Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics

scientific article

Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/bmcbi/ZeebergRKBULBW04
P6179Dimensions Publication ID1004455854
P356DOI10.1186/1471-2105-5-80
P3181OpenCitations bibliographic resource ID3937360
P932PMC publication ID459209
P698PubMed publication ID15214961
P5875ResearchGate publication ID8493191

P50authorKimberly J BusseyQ37828769
P2093author name stringJ Carl Barrett
W Marston Linehan
John N Weinstein
Barry R Zeeberg
Edward Uchio
David W Kane
Joseph Riss
P2860cites workMatchMiner: a tool for batch navigation among gene and gene product identifiersQ24796494
GoMiner: a resource for biological interpretation of genomic and proteomic dataQ24796534
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAsQ28131821
Computer-based methods for the mouse full-length cDNA encyclopedia: real-time sequence clustering for construction of a nonredundant cDNA library.Q30649625
Inhibition of PPAR gamma 2 gene expression by the HIF-1-regulated gene DEC1/Stra13: a mechanism for regulation of adipogenesis by hypoxiaQ42817965
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectMicrosoft ExcelQ11272
identifierQ853614
bioinformaticsQ128570
P304page(s)80
P577publication date2004-06-23
P1433published inBMC BioinformaticsQ4835939
P1476titleMistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics
P478volume5

Reverse relations

cites work (P2860)
Q24673513A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
Q28649822A software tool for the input and management of phenotypic data using personal digital assistants and other mobile devices
Q31146507A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.
Q59416415Analysis of published PKD1 gene sequence variants
Q91058656Annot: a Django-based sample, reagent, and experiment metadata tracking system
Q21267235Annotating the human genome with Disease Ontology
Q38518082Celecoxib treatment alters the gene expression profile of normal colonic mucosa
Q33472990CellMiner: a relational database and query tool for the NCI-60 cancer cell lines
Q24811392CoPub Mapper: mining MEDLINE based on search term co-publication
Q51923478Commentary: Never trust your word processor.
Q44761855Comprehensive Investigation of Parameter Choice in Viral Integration Site Analysis and Its Effects on the Gene Annotations Produced
Q56200060Data Organization in Spreadsheets
Q91874973Design and analysis of CRISPR-Cas experiments
Q36409026Designing Drug-Response Experiments and Quantifying their Results.
Q64228405Developing BIOTEL: A Semi-Automated Spreadsheet for Estimating Telomere Length and Biological Age
Q41864689Escape Excel: A tool for preventing gene symbol and accession conversion errors.
Q24812339FeatureExtract--extraction of sequence annotation made easy
Q26699971Gene name errors are widespread in the scientific literature
Q108127159Gene name errors: Lessons not learned
Q35630836GeneSigDB: a manually curated database and resource for analysis of gene expression signatures
Q112643917Genome-wide identification and analysis of prognostic features in human cancers
Q24799422GenomeViz: visualizing microbial genomes
Q33261257Goulphar: rapid access and expertise for standard two-color microarray normalization methods
Q58260466How to Share Data for Collaboration
Q91233941ISDB: a database toolkit for storing and analyzing viral integration site data
Q29048137Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
Q33037209Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
Q95688987Investigating Software Usage in the Social Sciences: A Knowledge Graph Approach
Q33366123Key issues in conducting a meta-analysis of gene expression microarray datasets
Q92231216Mammalian Annotation Database for improved annotation and functional classification of Omics datasets from less well-annotated organisms
Q38786237Meta-Analysis in Gene Expression Studies
Q89018154Methods of Analysis and Meta-Analysis for Identifying Differentially Expressed Genes
Q45007597Molecular interaction networks for the analysis of human disease: utility, limitations, and considerations.
Q34238131NanoStringNorm: an extensible R package for the pre-processing of NanoString mRNA and miRNA data
Q47616860NanoStringNormCNV: Pre-processing of NanoString CNV data
Q31082954Non-negligible Occurrence of Errors in Gender Description in Public Data Sets
Q36603854OntoMaton: a bioportal powered ontology widget for Google Spreadsheets
Q28240766PIQMIe: a web server for semi-quantitative proteomics data management and analysis
Q93339281QIIME 2 Enables Comprehensive End-to-End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data
Q64937044Quantifying murine placental extracellular vesicles across gestation and in preterm birth data with tidyNano: A computational framework for analyzing and visualizing nanoparticle data in R.
Q36238101Rampant software errors may undermine scientific results
Q112682191Reproducible manuscript preparation with RMarkdown application to JMSACL and other Elsevier Journals
Q53839275S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data.
Q106498418Sharing biological data: why, when, and how
Q114660237Stress and the brain transcriptome: Identifying commonalities and clusters in standardized data from published experiments
Q38703657System Level Meta-analysis of Microarray Datasets for Elucidation of Diabetes Mellitus Pathobiology
Q59789265Systematic identification of mutations and copy number alterations associated with cancer patient prognosis
Q47200762Ten simple rules for biologists learning to program
Q21184158Text-mining and information-retrieval services for molecular biology
Q24293871The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease
Q36317408Truke, a web tool to check for and handle excel misidentified gene symbols
Q37190539Using GenePattern for gene expression analysis
Q90028430What did we learn from multiple omics studies in asthma?
Q21203777nuID: a universal naming scheme of oligonucleotides for illumina, affymetrix, and other microarrays

Search more.