The prolyl isomerase domain of PpiD fromEscherichia colishows a parvulin fold but is devoid of catalytic activity

scientific article

The prolyl isomerase domain of PpiD fromEscherichia colishows a parvulin fold but is devoid of catalytic activity is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/PRO.277
P3181OpenCitations bibliographic resource ID4742643
P932PMC publication ID2817834
P698PubMed publication ID19866485
P5875ResearchGate publication ID38045016

P50authorUlrich WeiningerQ28050819
Jochen BalbachQ28050821
Roman P JakobQ58231292
Franz X. SchmidQ62056389
Michael KovermannQ90215544
P2860cites workNMR solution structure of hPar14 reveals similarity to the peptidyl prolyl cis/trans isomerase domain of the mitotic regulator hPin1 but indicates a different functionality of the proteinQ27626801
Solution structure of the single-domain prolyl cis/trans isomerase PIN1At from Arabidopsis thalianaQ27639234
Crystallographic structure of SurA, a molecular chaperone that facilitates folding of outer membrane porinsQ27639946
Structural analysis of the mitotic regulator hPin1 in solution: insights into domain architecture and substrate bindingQ27641101
The Periplasmic Bacterial Molecular Chaperone SurA Adapts its Structure to Bind Peptides in Different Conformations to Assert a Sequence Preference for Aromatic ResiduesQ27647943
Solution structure of the parvulin-type PPIase domain of Staphylococcus aureus PrsA – Implications for the catalytic mechanism of parvulinsQ27654271
NMR solution structure of SlyD from Escherichia coli: spatial separation of prolyl isomerase and chaperone functionQ27654594
The substrate-binding site in Escherichia coli cyclophilin A preferably recognizes a cis-proline isomer or a highly distorted form of the trans isomerQ27732612
Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependentQ27739821
Using NMRView to visualize and analyze the NMR spectra of macromoleculesQ27860567
AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMRQ27860778
NMRPipe: a multidimensional spectral processing system based on UNIX pipesQ27860859
MOLMOL: a program for display and analysis of macromolecular structuresQ27860873
Protein backbone angle restraints from searching a database for chemical shift and sequence homologyQ27861108
Determination of enzymatic catalysis for the cis-trans-isomerization of peptide binding in proline-containing peptidesQ28267643
The SurA periplasmic PPIase lacking its parvulin domains functions in vivo and has chaperone activityQ28354278
SlyD proteins from different species exhibit high prolyl isomerase and chaperone activitiesQ28485735
Primary structure effects on peptide group hydrogen exchangeQ29614750
Intrinsic dynamics of an enzyme underlies catalysisQ29616406
Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturantsQ29617228
ARIA: automated NOE assignment and NMR structure calculationQ29620311
Membrane protein folding on the example of outer membrane protein A of Escherichia coli.Q30164479
The CD4 determinant for downregulation by HIV-1 Nef directly binds to Nef. Mapping of the Nef binding surface by NMR.Q30176862
Insights into the catalytic mechanism of peptidyl prolyl cis/trans isomerasesQ30320453
The Escherichia coli SlyD is a metal ion-regulated peptidyl-prolyl cis/trans-isomerase.Q30321311
Stability of protein structure and hydrophobic interaction.Q30403599
A library of fluorescent peptides for exploring the substrate specificities of prolyl isomerasesQ33507146
Role of the Escherichia coli SurA protein in stationary-phase survival.Q33739792
A new heat-shock gene, ppiD, encodes a peptidyl-prolyl isomerase required for folding of outer membrane proteins in Escherichia coliQ33889129
Enzyme dynamics during catalysisQ34115429
Periplasmic peptidyl prolyl cis-trans isomerases are not essential for viability, but SurA is required for pilus biogenesis in Escherichia coliQ34124391
The structural basis of protein targeting and translocation in bacteria.Q34261907
SurA assists the folding of Escherichia coli outer membrane proteinsQ35604222
surA, an Escherichia coli gene essential for survival in stationary phaseQ36254871
Catalysis of protein folding by parvulinQ36889249
The disulfide bond formation (Dsb) systemQ37136271
Interaction of the periplasmic peptidylprolyl cis-trans isomerase SurA with model peptides. The N-terminal region of SurA id essential and sufficient for peptide bindingQ38297173
Genetic evidence for parallel pathways of chaperone activity in the periplasm of Escherichia coliQ39505348
Prolyl isomerase: enzymatic catalysis of slow protein-folding reactionsQ40488942
Mechanism of enzymatic and nonenzymatic prolyl cis-trans isomerization.Q40818804
Backbone and side-chain dynamics of residues in a partially folded beta-sheet peptide from platelet factor-4.Q42845736
Solution structure of Escherichia coli Par10: The prototypic member of the Parvulin family of peptidyl-prolyl cis/trans isomerases.Q43095107
High enzymatic activity and chaperone function are mechanistically related features of the dimeric E. coli peptidyl-prolyl-isomerase FkpA.Q43655302
Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: application to methionine residues in a cavity mutant of T4 lysozymeQ43677989
SurA, a periplasmic protein with peptidyl-prolyl isomerase activity, participates in the assembly of outer membrane porinsQ44025126
The periplasmic peptidyl prolyl cis-trans isomerases PpiD and SurA have partially overlapping substrate specificitiesQ44088884
Energetic coupling between native-state prolyl isomerization and conformational protein foldingQ44913453
Molecular determinants of a native-state prolyl isomerizationQ44984446
The dual histidine motif in the active site of Pin1 has a structural rather than catalytic roleQ46324112
Binding of phage-display-selected peptides to the periplasmic chaperone protein SurA mimics binding of unfolded outer membrane proteinsQ47344205
Confirmation of the existence of a third family among peptidyl-prolyl cis/trans isomerases. Amino acid sequence and recombinant production of parvulinQ48079055
Kinetic Analysis of Cyclophilin-Catalyzed Prolyl Cis/Trans Isomerization by Dynamic NMR SpectroscopyQ52326716
Stability and folding kinetics of ribonuclease T1 are strongly altered by the replacement of cis-proline 39 with alanine.Q53751977
The periplasmic chaperone PpiD interacts with secretory proteins exiting from the SecYEG translocon.Q54423305
Insertion of a chaperone domain converts FKBP12 into a powerful catalyst of protein folding.Q54444088
A novel peptidyl-prolyl cis/trans isomerase from Escherichia coli.Q54635381
Structural and functional characterization of Escherichia coli peptidyl-prolyl cis-trans isomerases.Q54677445
The periplasmic Escherichia coli peptidylprolyl cis,trans-isomerase FkpA. II. Isomerase-independent chaperone activity in vitroQ56896185
Folding mechanism of ribonuclease T1 in the absence of the disulfide bondsQ72858649
A TROSY CPMG sequence for characterizing chemical exchange in large proteinsQ73289769
The mode of action of peptidyl prolyl cis/trans isomerases in vivo: binding vs. catalysisQ74582891
The genetics of disulfide bond metabolismQ77936221
Periplasmic chaperones--new structural and functional insightsQ78507732
NMR solution structure and characterization of substrate binding site of the PPIase domain of PrsA protein from Bacillus subtilisQ82725784
P433issue1
P304page(s)6-18
P577publication date2010-01-01
P1433published inProtein ScienceQ7251445
P1476titleThe prolyl isomerase domain of PpiD fromEscherichia colishows a parvulin fold but is devoid of catalytic activity
P478volume19

Reverse relations

cites work (P2860)
Q39244663An overview on molecular chaperones enhancing solubility of expressed recombinant proteins with correct folding
Q35055492Dimeric Structure of the Bacterial Extracellular Foldase PrsA.
Q33985391Dynamic interaction of the sec translocon with the chaperone PpiD
Q35046397Functional analysis of the Listeria monocytogenes secretion chaperone PrsA2 and its multiple contributions to bacterial virulence
Q34297821Microbial peptidyl-prolyl cis/trans isomerases (PPIases): virulence factors and potential alternative drug targets
Q36062775NmPin from the marine thaumarchaeote Nitrosopumilus maritimus is an active membrane associated prolyl isomerase
Q30156004PpiD is a player in the network of periplasmic chaperones in Escherichia coli
Q38940176Protein folding in the cell envelope of Escherichia coli.
Q64119172Structural Analysis of the 42 kDa Parvulin of
Q47827642Structure-Function Analysis of the Periplasmic Escherichia coli Cyclophilin PpiA in Relation to Biofilm Formation.
Q30155481The Bam machine: a molecular cooper
Q37723502The Periplasmic Chaperone Network of Campylobacter jejuni: Evidence that SalC (Cj1289) and PpiD (Cj0694) Are Involved in Maintaining Outer Membrane Integrity
Q42145472The Remorin C-terminal Anchor was shaped by convergent evolution among membrane binding domains
Q35065149The virulence factor PEB4 (Cj0596) and the periplasmic protein Cj1289 are two structurally related SurA-like chaperones in the human pathogen Campylobacter jejuni

articles: null.

Warning: Trying to access array offset on value of type null in /home/httpd/vhosts/renenyffenegger.ch/opendata.renenyffenegger.ch/Wikimedia/Wikidata/entity/main.php on line 1120 Warning: Trying to access array offset on value of type null in /home/httpd/vhosts/renenyffenegger.ch/opendata.renenyffenegger.ch/Wikimedia/Wikidata/entity/main.php on line 1120

Warning: foreach() argument must be of type array|object, null given in /home/httpd/vhosts/renenyffenegger.ch/opendata.renenyffenegger.ch/Wikimedia/Wikidata/entity/main.php on line 1122

Search more.