| academic journal | Q737498 |
| open-access journal | Q773668 |
| scientific journal | Q5633421 |
| P6981 | ACNP journal ID | 3313766 |
| P8375 | Crossref journal ID | 287347 |
| P5115 | Directory of Open Access Journals ID | 2189-4779 |
| P8903 | HAL journal ID | 154998 |
| P236 | ISSN | 2189-4779 |
| P7363 | ISSN-L | 2189-4779 |
| P11504 | J-STAGE journal ID | biophysico |
| biophysico | ||
| P1055 | NLM Unique ID | 101675089 |
| P10283 | OpenAlex ID | V4210240732 |
| P12834 | PMC journal ID | 2913 |
| P7662 | Scilit journal ID | 2161225 |
| P972 | catalog | Directory of Open Access Journals | Q1227538 |
| P275 | copyright license | Creative Commons Attribution-NonCommercial-ShareAlike | Q6998997 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P17 | country | Japan | Q17 |
| P495 | country of origin | Japan | Q17 |
| P8875 | indexed in bibliographic review | Emerging Sources Citation Index | Q22908122 |
| P9901 | issuing agent of work | Biophysical Society of Japan | Q28683260 |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | biology | Q420 |
| P123 | publisher | Biophysical Society of Japan | Q28683260 |
| P1476 | title | Biophysics and physicobiology |
| Q92955106 | A collective motion description of tubulin βT7 loop dynamics |
| Q102068201 | A novel mode of interaction between intrinsically disordered proteins |
| Q90681969 | A novel role of oxytocin: Oxytocin-induced well-being in humans |
| Q101040127 | A simple method for modeling amyloid kinetics featuring position biased fiber breakage |
| Q92955245 | A tool written in Scala for preparation and analysis in MD simulation and 3D-RISM calculation of biomolecules |
| Q30396105 | A unified statistical model of protein multiple sequence alignment integrating direct coupling and insertions |
| Q91587070 | ATP effects on response of human erythrocyte membrane to high pressure |
| Q90681964 | Ab-initio study of pyrrole ring deformation in the indole group of 5-HT interacting with water molecules |
| Q42185263 | Accelerating in vitro studies on circadian clock systems using an automated sampling device |
| Q37616260 | Actin binding domain of filamin distinguishes posterior from anterior actin filaments in migrating Dictyostelium cells |
| Q92955115 | All Atom Motion Tree detects side chain-related motions and their coupling with domain motion in proteins |
| Q92955086 | Allosteric response to ligand binding: Molecular dynamics study of the N-terminal domains in IP 3 receptor |
| Q41227187 | Amino acid residues of bitter taste receptor TAS2R16 that determine sensitivity in primates to β-glycosides. |
| Q47557289 | Analysis of an ATP-induced conformational transition of ABC transporter MsbA using a coarse-grained model. |
| Q92955200 | Analysis of molecular dynamics simulations of 10-residue peptide, chignolin, using statistical mechanics: Relaxation mode analysis and three-dimensional reference interaction site model theory |
| Q49337876 | Analysis of the GTPase motif of FlhF in the control of the number and location of polar flagella in Vibrio alginolyticus. |
| Q42185283 | Analysis of water channels by molecular dynamics simulation of heterotetrameric sarcosine oxidase. |
| Q55012495 | Biological meaning of “habitable zone” in nucleotide composition space. |
| Q64099002 | Biophysics in oviduct: Planar cell polarity, cilia, epithelial fold and tube morphogenesis, egg dynamics |
| Q92955252 | Bohr equation and the lost allosteric Bohr effects in symmetry |
| Q92955138 | Building a macro-mixing dual-basin Gō model using the Multistate Bennett Acceptance Ratio |
| Q92955091 | Cancellation between auto- and mutual correlation contributions of protein/water dynamics in terahertz time-domain spectra |
| Q36531711 | Case study on the evolution of hetero-oligomer interfaces based on the differences in paralogous proteins |
| Q28069190 | Cation-limited kinetic model for microbial extracellular electron transport via an outer membrane cytochrome C complex |
| Q102068204 | Cell mechanosensing underlies homeostasis of multicellular systems |
| Q28074574 | Chaperonin GroEL uses asymmetric and symmetric reaction cycles in response to the concentration of non-native substrate proteins |
| Q92955207 | Characterization of X-ray diffraction intensity function from a biological molecule for single particle imaging |
| Q41018728 | Characterization of protein folding by a Φ-value calculation with a statistical-mechanical model |
| Q55364398 | Chemical curation to improve data accuracy: recent development of the 3DMET database. |
| Q49837131 | Chimeric microbial rhodopsins for optical activation of Gs-proteins. |
| Q57822347 | Chromatin as a nuclear spring |
| Q55278982 | Collective motion of rod-shaped self-propelled particles through collision. |
| Q92955186 | Combination of coarse-grained molecular dynamics simulations and small-angle X-ray scattering experiments |
| Q55417868 | Comparison of brain monoamine content in three populations of Lymnaea that correlates with taste-aversive learning ability. |
| Q45397573 | Computational and theoretical approaches for studies of a lipid recognition protein on biological membranes. |
| Q92955054 | Confirmation of the formation of salt bridges in the denatured state of CutA1 protein using molecular dynamics simulations |
| Q37296194 | Conformational shift in the closed state of GroEL induced by ATP-binding triggers a transition to the open state |
| Q92955132 | Consistency principle for protein design |
| Q39242034 | Cooperativity and modularity in protein folding |
| Q55436577 | Cross-kymography analysis to simultaneously quantify the function and morphology of the archaellum. |
| Q90980476 | Cryo-EM studies of the rotary H+-ATPase/synthase from Thermus thermophilus |
| Q101565361 | Crystalline chitin hydrolase is a burnt-bridge Brownian motor |
| Q91324245 | Crystallographic analysis of the overlapping dinucleosome as a novel chromatin unit |
| Q109525037 | Current status of structure-based drug repurposing against COVID-19 by targeting SARS-CoV-2 proteins |
| Q91324243 | Data analytic study of the homothermal maintenance mechanism of Skunk Cabbage: Capturing pre-equilibrium characteristics using extended poisson model |
| Q41339261 | Demonstration of correlative atomic force and transmission electron microscopy using actin cytoskeleton |
| Q28828467 | Density functional study of molecular interactions in secondary structures of proteins |
| Q92955194 | Detection of cave pockets in large molecules: Spaces into which internal probes can enter, but external probes from outside cannot |
| Q102068203 | Detection of singularity in immunity and cancer by novel imaging techniques |
| Q49887775 | Determination of diffusion coefficients in live cells using fluorescence recovery after photobleaching with wide-field fluorescence microscopy. |
| Q41227075 | Determination of locked interfaces in biomolecular complexes using Haptimol_RD. |
| Q41981387 | Domain-based biophysical characterization of the structural and thermal stability of FliG, an essential rotor component of the Na+-driven flagellar motor |
| Q39458536 | Domain-to-domain coupling in voltage-sensing phosphatase |
| Q64078762 | Dynamic analysis of ribosome by a movie made from many three-dimensional electron-microscopy density maps |
| Q61806751 | Dynamic and static analyses of glass-like properties of three-dimensional tissues |
| Q39125534 | Dynamic profile analysis to characterize dynamics-driven allosteric sites in enzymes |
| Q92955082 | Dynamic properties of oligomers that characterize low-frequency normal modes |
| Q64945899 | Earthworm individualities when facing a conflict between turn alternation and aversive learning. |
| Q96173197 | Editorial |
| Q101040125 | Effect of nuclear import receptors on liquid-liquid phase separation |
| Q55176863 | Effects of myosin inhibitors on the X-ray diffraction patterns of relaxed and calcium-activated rabbit skeletal muscle fibers. |
| Q41227096 | Effects of substrate conformational strain on binding kinetics of catalytic antibodies. |
| Q30396109 | Effects of the difference in similarity measures on the comparison of ligand-binding pockets using a reduced vector representation of pockets |
| Q92955059 | Energetics of cosolvent effect on peptide aggregation |
| Q36301575 | Enhanced mRNA-protein fusion efficiency of a single-domain antibody by selection of mRNA display with additional random sequences in the terminal translated regions |
| Q94008379 | Erratum |
| Q55252885 | Evidence for the hook supercoiling mechanism of the bacterial flagellum. |
| Q42149392 | Existence of two O-like intermediates in the photocycle of Acetabularia rhodopsin II, a light-driven proton pump from a marine alga |
| Q59131882 | Fluorescent nanodiamonds as a robust temperature sensor inside a single cell |
| Q92955042 | Food deprivation changes chemotaxis behavior in Caenorhabditis elegans |
| Q61811804 | Forced diffusion of water molecules through aquaporin-5 biomembrane; a molecular dynamics study |
| Q92955048 | Forewords to the special issue "Progress of theoretical and computational biophysics-in honor of Professor Nobuhiro Go's outstanding contribution on the occasion of his 80th birthday" |
| Q92955162 | Free energy profile for unwrapping outer superhelical turn of CENP-A nucleosome |
| Q64280641 | Functional significance of HCM mutants of tropomyosin, V95A and D175N, studied with motility assays |
| Q101565362 | Gate-keeper of ion transport-a highly conserved helix-3 tryptophan in a channelrhodopsin chimera, C1C2/ChRWR |
| Q64901262 | Gating modulation of the KCNQ1 channel by KCNE proteins studied by voltage-clamp fluorometry. |
| Q41227013 | Genetic analysis of revertants isolated from the rod-fragile fliF mutant of Salmonella |
| Q92955098 | Gō model revisited |
| Q41498793 | High-speed atomic force microscopy imaging of live mammalian cells |
| Q92955073 | How can we derive hydration water dynamics with incoherent neutron scattering and molecular dynamics simulation? |
| Q101576381 | Identification and mapping of central pair proteins by proteomic analysis |
| Q33738049 | Identification of aqueous access residues of the sodium half channel in transmembrane helix 5 of the Fo-a subunit of Propionigenium modestum ATP synthase |
| Q41227088 | Importance of consensus region of multiple-ligand templates in a virtual screening method |
| Q41227150 | In silico studies for the interaction of tumor necrosis factor-alpha (TNF-α) with different saponins from Vietnamese ginseng (Panax vietnamesis). |
| Q58794868 | Influence of various parameters in the replica-exchange molecular dynamics method: Number of replicas, replica-exchange frequency, and thermostat coupling time constant |
| Q102977413 | Information physics of living matters |
| Q59137322 | Inhibition of crude viper venom action by silver nanoparticles: A biophysical and biochemical study |
| Q102068202 | Integrated bio-metal science: New frontiers of bio-metal science opened with cutting-edge techniques |
| Q36531717 | Investigation of glycan evolution based on a comprehensive analysis of glycosyltransferases using phylogenetic profiling. |
| Q42038694 | Isn't there an inductance factor in the plasma membrane of nerves? |
| Q41018971 | Itinerary profiling to analyze a large number of protein-folding trajectories |
| Q42185248 | Kinetic characteristics of chimeric channelrhodopsins implicate the molecular identity involved in desensitization |
| Q112582943 | Limitations of the ABEGO-based backbone design: ambiguity between αα-corner and αα-hairpin |
| Q30391532 | Liquid-theory analogy of direct-coupling analysis of multiple-sequence alignment and its implications for protein structure prediction |
| Q55403585 | Magnetic structure of manganese cluster in photosystem II investigated by electron paramagnetic resonance. |
| Q37296199 | Mass spectrometric analysis of protein-ligand interactions. |
| Q57822316 | Mathematical approach to unpinning of spiral waves anchored to an obstacle with high-frequency pacing |
| Q37621507 | Mechanical properties of spindle poles are symmetrically balanced |
| Q92955110 | Mechanism of the light-driven proton pump of bacteriorhodopsin based on the consistency principle |
| Q37573046 | Memorial Issue for Professor Nobuhiko Saitô. |
| Q28074539 | Metabolic pathway reconstruction strategies for central metabolism and natural product biosynthesis |
| Q92955154 | Methodological improvements for the analysis of domain movements in large biomolecular complexes |
| Q28082711 | Microbial rhodopsins: wide distribution, rich diversity and great potential |
| Q61798892 | Millimeter-sized belt-like pattern formation of actin filaments in solution by interacting with surface myosin |
| Q41433849 | Model simulation of the SPOC wave in a bundle of striated myofibrils |
| Q42185245 | Model-based control of the temporal patterns of intracellular signaling in silico |
| Q41227055 | Molecular dynamics analysis to evaluate docking pose prediction |
| Q55441392 | Molecular dynamics simulation study on the structural instability of the most common cystic fibrosis-associated mutant ΔF508-CFTR. |
| Q92955238 | Molecular dynamics simulations and linear response theories jointly describe biphasic responses of myoglobin relaxation and reveal evolutionarily conserved frequent communicators |
| Q37296204 | Molecular mechanisms of substrate specificities of uridinecytidine kinase. |
| Q33790407 | Molecular properties of a DTD channelrhodopsin from Guillardia theta |
| Q41339252 | Monte Carlo simulation of a statistical mechanical model of multiple protein sequence alignment |
| Q92955125 | More efficient screening of protein-protein complex model structures for reducing the number of candidates |
| Q96173203 | Multidomain protein structure prediction using information about residues interacting on multimeric protein interfaces |
| Q57822413 | Mutational analysis of the conserved carboxylates of anion channelrhodopsin-2 (ACR2) expressed in and their roles in anion transport |
| Q92955221 | Mutational effects of Cys113 on structural dynamics of Pin1 |
| Q42185239 | Mutations in the SH1 helix alter the thermal properties of myosin II. |
| Q90931474 | My various thoughts on actin |
| Q104283242 | NeProc predicts binding segments in intrinsically disordered regions without learning binding region sequences |
| Q102977406 | New lipid membrane technologies for reconstitution, analysis, and utilization of 'living' membrane proteins |
| Q92955146 | Normal mode analysis and beyond |
| Q92955069 | Normal mode analysis calculation for a full-atom model with a smaller number of degrees of freedom for huge protein molecules |
| Q58717983 | Novel insight into an energy transduction mechanism of the bacterial flagellar type III protein export |
| Q46154060 | Obituary: Nobuhiko Saitô, a man who understood protein folding in his own way. |
| Q101040130 | Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy |
| Q92955213 | On the use of algebraic topology concepts to check the consistency of genome assembly |
| Q28075052 | Operating principles of rotary molecular motors: differences between F1 and V1 motors |
| Q92955180 | Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching |
| Q41863639 | Physicochemical origin of high correlation between thermal stability of a protein and its packing efficiency: a theoretical study for staphylococcal nuclease mutants |
| Q92955231 | Polymer brush in articular cartilage lubrication: Nanoscale modelling and simulation |
| Q96173207 | Potential energy landscape and thermodynamic transitions of coarse-grained protein models revealed by the multicanonical generalized hybrid Monte Carlo method |
| Q92955119 | Prediction of the secondary structure of short DNA aptamers |
| Q55196296 | Preface of Special Issue "Databases". |
| Q37296181 | Preface of Special Issue "Protein-Ligand Interactions". |
| Q37573052 | Professor Nobuhiko Saitô's contribution to statistical mechanics of biopolymers |
| Q92955168 | Protein structure predictions by enhanced conformational sampling methods |
| Q38919449 | Protein-protein interactions of mitochondrial-associated protein via bioluminescence resonance energy transfer. |
| Q49880934 | Quantitative analyses of the equilibria among DNA complexes of a blue-light-regulated bZIP module, Photozipper. |
| Q115659538 | Quantitative and kinetic single-molecule analysis of DNA unwinding by <i>Escherichia coli</i> UvrD helicase |
| Q49507277 | Radial stiffness characteristics of the overlap regions of sarcomeres in isolated skeletal myofibrils in pre-force generating state. |
| Q102977420 | Rapid differentiation of human dental pulp stem cells to neuron-like cells by high K+ stimulation |
| Q113341079 | Recent advances in single-molecule spectroscopy studies on light-harvesting processes in oxygenic photosynthesis |
| Q64280617 | Relationship between conformation shift and disease related variation sites in ATP-binding cassette transporter proteins |
| Q92955066 | Replica exchange molecular dynamics simulation study on the mechanism of desiccation-induced structuralization of an intrinsically disordered peptide as a model of LEA proteins |
| Q36531723 | Rotational motion of rhodamine 6G tethered to actin through oligo(ethylene glycol) linkers studied by frequency-domain fluorescence anisotropy |
| Q55080651 | SEVENS: a database for comprehensive GPCR genes obtained from genomes: -Update to 68 eukaryotes. |
| Q90980479 | Second harmonic generation polarization microscopy as a tool for protein structure analysis |
| Q55365189 | Single-molecular and ensemble-level oscillations of cyanobacterial circadian clock. |
| Q41047184 | Single-molecule fluorescence imaging of RalGDS on cell surfaces during signal transduction from Ras to Ral. |
| Q64280626 | Single-particle analysis of full-length human poly(ADP-ribose) polymerase 1 |
| Q92955101 | Snake cube puzzle and protein folding |
| Q42151811 | Specific interactions between alkali metal cations and the KcsA channel studied using ATR-FTIR spectroscopy |
| Q37296186 | Specificity of broad protein interaction surfaces for proteins with multiple binding partners |
| Q102068205 | Spectroscopic and structural characteristics of a dual-light sensor protein, PYP-phytochrome related protein |
| Q30401066 | Statistical mechanics of protein structural transitions: Insights from the island model |
| Q64109391 | Structural and functional properties of Grb2 SH2 dimer in CD28 binding |
| Q49837111 | Structural basis for the molecular interactions in DNA damage tolerances. |
| Q28828464 | Structural characterization of single nucleotide variants at ligand binding sites and enzyme active sites of human proteins |
| Q42185298 | Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. |
| Q49571579 | Structural differences in the bacterial flagellar motor among bacterial species. |
| Q41924649 | Structural role of two histidines in the (6-4) photolyase reaction |
| Q36531702 | Structures of the troponin core domain containing the cardiomyopathy-causing mutants studied by small-angle X-ray scattering |
| Q36531707 | Subattomole detection of adiponectin in urine by ultrasensitive ELISA coupled with thio-NAD cycling |
| Q41227026 | Switching of the positive feedback for RAS activation by a concerted function of SOS membrane association domains |
| Q64280632 | Synchrotron-radiation vacuum-ultraviolet circular dichroism spectroscopy in structural biology: an overview |
| Q101565360 | Synthetic tissue engineering: Programming multicellular self-organization by designing customized cell-cell communication |
| Q64100442 | Targeted delivery using membrane vesicles in prokaryotes |
| Q49767666 | The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study. |
| Q41997520 | The change of picrotoxin-induced epileptiform discharges to the beta oscillation by carbachol in rat hippocampal slices |
| Q42185303 | The molecular dynamics of crawling migration in microtubule-disrupted keratocytes. |
| Q41498724 | The use of a genetically encoded molecular crowding sensor in various biological phenomena. |
| Q41899080 | Theoretical analyses on a flipping mechanism of UV-induced DNA damage |
| Q55266575 | Theoretical framework for analyzing structural compliance properties of proteins. |
| Q102068206 | Theoretical insights into the DNA repair function of Arabidopsis thaliana cryptochrome-DASH |
| Q26991765 | Three-dimensional vertex model for simulating multicellular morphogenesis |
| Q36531727 | Time-resolved chemiluminescence of firefly luciferin generated by dissolving oxygen in deoxygenated dimethyl sulfoxide containing potassium tert-butoxide |
| Q61804704 | Uncovering dehydration in cytochrome refolding from urea- and guanidine hydrochloride-denatured unfolded state by high pressure spectroscopy |
| Q59137323 | Verification of the effect of the axon fluid as a highly dielectric medium in the high-speed conduction of action potentials using a novel axon equivalent circuit |
| Q41018891 | What parameters characterize "life"? |
| Q55407727 | iMusta4SLC: Database for the structural property and variations of solute carrier transporters. |
| Q102977429 | myPresto/omegagene 2020: a molecular dynamics simulation engine for virtual-system coupled sampling |
| Q37331354 | myPresto/omegagene: a GPU-accelerated molecular dynamics simulator tailored for enhanced conformational sampling methods with a non-Ewald electrostatic scheme |
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