |
| Q34637653 | Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities |
| Q38897774 | Bacterial Suppression of RNA Polymerase II-Dependent Host Gene Expression. |
| Q38384082 | Bacterial genome remodeling through bacteriophage recombination. |
| Q34702436 | Bacterial pathogenomics |
| Q61772488 | Bacterial ‘Grounded’ Prophages: Hotspots for Genetic Renovation and Innovation |
| Q37447057 | Bacteriophage WO Can Mediate Horizontal Gene Transfer in Endosymbiotic Wolbachia Genomes |
| Q91644478 | Bacteriophage and the Innate Immune System: Access and Signaling |
| Q38415038 | Bacteriophage and their potential roles in the human oral cavity |
| Q47230329 | Bacteriophage evolution differs by host, lifestyle and genome. |
| Q36440552 | Bacteriophage replication modules |
| Q34933698 | Bacteriophage resistance mechanisms in the fish pathogen Flavobacterium psychrophilum: linking genomic mutations to changes in bacterial virulence factors |
| Q58780929 | Bacteriophages Contribute to Shaping Species |
| Q38975521 | Bacteriophages and its applications: an overview |
| Q41172706 | Bacteriophages are the major drivers of Shigella flexneri serotype 1c genome plasticity: a complete genome analysis. |
| Q37911731 | Bacteriophages as vehicles of the resistome in cystic fibrosis. |
| Q91650335 | Bacteriophages benefit from generalized transduction |
| Q90468698 | Bacteriophages: Uncharacterized and Dynamic Regulators of the Immune System |
| Q35148271 | Bacteriophages: an underestimated role in human and animal health? |
| Q55531891 | Beyond Bacteria: Bacteriophage-Eukaryotic Host Interactions Reveal Emerging Paradigms of Health and Disease. |
| Q42243130 | Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments |
| Q24628207 | CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III |
| Q29617488 | CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea |
| Q39675245 | CRISPR-Cas Defense System and Potential Prophages in Cyanobacteria Associated with the Coral Black Band Disease |
| Q34470094 | CRISPR-Cas systems in the marine actinomycete Salinispora: linkages with phage defense, microdiversity and biogeography. |
| Q50026001 | CRISPR-Cas-Mediated Phage Resistance Enhances Horizontal Gene Transfer by Transduction. |
| Q35922128 | Carriage of λ Latent Virus Is Costly for Its Bacterial Host due to Frequent Reactivation in Monoxenic Mouse Intestine |
| Q38214603 | Challenges and future prospects of antibiotic therapy: from peptides to phages utilization. |
| Q35604198 | Chaperone-assisted excisive recombination, a solitary role for DnaJ (Hsp40) chaperone in lysogeny escape |
| Q41427700 | Characterization and complete genome sequence analysis of Staphylococcus aureus bacteriophage JS01. |
| Q36323731 | Characterization and interstrain transfer of prophage pp3 of Pseudomonas aeruginosa |
| Q90062638 | Characterization of Bacteria and Inducible Phages in an Intensive Care Unit |
| Q37141037 | Characterization of DicB by partially masking its potent inhibitory activity of cell division. |
| Q40582033 | Characterization of Functional Prophages in Clostridium difficile. |
| Q92752746 | Characterization of Non-O157 Escherichia coli from Cattle Faecal Samples in the North-West Province of South Africa |
| Q41583880 | Characterization of novel phages isolated in coagulase-negative staphylococci reveals evolutionary relationships with Staphylococcus aureus phages. |
| Q38848131 | Characterization of temperate phages infecting Clostridium difficile isolates of human and animal origins. |
| Q35817097 | Characterization of the ELPhiS prophage from Salmonella enterica serovar Enteritidis strain LK5. |
| Q36303585 | Characterization of the Prophage Repertoire of African Salmonella Typhimurium ST313 Reveals High Levels of Spontaneous Induction of Novel Phage BTP1. |
| Q33290138 | Characterization of the dsDNA prophage sequences in the genome of Neisseria gonorrhoeae and visualization of productive bacteriophage |
| Q34723896 | Characterization of the relationship between integrase, excisionase and antirepressor activities associated with a superinfecting Shiga toxin encoding bacteriophage |
| Q40531516 | Characterization of the temperate phage vB_RleM_PPF1 and its site-specific integration into the Rhizobium leguminosarum F1 genome |
| Q42406138 | Characterization of verotoxin-encoding phages from Escherichia coli O103:H2 strains of bovine and human origins |
| Q54204996 | Cheating, facilitation and cooperation regulate the effectiveness of phage-encoded exotoxins as antipredator molecules. |
| Q37384964 | Chlamydia trachomatis diversity viewed as a tissue-specific coevolutionary arms race |
| Q38243813 | Chromosomal islands of Streptococcus pyogenes and related streptococci: molecular switches for survival and virulence |
| Q33801728 | Classification and quantification of bacteriophage taxa in human gut metagenomes |
| Q35328032 | Classification of prokaryotic genetic replicators: between selfishness and altruism |
| Q34320438 | Clinical isolates of Shiga toxin 1a-producing Shigella flexneri with an epidemiological link to recent travel to Hispañiola |
| Q59358601 | Close Encounters of Three Kinds: Bacteriophages, Commensal Bacteria, and Host Immunity |
| Q34022644 | Clostridium perfringens bacteriophages ΦCP39O and ΦCP26F: genomic organization and proteomic analysis of the virions |
| Q34067038 | Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4 |
| Q41902946 | CodaChrome: a tool for the visualization of proteome conservation across all fully sequenced bacterial genomes. |
| Q38044859 | Coevolution of bacteria and their viruses |
| Q35388463 | Coincidental loss of bacterial virulence in multi-enemy microbial communities |
| Q36672715 | Collateral effects of antibiotics: carbadox and metronidazole induce VSH-1 and facilitate gene transfer among Brachyspira hyodysenteriae strains |
| Q41676286 | Combining Comprehensive Analysis of Off-Site Lambda Phage Integration with a CRISPR-Based Means of Characterizing Downstream Physiology |
| Q35794069 | Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome |
| Q36191555 | Community-associated methicillin-resistant Staphylococcus aureus and its emerging virulence |
| Q47237426 | Comparative Analysis of 37 Acinetobacter Bacteriophages. |
| Q92972434 | Comparative Genome Analysis of Uropathogenic Morganella morganii Strains |
| Q35759419 | Comparative analysis of multiple inducible phages from Mannheimia haemolytica. |
| Q25255956 | Comparative analysis of tandem T7-like promoter containing regions in enterobacterial genomes reveals a novel group of genetic islands. |
| Q34550033 | Comparative genome analysis of Spiroplasma melliferum IPMB4A, a honeybee-associated bacterium. |
| Q30426034 | Comparative genome analysis of the high pathogenicity Salmonella Typhimurium strain UK-1. |
| Q37027900 | Comparative genome sequencing identifies a prophage-associated genomic island linked to host adaptation of Lawsonia intracellularis infections |
| Q33490812 | Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content |
| Q33696325 | Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals |
| Q42119278 | Comparative genomic and transcriptomic analyses reveal habitat differentiation and different transcriptional responses during pectin metabolism in Alishewanella species |
| Q35075693 | Comparative genomic hybridization analysis of Enterococcus faecalis: identification of genes absent from food strains |
| Q36377423 | Comparative genomics and stx phage characterization of LEE-negative Shiga toxin-producing Escherichia coli |
| Q40075687 | Comparative genomics of Australian and international isolates of Salmonella Typhimurium: correlation of core genome evolution with CRISPR and prophage profiles |
| Q44438860 | Comparative genomics of Lactobacillus sakei with emphasis on strains from meat |
| Q24559925 | Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages |
| Q34500172 | Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions. |
| Q38352283 | Comparison of assembled Clostridium botulinum A1 genomes revealed their evolutionary relationship |
| Q41507362 | Complete Genome sequence of the nematicidal Bacillus thuringiensis MYBT18246. |
| Q35945516 | Complete genome of Staphylococcus aureus Tager 104 provides evidence of its relation to modern systemic hospital-acquired strains |
| Q36573717 | Complete genome sequence of bacteriophage VvAW1, which infects Vibrio vulnificus |
| Q89072967 | Complete genome sequence of the sesame pathogen Ralstonia solanacearum strain SEPPX 05 |
| Q42675636 | Complete genome sequence of ΦMH1, a Leuconostoc temperate phage |
| Q41885165 | Complete genomic sequence of bacteriophage phiEcoM-GJ1, a novel phage that has myovirus morphology and a podovirus-like RNA polymerase. |
| Q40734728 | Computational prospecting the great viral unknown. |
| Q41760159 | Conditional tolerance of temperate phages via transcription-dependent CRISPR-Cas targeting |
| Q34901491 | Context-dependent competition in a model gut bacterial community |
| Q33295386 | Contribution of exogenous genetic elements to the group A Streptococcus metagenome |
| Q54440333 | Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. |
| Q91386159 | Coordination of cohabiting phage elements supports bacteria-phage cooperation |
| Q37545851 | Core lipopolysaccharide-specific phage SSU5 as an Auxiliary Component of a Phage Cocktail for Salmonella biocontrol |
| Q37409377 | Corrected Genome Annotations Reveal Gene Loss and Antibiotic Resistance as Drivers in the Fitness Evolution of Salmonella enterica Serovar Typhimurium |
| Q34427628 | Correlations between bacterial ecology and mobile DNA. |
| Q34268448 | Corynebacterium ulcerans 0102 carries the gene encoding diphtheria toxin on a prophage different from the C. diphtheriae NCTC 13129 prophage. |
| Q90169562 | Cross-Regulation between Bacteria and Phages at a Posttranscriptional Level |
| Q26741962 | Cryptic prophages as targets for drug development |
| Q28744104 | Cryptic prophages help bacteria cope with adverse environments |
| Q90131492 | Cryptic-Prophage-Encoded Small Protein DicB Protects Escherichia coli from Phage Infection by Inhibiting Inner Membrane Receptor Proteins |
| Q38700377 | Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34. |
| Q43215394 | Cytolethal distending toxin type I and type IV genes are framed with lambdoid prophage genes in extraintestinal pathogenic Escherichia coli. |
| Q34038379 | Dealing with the evolutionary downside of CRISPR immunity: bacteria and beneficial plasmids |
| Q37273419 | Decreasing Enterobacter sakazakii (Cronobacter spp.) food contamination level with bacteriophages: prospects and problems |
| Q39892227 | Demonstration of cotranscription and 1-methyl-3-nitroso-nitroguanidine induction of a 30-gene operon of Borrelia burgdorferi: evidence that the 32-kilobase circular plasmids are prophages |
| Q36972421 | Design and Synthesis of Molecular Scaffolds with Anti-infective Activity. |
| Q34563312 | Detailed genomic analysis of the Wbeta and gamma phages infecting Bacillus anthracis: implications for evolution of environmental fitness and antibiotic resistance |
| Q37127708 | Development of a prophage typing system and analysis of prophage carriage in Streptococcus pneumoniae |
| Q34418832 | Differential infection properties of three inducible prophages from an epidemic strain of Pseudomonas aeruginosa. |
| Q34459570 | Disease-specific alterations in the enteric virome in inflammatory bowel disease |
| Q35018879 | Disentangling the relative influence of bacterioplankton phylogeny and metabolism on lysogeny in reservoirs and lagoons |
| Q41099231 | Distribution and function of prophage phiRv1 and phiRv2 among Mycobacterium tuberculosis complex |
| Q41890588 | Distribution of Gifsy-3 and of variants of ST64B and Gifsy-1 prophages amongst Salmonella enterica Serovar Typhimurium isolates: evidence that combinations of prophages promote clonality |
| Q41911735 | Distribution, functional expression, and genetic organization of Cif, a phage-encoded type III-secreted effector from enteropathogenic and enterohemorrhagic Escherichia coli. |
| Q38087543 | Diverse functions of restriction-modification systems in addition to cellular defense |
| Q35077210 | Diverse geno- and phenotypes of persistent Listeria monocytogenes isolates from fermented meat sausage production facilities in Portugal |
| Q34279867 | Diverse temperate bacteriophage carriage in Clostridium difficile 027 strains |
| Q34304410 | Diversity in bacterial lysis systems: bacteriophages show the way. |
| Q35573487 | Diversity of Shiga Toxin-Producing Escherichia coli (STEC) O26:H11 Strains Examined via stx Subtypes and Insertion Sites of Stx and EspK Bacteriophages. |
| Q48121977 | Diversity of phage integrases in Enterobacteriaceae: development of markers for environmental analysis of temperate phages |
| Q33919763 | Diversity of prophage DNA regions of Streptococcus agalactiae clonal lineages from adults and neonates with invasive infectious disease |
| Q92761559 | Diversity patterns of bacteriophages infecting Aggregatibacter and Haemophilus species across clades and niches |
| Q35922218 | DnaJ (Hsp40 protein) binding to folded substrate impacts KplE1 prophage excision efficiency |
| Q46945203 | Do Viruses Exchange Genes across Superkingdoms of Life? |
| Q36099106 | Dormant phages of Helicobacter pylori reveal distinct populations in Europe |
| Q42379992 | Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhimurium Q1. |
| Q47140427 | Draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, BS007, BS110 and BS437. |
| Q92526760 | Dysregulation of Intestinal Epithelial Cell RIPK Pathways Promotes Chronic Inflammation in the IBD Gut |
| Q99616572 | Early termination of the Shiga toxin transcript generates a regulatory small RNA |
| Q49566110 | Ecological and Evolutionary Benefits of Temperate Phage: What Does or Doesn't Kill You Makes You Stronger. |
| Q34483463 | Effect of antibiotic treatment on bacteriophage production by a cystic fibrosis epidemic strain of Pseudomonas aeruginosa. |
| Q89944231 | Efficacy of Bacteriophages Against Staphylococcus aureus Isolates from Bovine Mastitis |
| Q21132543 | Electron microscopic, genetic and protein expression analyses of Helicobacter acinonychis strains from a Bengal tiger |
| Q35877971 | Elimination of Chromosomal Island SpyCIM1 from Streptococcus pyogenes Strain SF370 Reverses the Mutator Phenotype and Alters Global Transcription |
| Q37428539 | Emerging Concepts on the Gut Microbiome and Multiple Sclerosis. |
| Q28087251 | Emerging methods to study bacteriophage infection at the single-cell level |
| Q34032322 | Emerging view of the human virome |
| Q34765413 | Enterococcus faecalis prophage dynamics and contributions to pathogenic traits |
| Q36492970 | Entry and killing of Tetrahymena thermophila by bacterially produced Shiga toxin |
| Q40307424 | Environmental Viral Genomes Shed New Light on Virus-Host Interactions in the Ocean. |
| Q33943784 | Environmental bacteriophages: viruses of microbes in aquatic ecosystems |
| Q38861360 | Environmental drivers of viral community composition in Antarctic soils identified by viromics |
| Q41017354 | Escherichia coli nfuA is essential for maintenance of Shiga toxin phage Min27 lysogeny under iron-depleted condition |
| Q34860277 | Evidence of antimicrobial resistance-conferring genetic elements among pneumococci isolated prior to 1974 |
| Q41592976 | Evidence of in vivo prophage induction during Clostridium difficile infection. |
| Q36993455 | Evolution and pathogenesis of Staphylococcus aureus: lessons learned from genotyping and comparative genomics |
| Q28763182 | Evolution and the complexity of bacteriophages |
| Q42369791 | Evolution of Salmonella-Host Cell Interactions through a Dynamic Bacterial Genome |
| Q39322429 | Evolution of bacterial virulence |
| Q42910807 | Evolution of temperate pathogens: the bacteriophage/bacteria paradigm |
| Q34025731 | Evolutionarily conserved orthologous families in phages are relatively rare in their prokaryotic hosts |
| Q92188758 | Evolutionary Diversity of Prophage DNA in Klebsiella pneumoniae Chromosomes |
| Q26740457 | Evolutionary Ecology of Prokaryotic Immune Mechanisms |
| Q55106868 | Evolutionary History of Bacteriophages in the Genus Paraburkholderia. |
| Q34077145 | Evolutionary consequences of intra-patient phage predation on microbial populations |
| Q30962327 | Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement |
| Q34031750 | Evolutionary genomics of a temperate bacteriophage in an obligate intracellular bacteria (Wolbachia). |
| Q35881704 | Existence of a Colonizing Staphylococcus aureus Strain Isolated in Diabetic Foot Ulcers. |
| Q36105796 | Experimental evolution and bacterial resistance: (co)evolutionary costs and trade-offs as opportunities in phage therapy research |
| Q21563463 | Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform |
| Q34618204 | Expression of a novel P22 ORFan gene reveals the phage carrier state in Salmonella typhimurium. |
| Q37508193 | Factors behind junk DNA in bacteria |
| Q37461888 | Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste |
| Q34235118 | Finding a needle in the virus metagenome haystack--micro-metagenome analysis captures a snapshot of the diversity of a bacteriophage armoire |
| Q60044243 | Finer-Scale Phylosymbiosis: Insights from Insect Viromes |
| Q50540618 | Fixed points and limit cycles in the population dynamics of lysogenic viruses and their hosts. |
| Q41826836 | Focal point theory models for dissecting dynamic duality problems of microbial infections |
| Q47281773 | Fossil record of an archaeal HK97-like provirus. |
| Q46931513 | Frequent gene fissions associated with human pathogenic bacteria |
| Q28072295 | Friendly Fire: Biological Functions and Consequences of Chromosomal Targeting by CRISPR-Cas Systems |
| Q36353397 | From cholera to corals: Viruses as drivers of virulence in a major coral bacterial pathogen |
| Q37261990 | Functional and Evolutionary Characterization of a Gene Transfer Agent's Multilocus "Genome" |
| Q111741970 | Functional genome mining and taxono‐genomics reveal eco‐physiological traits and species distinctiveness of aromatic‐degrading Pseudomonas bharatica sp. nov. |
| Q36074543 | Functional profiling of cyanobacterial genomes and its role in ecological adaptations |
| Q33914017 | Functional similarities between phage lambda Orf and Escherichia coli RecFOR in initiation of genetic exchange |
| Q90639128 | Functions of the Microbiota for the Physiology of Animal Metaorganisms |
| Q42115848 | Fur negatively regulates hns and is required for the expression of HilA and virulence in Salmonella enterica serovar Typhimurium |
| Q56899469 | Gene order constrains adaptation in bacteriophage T7 |
| Q34280258 | Gene transfer agents: phage-like elements of genetic exchange |
| Q35744602 | Genes Required for Free Phage Production are Essential for Pseudomonas aeruginosa Chronic Lung Infections. |
| Q42026570 | Genetic and life-history traits associated with the distribution of prophages in bacteria. |
| Q41459172 | Genetic cargo and bacterial species set the rate of vesicle-mediated horizontal gene transfer |
| Q41752112 | Genetic mechanisms underlying the pathogenicity of cold-stressed Salmonella enterica serovar typhimurium in cultured intestinal epithelial cells |
| Q91522748 | Genetically similar temperate phages form coalitions with their shared host that lead to niche-specific fitness effects |
| Q64115725 | Genome analysis of Paenibacillus polymyxa A18 gives insights into the features associated with its adaptation to the termite gut environment |
| Q41992543 | Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli |
| Q42773690 | Genome analysis of the staphylococcal temperate phage DW2 and functional studies on the endolysin and tail hydrolase |
| Q35149048 | Genome rearrangements can make and break small RNA genes |
| Q36844980 | Genome sequence and characteristics of Lrm1, a prophage from industrial Lactobacillus rhamnosus strain M1 |
| Q35695747 | Genome sequence and comparative analysis of a putative entomopathogenic Serratia isolated from Caenorhabditis briggsae. |
| Q21142635 | Genome sequence of Cronobacter sakazakii BAA-894 and comparative genomic hybridization analysis with other Cronobacter species |
| Q28646076 | Genome sequence of the Drosophila melanogaster male-killing Spiroplasma strain MSRO endosymbiont |
| Q37247859 | Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis |
| Q35565894 | Genome sequencing reveals a phage in Helicobacter pylori. |
| Q37186442 | Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences. |
| Q54994074 | Genome-Guided Analysis of Clostridium ultunense and Comparative Genomics Reveal Different Strategies for Acetate Oxidation and Energy Conservation in Syntrophic Acetate-Oxidising Bacteria. |
| Q36845551 | Genomic O island 122, locus for enterocyte effacement, and the evolution of virulent verocytotoxin-producing Escherichia coli. |
| Q58603585 | Genomic analysis of Acinetobacter baumannii prophages reveals remarkable diversity and suggests profound impact on bacterial virulence and fitness |
| Q100395108 | Genomic analysis reveals high virulence and antibiotic resistance amongst phage susceptible Acinetobacter baumannii |
| Q89553734 | Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes |
| Q37308710 | Genomic characterisation of invasive non-typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans isolates from Malawi |
| Q42249846 | Genomic characterization and integrative properties of phiSMA6 and phiSMA7, two novel filamentous bacteriophages of Stenotrophomonas maltophilia. |
| Q24657789 | Genomic characterization of Ralstonia solanacearum phage phiRSA1 and its related prophage (phiRSX) in strain GMI1000 |
| Q42123619 | Genomic characterization of Ralstonia solanacearum phage phiRSB1, a T7-like wide-host-range phage |
| Q40983100 | Genomic characterization of Salmonella bacteriophages isolated from India |
| Q33762297 | Genomic characterization of the Yersinia genus |
| Q58725541 | Genomic characterization of three novel Basilisk-like phages infecting Bacillus anthracis |
| Q34297779 | Genomic characterization of two Staphylococcus epidermidis bacteriophages with anti-biofilm potential |
| Q34831811 | Genomic characterization provides new insight into Salmonella phage diversity |
| Q34469643 | Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2 |
| Q35020468 | Genomic diversity and adaptation of Salmonella enterica serovar Typhimurium from analysis of six genomes of different phage types |
| Q33477996 | Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complex |
| Q33422960 | Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens |
| Q42690364 | Genomic sequence of temperate phage TEM126 isolated from wild type S. aureus |
| Q37644329 | Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins |
| Q24681753 | Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum |
| Q39059706 | Genotype Cluster Analysis in Pathogenic Escherichia coli Isolates Producing Different CDT Types |
| Q33384593 | Genotypic and phenotypic diversity among induced, stx2-carrying bacteriophages from environmental Escherichia coli strains |
| Q35028824 | Global proteomic analysis of two tick-borne emerging zoonotic agents: anaplasma phagocytophilum and ehrlichia chaffeensis. |
| Q42177063 | Global transcriptional response of Clostridium difficile carrying the CD38 prophage |
| Q92071258 | Gut Bacteriophage: Current Understanding and Challenges |
| Q26822006 | Gut inflammation and immunity: what is the role of the human gut virome? |
| Q92176974 | Gut mucosal virome alterations in ulcerative colitis |
| Q50074672 | H-NS, the genome sentinel. |
| Q36360827 | Heat shock and prolonged heat stress attenuate neurotoxin and sporulation gene expression in group I Clostridium botulinum strain ATCC 3502. |
| Q40252907 | Heterogeneity in phage induction enables the survival of the lysogenic population. |
| Q46090917 | High Throughput Sequencing for Detection of Foodborne Pathogens. |
| Q33778273 | High viral abundance as a consequence of low viral decay in the Baltic Sea redoxcline |
| Q82593048 | High-frequency phage-mediated gene transfer in freshwater environments determined at single-cell level |
| Q51700211 | Horizontal gene transfer between bacteria. |
| Q34081955 | Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses |
| Q37867038 | Horizontal gene transfers with or without cell fusions in all categories of the living matter |
| Q34039251 | Horizontally transferred genetic elements and their role in pathogenesis of bacterial disease |
| Q61804667 | Host-hijacking and planktonic piracy: how phages command the microbial high seas |
| Q37012231 | Host-pathogen interplay and the evolution of bacterial effectors |
| Q34347100 | How hyperthermophiles adapt to change their lives: DNA exchange in extreme conditions |
| Q36094716 | Human Serum-Specific Activation of Alternative Sigma Factors, the Stress Responders in Aggregatibacter actinomycetemcomitans |
| Q33883731 | Human volunteers receiving Escherichia coli phage T4 orally: a safety test of phage therapy |
| Q28728986 | Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission |
| Q42284018 | Identification and characterization of the immunity repressor (ImmR) that controls the mobile genetic element ICEBs1 of Bacillus subtilis |
| Q35869062 | Identification of PblB mediating galactose-specific adhesion in a successful Streptococcus pneumoniae clone |
| Q58698991 | Identification of Prophages and Prophage Remnants within the Genome ofAvibacterium paragallinarumBacterium |
| Q38285572 | Identification of Rgg binding sites in the Streptococcus pyogenes chromosome |
| Q36710680 | Identification of a novel prophage-like gene cluster actively expressed in both virulent and avirulent strains of Leptospira interrogans serovar Lai |
| Q41448189 | Identification of accessory genome regions in poultry Clostridium perfringens isolates carrying the netB plasmid |
| Q34206889 | Identification of genes expressed in cultures of E. coli lysogens carrying the Shiga toxin-encoding prophage Φ24B. |
| Q33306681 | Identification of prophages in bacterial genomes by dinucleotide relative abundance difference |
| Q35659670 | Identification of staphylococcal phage with reduced transcription in human blood through transcriptome sequencing |
| Q35231600 | Identifying and analyzing bacteriophages in human fecal samples: what could we discover? |
| Q40044171 | Immunogenicity and antimicrobial effectiveness of Pseudomonas aeruginosa specific bacteriophage in a human lung in vitro model. |
| Q51827564 | Impact of CRIPSR immunity on the emergence of bacterial pathogens. |
| Q35053785 | Implication of lateral genetic transfer in the emergence of Aeromonas hydrophila isolates of epidemic outbreaks in channel catfish |
| Q28289474 | Importance of prophages to evolution and virulence of bacterial pathogens |
| Q42182415 | Improving detection of Shiga toxin-producing Escherichia coli by molecular methods by reducing the interference of free Shiga toxin-encoding bacteriophages |
| Q84449215 | In vivo replication of T4 and T7 bacteriophages in germ-free mice colonized with Escherichia coli |
| Q34151018 | Increased excision of the Salmonella prophage ST64B caused by a deficiency in Dam methylase. |
| Q35973007 | Independent Co-Option of a Tailed Bacteriophage into a Killing Complex in Pseudomonas |
| Q36235373 | Inducible Clostridium perfringens bacteriophages ΦS9 and ΦS63: Different genome structures and a fully functional sigK intervening element |
| Q44879629 | Induction and characterization of lysogenic bacteriophages from Streptococcus iniae. |
| Q34719180 | Induction of multiple prophages from a marine bacterium: a genomic approach |
| Q40290785 | Inflammation boosts bacteriophage transfer between Salmonella spp. |
| Q34595599 | Influence of lysogeny of Tectiviruses GIL01 and GIL16 on Bacillus thuringiensis growth, biofilm formation, and swarming motility |
| Q41895322 | Influence of the Escherichia coli oxyR gene function on lambda prophage maintenance |
| Q35629390 | Inorganic polyphosphate essential for lytic growth of phages P1 and fd. |
| Q43029200 | Insertion sequences enrichment in extreme Red sea brine pool vent. |
| Q36098359 | Insertion site occupancy by stx2 bacteriophages depends on the locus availability of the host strain chromosome |
| Q28078376 | Insights on the Horizontal Gene Transfer of Carbapenemase Determinants in the Opportunistic Pathogen Acinetobacter baumannii |
| Q58599272 | Intensive targeting of regulatory competence genes by transposable elements in streptococci |
| Q43215116 | Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa |
| Q37727893 | Interaction of Type IV Toxin/Antitoxin Systems in Cryptic Prophages of Escherichia coli K-12. |
| Q61813504 | Interactions between Bacteriophage, Bacteria, and the Mammalian Immune System |
| Q38846031 | Interplay of regulatory RNAs and mobile genetic elements in enteric pathogens |
| Q34236995 | Intracellular Streptococcus pyogenes in human macrophages display an altered gene expression profile |
| Q38821898 | Intriguing Interaction of Bacteriophage-Host Association: An Understanding in the Era of Omics |
| Q35675668 | Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire |
| Q47114256 | Is Genetic Mobilization Considered When Using Bacteriophages in Antimicrobial Therapy? |
| Q35801629 | Isolation and Characterization of Lytic Properties of Bacteriophages Specific for M. haemolytica Strains |
| Q35478867 | Isolation and characterization of a native avirulent strain of Streptococcus suis serotype 2: a perspective for vaccine development |
| Q35355446 | Isolation and characterization of vB_ArS-ArV2 - first Arthrobacter sp. infecting bacteriophage with completely sequenced genome |
| Q37663297 | Isolation of Escherichia coli bacteriophages from the stool of pediatric diarrhea patients in Bangladesh |
| Q43331592 | Isolation of salmonella bacteriophages from swine effluent lagoons |
| Q64992410 | Keeping crispr in check: diverse mechanisms of phage-encoded anti-crisprs. |
| Q31151211 | Kingdom-agnostic metagenomics and the importance of complete characterization of enteric microbial communities |
| Q33684497 | Lambda-prophage induction modeled as a cooperative failure mode of lytic repression |
| Q34363345 | Large proportion of genes in one cryptic WO prophage genome are actively and sex-specifically transcribed in a fig wasp species |
| Q40004374 | Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts. |
| Q28385890 | Life-style and genome structure of marine Pseudoalteromonas siphovirus B8b isolated from the northwestern Mediterranean Sea |
| Q40633565 | Links between Transcription, Environmental Adaptation and Gene Variability in Escherichia coli: Correlations between Gene Expression and Gene Variability Reflect Growth Efficiencies |
| Q33665224 | Location of the unique integration site on an Escherichia coli chromosome by bacteriophage lambda DNA in vivo |
| Q39378292 | Long-term evolution of viruses: A Janus-faced balance |
| Q46160715 | Lysogenic Conversion of the Phytopathogen Ralstonia solanacearum by the P2virus ϕRSY1. |
| Q34552272 | Lysogenic Streptococcus suis isolate SS2-4 containing prophage SMP showed increased mortality in zebra fish compared to the wild-type isolate |
| Q34539675 | Lysogenic transfer of group A Streptococcus superantigen gene among Streptococci |
| Q57167876 | Lysogenization of Staphylococcus aureus RN450 by phages ϕ11 and ϕ80α leads to the activation of the SigB regulon |
| Q39177652 | Lysogeny in nature: mechanisms, impact and ecology of temperate phages |
| Q34276994 | Lysogeny with Shiga toxin 2-encoding bacteriophages represses type III secretion in enterohemorrhagic Escherichia coli. |
| Q35154348 | Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections |
| Q36970741 | Mapping and regulation of genes within Salmonella pathogenicity island 12 that contribute to in vivo fitness of Salmonella enterica Serovar Typhimurium |
| Q35058934 | Marine viruses, a genetic reservoir revealed by targeted viromics |
| Q64271021 | May the Phage be With You? Prophage-Like Elements in the Genomes of Soft Rot : spp. and spp |
| Q36846097 | Mechanisms that Determine the Differential Stability of Stx⁺ and Stx(-) Lysogens |
| Q91130388 | Metabolic and biogeochemical consequences of viral infection in aquatic ecosystems |
| Q35757493 | Metagenomic Analysis of Crohn's Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers |
| Q47550806 | Metavirome Sequencing of the Termite Gut Reveals the Presence of an Unexplored Bacteriophage Community. |
| Q88990080 | Microbial genomic island discovery, visualization and analysis |
| Q41659888 | Microbiological Impact of the Use of Reclaimed Wastewater in Recreational Parks. |
| Q92921981 | Microbiota-Immune Interaction in the Pathogenesis of Gut-Derived Infection |
| Q36489643 | Mobile effector proteins on phage genomes |
| Q36312048 | Mobile genetic elements in the bacterial phylum Acidobacteria |
| Q33399917 | Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5. |
| Q34089037 | Mobile genetic elements of Staphylococcus aureus |
| Q36247081 | Mobile genetic elements: the agents of open source evolution |
| Q37906505 | Modern biomolecular mass spectrometry and its role in studying virus structure, dynamics, and assembly. |
| Q37208400 | Molecular Basis for Lytic Bacteriophage Resistance in Enterococci |
| Q97521052 | Molecular Characterization and Comparative Genomic Analysis of vB_PaeP_YA3, a Novel Temperate Bacteriophage of Pseudomonas aeruginosa |
| Q90216917 | Molecular Epidemiological Survey of Prophages in MRSA Isolates in Taiwan |
| Q41919660 | Molecular Mechanisms That Contribute to Horizontal Transfer of Plasmids by the Bacteriophage SPP1. |
| Q35739062 | Molecular and cellular characterization of a Salmonella enterica serovar Paratyphi a outbreak strain and the human immune response to infection |
| Q34041447 | Molecular bases and role of viruses in the human microbiome |
| Q37274986 | Molecular characterization and lytic activities of Streptococcus agalactiae bacteriophages and determination of lysogenic-strain features |
| Q33769683 | Molecular characterization and prophage DNA contents of Streptococcus agalactiae strains isolated from adult skin and osteoarticular infections |
| Q54324834 | Molecular prophage typing of avian pathogenic Escherichia coli. |
| Q40529794 | More Is Better: Selecting for Broad Host Range Bacteriophages |
| Q42121694 | Morphological and genetic diversity of temperate phages in Clostridium difficile |
| Q33214624 | Mosaic prophages with horizontally acquired genes account for the emergence and diversification of the globally disseminated M1T1 clone of Streptococcus pyogenes. |
| Q36254988 | Mosaic structure of Mycobacterium bovis BCG genomes as a representation of phage sequences' mobility. |
| Q26827355 | Movers and shakers: influence of bacteriophages in shaping the mammalian gut microbiota |
| Q33776680 | Multidrug-resistant Salmonella typhimurium, Pacific Northwest, United States |
| Q42121657 | Multilocus characterization scheme for shiga toxin-encoding bacteriophages. |
| Q35036269 | Multilocus sequence typing of Corynebacterium ulcerans provides evidence for zoonotic transmission and for increased prevalence of certain sequence types among toxigenic strains |
| Q39276552 | Ménage à trois in the human gut: interactions between host, bacteria and phages |
| Q41908045 | Narrow-host-range bacteriophages that infect Rhizobium etli associate with distinct genomic types. |
| Q24563742 | Natural solution to antibiotic resistance: bacteriophages 'The Living Drugs' |
| Q37547404 | Neisseria gonorrhoeae filamentous phage NgoΦ6 is capable of infecting a variety of Gram-negative bacteria |
| Q40438911 | Newly isolated Nodularia phage influences cyanobacterial community dynamics |
| Q34941781 | Next generation sequencing analysis of nine Corynebacterium ulcerans isolates reveals zoonotic transmission and a novel putative diphtheria toxin-encoding pathogenicity island |
| Q42228666 | NinR- and red-mediated phage-prophage marker rescue recombination in Escherichia coli: recovery of a nonhomologous immlambda DNA segment by infecting lambdaimm434 phages |
| Q60229441 | Novel Bacteriophages in Enterococcus spp |
| Q37048735 | Novel alternatives to antibiotics: bacteriophages, bacterial cell wall hydrolases, and antimicrobial peptides |
| Q35076244 | Novel bacteriophage therapy for controlling metallo-beta-lactamase producing Pseudomonas aeruginosa infection in catfish. |
| Q40230923 | Occurrence of multidrug resistant Escherichia coli in groundwater of Brij region (Uttar Pradesh) and its public health implications |
| Q42549429 | Oenococcus oeni genome plasticity is associated with fitness. |
| Q38453067 | On genome annotation of Brucellaphage Gadvasu (BpG): discovery of ORFans for integrated systems biology approaches |
| Q50046101 | Optical genetic mapping defines regions of chromosomal variation in serovars of S. enterica subsp. enterica of concern for human and animal health. |
| Q53443544 | Optical mapping and 454 sequencing of Escherichia coli O157 : H7 isolates linked to the US 2006 spinach-associated outbreak. |
| Q54324837 | Oral T4-like phage cocktail application to healthy adult volunteers from Bangladesh. |
| Q21136065 | Orally administered P22 phage tailspike protein reduces salmonella colonization in chickens: prospects of a novel therapy against bacterial infections |
| Q38665220 | Origins and evolution of methicillin-resistant Staphylococcus aureus clonal lineages. |
| Q33396677 | Origins of the Xylella fastidiosa prophage-like regions and their impact in genome differentiation |
| Q38998688 | Paenibacillus larvae-Directed Bacteriophage HB10c2 and Its Application in American Foulbrood-Affected Honey Bee Larvae |
| Q21131299 | Paradigms of pathogenesis: targeting the mobile genetic elements of disease |
| Q41604255 | Pathogenicity island-directed transfer of unlinked chromosomal virulence genes |
| Q35759505 | Phage 3396 from a Streptococcus dysgalactiae subsp. equisimilis pathovar may have its origins in streptococcus pyogenes |
| Q59358470 | Phage Genetic Engineering Using CRISPR⁻Cas Systems |
| Q55299223 | Phage Therapy: Beyond Antibacterial Action. |
| Q38911928 | Phage Therapy: Future Inquiries |
| Q59360291 | Phage Therapy: What Have We Learned? |
| Q57167384 | Phage morons play important roles in controlling phenotypes |
| Q34305484 | Phage mutations in response to CRISPR diversification in a bacterial population |
| Q92157109 | Phage tail-like particles are versatile bacterial nanomachines - A mini-review |
| Q37389925 | Phage therapy and photodynamic therapy: low environmental impact approaches to inactivate microorganisms in fish farming plants. |
| Q36199647 | Phage-Like Streptococcus pyogenes Chromosomal Islands (SpyCI) and Mutator Phenotypes: Control by Growth State and Rescue by a SpyCI-Encoded Promoter |
| Q35209312 | Phage-bacteria network analysis and its implication for the understanding of coral disease |
| Q36535766 | Phage-bacterial interactions in the evolution of toxigenic Vibrio cholerae |
| Q34544436 | Phage-driven loss of virulence in a fish pathogenic bacterium |
| Q41583324 | Phage-host interactions during pseudolysogeny: Lessons from the Pid/dgo interaction. |
| Q54290360 | Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity. |
| Q38798883 | Phage-mediated horizontal gene transfer of both prophage and heterologous DNA by ϕBB-1, a bacteriophage of Borrelia burgdorferi |
| Q60949673 | PhageWeb - Web Interface for Rapid Identification and Characterization of Prophages in Bacterial Genomes |
| Q52609381 | Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes. |
| Q28655200 | Phages preying on Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis: past, present and future |
| Q41905338 | Phase variation controls expression of Salmonella lipopolysaccharide modification genes by a DNA methylation-dependent mechanism. |
| Q101469937 | Phenotypic and genomic analysis of isopropanol and 1,3-propanediol producer Clostridium diolis DSM 15410 |
| Q59547518 | Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain |
| Q37336500 | Phylogenomic network and comparative genomics reveal a diverged member of the ΦKZ-related group, marine vibrio phage ΦJM-2012. |
| Q41673157 | Phylogenomic, Pan-genomic, Pathogenomic and Evolutionary Genomic Insights into the Agronomically Relevant Enterobacteria Pantoea ananatis and Pantoea stewartii |
| Q47827875 | Phylogeographic agreement between prophage and bacterial housekeeping genes in Helicobacter pylori strains from The Gambia. |
| Q28608116 | Physiological Function of Rac Prophage During Biofilm Formation and Regulation of Rac Excision in Escherichia coli K-12 |
| Q34041481 | Pilot study to evaluate microarray hybridization as a tool for Salmonella enterica serovar Typhimurium strain differentiation. |
| Q39915199 | Polylysogeny magnifies competitiveness of a bacterial pathogen in vivo |
| Q35867641 | Population genomics and phylogeography of an Australian dairy factory derived lytic bacteriophage |
| Q39690702 | Potential of bacteriophages and their lysins in the treatment of MRSA: current status and future perspectives |
| Q37373592 | Presence of a Prophage Determines Temperature-Dependent Capsule Production in Streptococcus pyogenes. |
| Q41873323 | Presence of pathogenicity island related and plasmid encoded virulence genes in cytolethal distending toxin producing Escherichia coli isolates from diarrheal cases |
| Q21146048 | Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts |
| Q33527764 | Prevalence of Bacillus anthracis-like organisms and bacteriophages in the intestinal tract of the earthworm Eisenia fetida |
| Q34954589 | Prevalence, conservation and functional analysis of Yersinia and Escherichia CRISPR regions in clinical Pseudomonas aeruginosa isolates |
| Q33693993 | Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification |
| Q36969086 | Programmed cell death in bacteria and implications for antibiotic therapy |
| Q90437976 | ProphET, prophage estimation tool: A stand-alone prophage sequence prediction tool with self-updating reference database |
| Q40963946 | Prophage Integrase Typing Is a Useful Indicator of Genomic Diversity in Salmonella enterica |
| Q40286582 | Prophage Provide a Safe Haven for Adaptive Exploration in Temperate Viruses |
| Q47193936 | Prophage Rs551 and Its Repressor Gene orf14 Reduce Virulence and Increase Competitive Fitness of Its Ralstonia solanacearum Carrier Strain UW551. |
| Q36394735 | Prophage as a genetic reservoir: Promoting diversity and driving innovation in the host community |
| Q33406825 | Prophage induction is enhanced and required for renal disease and lethality in an EHEC mouse model |
| Q53692392 | Prophage phiv142-3 enhances the colonization and resistance to environmental stresses of avian pathogenic Escherichia coli. |
| Q28744077 | Prophage spontaneous activation promotes DNA release enhancing biofilm formation in Streptococcus pneumoniae |
| Q36826765 | Prophage-like gene transfer agents-novel mechanisms of gene exchange for Methanococcus, Desulfovibrio, Brachyspira, and Rhodobacter species |
| Q35070110 | Prophage-mediated dynamics of 'Candidatus Liberibacter asiaticus' populations, the destructive bacterial pathogens of citrus huanglongbing |
| Q42595291 | Prophage-stimulated toxin production in Clostridium difficile NAP1/027 lysogens. |
| Q37180847 | Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas? |
| Q44603988 | Prophages of Staphylococcus aureus Newman and their contribution to virulence |
| Q34431692 | Prophagic DNA fragments in Streptococcus agalactiae strains and association with neonatal meningitis |
| Q57900963 | Quantifying Tradeoffs for Marine Viruses |
| Q37444314 | Quorum Regulated Resistance of Vibrio cholerae against Environmental Bacteriophages. |
| Q42984641 | RNA sequencing provides evidence for functional variability between naturally co-existing Alteromonas macleodii lineages |
| Q21135232 | Ralstonia syzygii, the Blood Disease Bacterium and some Asian R. solanacearum strains form a single genomic species despite divergent lifestyles |
| Q53698493 | Rapid Identification of Intact Staphylococcal Bacteriophages Using Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry. |
| Q43652373 | Rapid detection of viruses using electrical biochips and anti-virion sera. |
| Q35849681 | Rapid diversification of coevolving marine Synechococcus and a virus |
| Q36423937 | Rapid evolution of the sequences and gene repertoires of secreted proteins in bacteria |
| Q39763300 | Rapid microcystis cyanophage gene diversification revealed by long- and short-term genetic analyses of the tail sheath gene in a natural pond |
| Q34064693 | Recent genome reduction of Wolbachia in Drosophila recens targets phage WO and narrows candidates for reproductive parasitism |
| Q28391327 | Recombinant expression of two bacteriophage proteins that lyse clostridium perfringens and share identical sequences in the C-terminal cell wall binding domain of the molecules but are dissimilar in their N-terminal active domains |
| Q48084355 | Recovery of temperate Desulfovibrio vulgaris bacteriophage using a novel host strain |
| Q59274011 | Relating Phage Genomes to Population Structure: General Steps Using Whole-Genome Sequencing Data |
| Q64063720 | Remarkable Genome Stability among emm1 Group A Streptococcus in Belgium over 19 Years |
| Q34521272 | Reservoir of bacterial exotoxin genes in the environment. |
| Q28081298 | Resistance and tolerance to foreign elements by prokaryotic immune systems - curating the genome |
| Q47280317 | Resolution of habitat-associated ecogenomic signatures in bacteriophage genomes and application to microbial source tracking. |
| Q33398511 | Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species |
| Q36118037 | Role of phages in the pathogenesis of Burkholderia, or 'Where are the toxin genes in Burkholderia phages?'. |
| Q33745332 | Rrp1, a cyclic-di-GMP-producing response regulator, is an important regulator of Borrelia burgdorferi core cellular functions |
| Q91790583 | Rumen Virus Populations: Technological Advances Enhancing Current Understanding |
| Q44494741 | Safety analysis of a Russian phage cocktail: from metagenomic analysis to oral application in healthy human subjects |
| Q40224804 | Sak and Sak4 recombinases are required for bacteriophage replication in Staphylococcus aureus. |
| Q35321261 | Salmonella Typhimurium strain ATCC14028 requires H2-hydrogenases for growth in the gut, but not at systemic sites |
| Q59349859 | Salmonella enterica Phylogeny Based on Whole-Genome Sequencing Reveals Two New Clades and Novel Patterns of Horizontally Acquired Genetic Elements |
| Q54205011 | Salmonella enterica Prophage Sequence Profiles Reflect Genome Diversity and Can Be Used for High Discrimination Subtyping. |
| Q34146266 | Salmonella phages isolated from dairy farms in Thailand show wider host range than a comparable set of phages isolated from U.S. dairy farms |
| Q47147789 | Scientific Opinion on the maintenance of the list of QPS microorganisms intentionally added to food or feed (2009 update) |
| Q39624150 | Screening of KHP30-like prophages among Japanese Helicobacter pylori strains, and genetic analysis of a defective KHP30-like prophage sequence integrated in the genome of the H. pylori strain NY40. |
| Q33585644 | Searching for a "hidden" prophage in a marine bacterium |
| Q41902649 | Selective binding of Borrelia burgdorferi OspE paralogs to factor H and serum proteins from diverse animals: possible expansion of the role of OspE in Lyme disease pathogenesis. |
| Q33946532 | Selective capture of Salmonella enterica serovar typhi genes expressed in macrophages that are absent from the Salmonella enterica serovar Typhimurium genome |
| Q41928733 | Shiga toxin 2-encoding bacteriophages in human fecal samples from healthy individuals. |
| Q37301976 | Shiga toxin as a bacterial defense against a eukaryotic predator, Tetrahymena thermophila |
| Q55436015 | Shooting the messenger: RNA-targetting CRISPR-Cas systems. |
| Q43506097 | Similar ectopic gene conversion frequencies in the backbone genome of pathogenic and nonpathogenic Escherichia coli strains |
| Q35522146 | Single cell genomics indicates horizontal gene transfer and viral infections in a deep subsurface Firmicutes population |
| Q34408776 | Single-molecule packaging initiation in real time by a viral DNA packaging machine from bacteriophage T4. |
| Q33845132 | Small and Smaller-sRNAs and MicroRNAs in the Regulation of Toxin Gene Expression in Prokaryotic Cells: A Mini-Review |
| Q36059736 | Spatial and temporal dynamics of virus occurrence in two freshwater lakes captured through metagenomic analysis. |
| Q35689269 | SseL is a salmonella-specific translocated effector integrated into the SsrB-controlled salmonella pathogenicity island 2 type III secretion system. |
| Q42119699 | Stability of a Pseudomonas putida KT2440 bacteriophage-carried genomic island and its impact on rhizosphere fitness |
| Q93011594 | Stable Neutralization of a Virulence Factor in Bacteria Using Temperate Phage in the Mammalian Gut |
| Q97692976 | Standardized bacteriophage purification for personalized phage therapy |
| Q64059546 | Staphylococci phages display vast genomic diversity and evolutionary relationships |
| Q54613415 | Staphylococcus aureus isolates from Irish domestic refrigerators possess novel enterotoxin and enterotoxin-like genes and are clonal in nature. |
| Q38103994 | Strangles: taking steps towards eradication |
| Q40051003 | Strategies for editing virulent staphylococcal phages using CRISPR-Cas10. |
| Q37720069 | Strategies to reduce methane emissions from farmed ruminants grazing on pasture |
| Q42254945 | Structural and functional characterization of the Redβ recombinase from bacteriophage λ. |
| Q47717158 | Structural co-evolution of viruses and cells in the primordial world |
| Q33384995 | Structural prediction and mutational analysis of the Gifsy-I Xis protein |
| Q35684071 | Structure and Assembly of TP901-1 Virion Unveiled by Mutagenesis. |
| Q33535898 | Structure, function, and evolution of the Thiomonas spp. genome |
| Q33754014 | Stumbling across the Same Phage: Comparative Genomics of Widespread Temperate Phages Infecting the Fish Pathogen Vibrio anguillarum |
| Q36895665 | Stx-phages: drivers and mediators of the evolution of STEC and STEC-like pathogens |
| Q34698196 | Subclassification and targeted characterization of prophage-encoded two-component cell lysis cassette |
| Q42216222 | Superinfection exclusion reveals heteroimmunity between Pseudomonas aeruginosa temperate phages |
| Q52422473 | Survival of the fittest: a role for phage-encoded eukaryotic-like kinases. |
| Q33452123 | Symbiont genomics, our new tangled bank |
| Q52979005 | Synonymous codon usage bias in 16 Staphylococcus aureus phages: implication in phage therapy. |
| Q24813598 | Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops |
| Q83596267 | T4 phages against Escherichia coli diarrhea: potential and problems |
| Q92524322 | Temperate Bacteriophages from Chronic Pseudomonas aeruginosa Lung Infections Show Disease-Specific Changes in Host Range and Modulate Antimicrobial Susceptibility |
| Q34639543 | Temperate bacterial viruses as double-edged swords in bacterial warfare. |
| Q99551109 | Temperate infection in a virus-host system previously known for virulent dynamics |
| Q35113232 | Temperate phages acquire DNA from defective prophages by relaxed homologous recombination: the role of Rad52-like recombinases |
| Q37126836 | Temperate phages both mediate and drive adaptive evolution in pathogen biofilms |
| Q40463266 | Temperate phages promote colicin-dependent fitness of Salmonella enterica serovar Typhimurium. |
| Q92537986 | The Association of Cell Division Regulated by DicC With the Formation of Viable but Non-culturable Escherichia coli O157:H7 |
| Q33239139 | The Bacillus anthracis chromosome contains four conserved, excision-proficient, putative prophages |
| Q92282164 | The Best of All Worlds: Streptococcus pneumoniae Conjunctivitis through the Lens of Community Ecology and Microbial Biogeography |
| Q39759717 | The CI repressors of Shiga toxin-converting prophages are involved in coinfection of Escherichia coli strains, which causes a down regulation in the production of Shiga toxin 2. |
| Q41106366 | The Clostridium difficile cell wall protein CwpV confers phase-variable phage resistance |
| Q38651010 | The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs |
| Q55655241 | The E. coli Global Regulator DksA Reduces Transcription during T4 Infection. |
| Q57492072 | The Gut Microbiota in the Pathogenesis and Therapeutics of Inflammatory Bowel Disease |
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