Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis

scientific article

Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/EMBOJ/19.9.2115
P3181OpenCitations bibliographic resource ID4979445
P932PMC publication ID305690
P698PubMed publication ID10790377
P5875ResearchGate publication ID12527745

P2093author name stringW Filipowicz
F Nasr
E Billy
T Wegierski
P2860cites workSm and Sm-like proteins assemble in two related complexes of deep evolutionary originQ22009995
The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulationQ22065786
The human RNA 3'-terminal phosphate cyclase is a member of a new family of proteins conserved in Eucarya, Bacteria and Archaea.Q24310092
Sequence similarity between the 73-kilodalton protein of mammalian CPSF and a subunit of yeast polyadenylation factor IQ24321710
RNA 3'-terminal phosphate cyclase activity and RNA ligation in HeLa cell extractQ24609578
Crystal structure of RNA 3'-terminal phosphate cyclase, a ubiquitous enzyme with unusual topologyQ27621335
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysisQ27860815
Imp3p and Imp4p, two specific components of the U3 small nucleolar ribonucleoprotein that are essential for pre-18S rRNA processingQ27930834
Synthetic lethal interactions with conditional poly(A) polymerase alleles identify LCP5, a gene involved in 18S rRNA maturationQ27936255
A U3 snoRNP protein with homology to splicing factor PRP4 and G beta domains is required for ribosomal RNA processingQ27937558
Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families.Q27939047
Mpp10p, a U3 small nucleolar ribonucleoprotein component required for pre-18S rRNA processing in yeastQ27939347
Saccharomyces cerevisiae Nip7p is required for efficient 60S ribosome subunit biogenesis.Q27939938
A simple and efficient method for direct gene deletion in Saccharomyces cerevisiaeQ28131603
The first pre-rRNA-processing event occurs in a large complex: analysis by gel retardation, sedimentation, and UV cross-linkingQ28610566
A family of low and high copy replicative, integrative and single-strandedS. cerevisiae/E. coli shuttle vectorsQ29615752
The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functionsQ29616485
The small nucleolar RNAsQ29616486
Function and synthesis of small nucleolar RNAsQ29618483
Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiaeQ29618484
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiaeQ29620522
A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNAQ29620542
Processing of pre-ribosomal RNA in Saccharomyces cerevisiaeQ29620864
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesisQ29620872
Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNAQ29620875
Functional separation of pre-rRNA processing steps revealed by truncation of the U3 small nucleolar ribonucleoprotein component, Mpp10Q33709433
Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNAQ33937656
The 18S rRNA dimethylase Dim1p is required for pre-ribosomal RNA processing in yeast.Q34297937
The enzymatic conversion of 3'-phosphate terminated RNA chains to 2',3'-cyclic phosphate derivatives.Q34469141
Cyclization of RNA 3'-terminal phosphate by cyclase from HeLa cells proceeds via formation of N(3')pp(5')A activated intermediateQ37678944
Base pairing between U3 small nucleolar RNA and the 5' end of 18S rRNA is required for pre-rRNA processingQ39447158
Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis.Q40789290
The terminal balls characteristic of eukaryotic rRNA transcription units in chromatin spreads are rRNA processing complexesQ49137415
Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA'sQ52443500
New constructs and strategies for efficient PCR-based gene manipulations in yeast.Q52532237
Characterization of the Escherichia coli RNA 3'-terminal phosphate cyclase and its sigma54-regulated operon.Q53946258
Functional base-pairing interaction between highly conserved elements of U3 small nucleolar RNA and the small ribosomal subunit RNAQ56903372
Ribosomal precursor particles from yeastQ66919166
RNA 3'-terminal phosphate cyclase from HeLa cellsQ68532008
Isolation of S. cerevisiae snRNPs: comparison of U1 and U4/U6.U5 to their human counterpartsQ72336928
Characterization of the adenylation site in the RNA 3'-terminal phosphate cyclase from Escherichia coliQ73212121
P433issue9
P407language of work or nameEnglishQ1860
P921main subjectRNA terminal phosphate cyclase-like 1Q21987478
RRNA-processing endoribonuclease YOL010WQ27547398
P304page(s)2115-26
P577publication date2000-05-02
P1433published inThe EMBO JournalQ1278554
P1476titleRcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis
P478volume19

Reverse relations

cites work (P2860)
Q24807153A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
Q27937306A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis
Q37192003A novel small-subunit processome assembly intermediate that contains the U3 snoRNP, nucleolin, RRP5, and DBP4.
Q39674963A physical interaction between Gar1p and Rnt1pi is required for the nuclear import of H/ACA small nucleolar RNA-associated proteins
Q40283480A rare missense variant in RCL1 segregates with depression in extended families
Q27933643An essential GTPase promotes assembly of preribosomal RNA processing complexes
Q35180630An overview of pre-ribosomal RNA processing in eukaryotes
Q34363643An unexpected, conserved element of the U3 snoRNA is required for Mpp10p association
Q38210936Assembly and nuclear export of pre-ribosomal particles in budding yeast
Q27935958Bms1p, a G-domain-containing protein, associates with Rcl1p and is required for 18S rRNA biogenesis in yeast.
Q27931503Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast
Q30673378Brix from xenopus laevis and brx1p from yeast define a new family of proteins involved in the biogenesis of large ribosomal subunits.
Q27935193Characterization of Saccharomyces cerevisiae Npa2p (Urb2p) reveals a low-molecular-mass complex containing Dbp6p, Npa1p (Urb1p), Nop8p, and Rsa3p involved in early steps of 60S ribosomal subunit biogenesis
Q39317738Comparison of preribosomal RNA processing pathways in yeast, plant and human cells - focus on coordinated action of endo- and exoribonucleases.
Q24619180Components of U3 snoRNA-containing Complexes Shuttle between Nuclei and the Cytoplasm and Differentially Localize in Nucleoli: Implications for Assembly and Function
Q27936383Composition and functional characterization of yeast 66S ribosome assembly intermediates.
Q27684829Crucial role of the Rcl1p-Bms1p interaction for yeast pre-ribosomal RNA processing
Q27667145Crystal structure of Rcl1, an essential component of the eukaryal pre-rRNA processosome implicated in 18s rRNA biogenesis
Q30301078DEAD-box RNA helicase Dbp4 is required for small-subunit processome formation and function
Q33112706Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation
Q27932355Dhr1p, a putative DEAH-box RNA helicase, is associated with the box C+D snoRNP U3.
Q27935682Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes.
Q27939988Esf2p, a U3-associated factor required for small-subunit processome assembly and compaction
Q24293339Evolutionarily conserved function of RRP36 in early cleavages of the pre-rRNA and production of the 40S ribosomal subunit
Q54349125GTP-dependent RNA 3'-terminal phosphate cyclase from the hyperthermophilic archaeon Pyrococcus furiosus.
Q46771169GTP-dependent formation of a ribonucleoprotein subcomplex required for ribosome biogenesis
Q59806899Generation of 2',3'-Cyclic Phosphate-Containing RNAs as a Hidden Layer of the Transcriptome
Q27934964Mrd1p is required for processing of pre-rRNA and for maintenance of steady-state levels of 40 S ribosomal subunits in yeast.
Q93000131Neutrophil GM-CSF signaling in inflammatory bowel disease patients is influenced by non-coding genetic variants
Q35613366Pol I transcription and pre-rRNA processing are coordinated in a transcription-dependent manner in mammalian cells
Q26853246Processing of preribosomal RNA in Saccharomyces cerevisiae
Q27937796Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturation
Q34575668RNA 3'-phosphate cyclase (RtcA) catalyzes ligase-like adenylylation of DNA and RNA 5'-monophosphate ends
Q27932054RRP20, a component of the 90S preribosome, is required for pre-18S rRNA processing in Saccharomyces cerevisiae
Q27935945Rcl1 protein, a novel nuclease for 18 S ribosomal RNA production
Q35567494Ribosomal RNA processing in Candida albicans.
Q29615231Ribosome assembly in eukaryotes
Q37269766Ribosome biogenesis in the yeast Saccharomyces cerevisiae
Q35133803Ribosome biogenesis: role of small nucleolar RNA in maturation of eukaryotic rRNA.
Q24561801Role of pre-rRNA base pairing and 80S complex formation in subnucleolar localization of the U3 snoRNP
Q34452050Rrp12 and the Exportin Crm1 participate in late assembly events in the nucleolus during 40S ribosomal subunit biogenesis
Q34546169Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.
Q37344501Structure-activity relationships in human RNA 3'-phosphate cyclase
Q42598512The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans
Q27939326The Shq1p.Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis
Q34154569The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in Vitro
Q27936348The helicase Has1p is required for snoRNA release from pre-rRNA.
Q24298425The human Imp3 and Imp4 proteins form a ternary complex with hMpp10, which only interacts with the U3 snoRNA in 60-80S ribonucleoprotein complexes
Q64063837The small and large ribosomal subunits depend on each other for stability and accumulation
Q34559435The small subunit processome in ribosome biogenesis—progress and prospects
Q33705481Traversing the RNA world
Q28504712Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis
Q27931813Utp25p, a nucleolar Saccharomyces cerevisiae protein, interacts with U3 snoRNP subunits and affects processing of the 35S pre-rRNA.
Q39460997Xenopus U3 snoRNA GAC-Box A' and Box A sequences play distinct functional roles in rRNA processing