review article | Q7318358 |
scholarly article | Q13442814 |
P2093 | author name string | Susumu Goto | |
Masaaki Kotera | |||
P2860 | cites work | KNApSAcK Family Databases: Integrated Metabolite-Plant Species Databases for Multifaceted Plant Research | Q20900558 |
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes | Q21284200 | ||
KNIME-CDK: Workflow-driven cheminformatics | Q21284307 | ||
HMDB 3.0--The Human Metabolome Database in 2013 | Q24595162 | ||
Integrative analysis of environmental sequences using MEGAN4 | Q24604814 | ||
Modular architecture of metabolic pathways revealed by conserved sequences of reactions | Q24632549 | ||
The use of gene clusters to infer functional coupling | Q24673189 | ||
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases | Q24800167 | ||
BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences | Q26865769 | ||
EC-BLAST: a tool to automatically search and compare enzyme reactions | Q27162921 | ||
High-throughput generation, optimization and analysis of genome-scale metabolic models | Q28291992 | ||
Automatic assignment of EC numbers | Q28472696 | ||
Assignment of EC numbers to enzymatic reactions with reaction difference fingerprints | Q28484647 | ||
Prediction of missing enzyme genes in a bacterial metabolic network. Reconstruction of the lysine-degradation pathway of Pseudomonas aeruginosa | Q28492567 | ||
Metabolite profiling for plant functional genomics | Q28540952 | ||
The University of Minnesota Pathway Prediction System: multi-level prediction and visualization | Q28743128 | ||
Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours | Q28974902 | ||
Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles | Q29039336 | ||
A combined algorithm for genome-wide prediction of protein function | Q29615998 | ||
Protein interaction maps for complete genomes based on gene fusion events | Q29616048 | ||
Natural products as sources of new drugs over the 30 years from 1981 to 2010 | Q29616640 | ||
KAAS: an automatic genome annotation and pathway reconstruction server | Q29617232 | ||
'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data | Q29784220 | ||
Profiling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry | Q30320528 | ||
SCOPEC: a database of protein catalytic domains. | Q30342317 | ||
Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes | Q30845116 | ||
Firefly luciferase is a bifunctional enzyme: ATP-dependent monooxygenase and a long chain fatty acyl-CoA synthetase | Q30912447 | ||
Suggestions for a more rational classification and nomenclature of enzymes. | Q48818551 | ||
Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks. | Q49079424 | ||
Knowledge-based expert systems for toxicity and metabolism prediction: DEREK, StAR and METEOR. | Q50124574 | ||
Similarity perception of reactions catalyzed by oxidoreductases and hydrolases using different classification methods. | Q51693333 | ||
META. 2. A dictionary model of mammalian xenobiotic metabolism. | Q52366197 | ||
Systematic Analysis of Enzyme-Catalyzed Reaction Patterns and Prediction of Microbial Biodegradation Pathways | Q57239742 | ||
Metabolomics for unknown plant metabolites | Q63640592 | ||
Stochastic generator of chemical structure. 3. Reaction network generation | Q64146417 | ||
Grapevine stilbene synthase cDNA only slightly differing from chalcone synthase cDNA is expressed in Escherichia coli into a catalytically active enzyme | Q68533422 | ||
Phytochemistry meets genome analysis, and beyond | Q73010068 | ||
Systematic Prediction of Orthologous Units of Genes in the Complete Genomes | Q73174382 | ||
Evolution of metabolisms: a new method for the comparison of metabolic pathways using genomics information | Q73229572 | ||
Metabolite profiling: from diagnostics to systems biology | Q80513306 | ||
Analysis of highly polar compounds of plant origin: combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry. | Q31036569 | ||
Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction | Q31163861 | ||
Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection | Q33206722 | ||
Exploring the diversity of complex metabolic networks. | Q33210262 | ||
Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm | Q33241529 | ||
Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry | Q33426025 | ||
PathPred: an enzyme-catalyzed metabolic pathway prediction server | Q33569917 | ||
Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach. | Q33760384 | ||
Is EC class predictable from reaction mechanism? | Q34244212 | ||
Quantitative Metabolome Analysis Using Capillary Electrophoresis Mass Spectrometry | Q34272743 | ||
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. | Q34500266 | ||
Pathway alignment: application to the comparative analysis of glycolytic enzymes | Q34505049 | ||
Evaluation method for the potential functionome harbored in the genome and metagenome. | Q34509507 | ||
An efficient algorithm for de novo predictions of biochemical pathways between chemical compounds | Q34530664 | ||
The future of metabolic phytochemistry: larger numbers of metabolites, higher resolution, greater understanding | Q34582551 | ||
KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics | Q35101829 | ||
Missing genes in metabolic pathways: a comparative genomics approach | Q35114448 | ||
BRENDA in 2015: exciting developments in its 25th year of existence | Q35253488 | ||
Updates in Rhea--a manually curated resource of biochemical reactions | Q35254873 | ||
A new network representation of the metabolism to detect chemical transformation modules | Q35843123 | ||
KEGG as a reference resource for gene and protein annotation | Q36434599 | ||
ExplorEnz: the primary source of the IUBMB enzyme list | Q37262706 | ||
Recent advances in reconstruction and applications of genome-scale metabolic models | Q37952940 | ||
Fifty-five years of enzyme classification: advances and difficulties. | Q38150504 | ||
Computational assignment of the EC numbers for genomic-scale analysis of enzymatic reactions | Q38418372 | ||
PIERO ontology for analysis of biochemical transformations: effective implementation of reaction information in the IUBMB enzyme list | Q38421057 | ||
Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments | Q38461960 | ||
Microbial secondary metabolites and their impacts on insect symbioses | Q39044262 | ||
Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs. | Q40045994 | ||
Predicting protein function by genomic context: quantitative evaluation and qualitative inferences | Q40414366 | ||
Supervised de novo reconstruction of metabolic pathways from metabolome-scale compound sets | Q41555681 | ||
E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs | Q41943743 | ||
GENIES: gene network inference engine based on supervised analysis | Q42233064 | ||
Using reaction mechanism to measure enzyme similarity. | Q42544552 | ||
Eliciting possible reaction equations and metabolic pathways involving orphan metabolites | Q44302036 | ||
Assignment of EC numbers to enzymatic reactions with MOLMAP reaction descriptors and random forests. | Q45963611 | ||
ECOH: an enzyme commission number predictor using mutual information and a support vector machine | Q47267835 | ||
Filling gaps in a metabolic network using expression information. | Q48533883 | ||
P433 | issue | 0 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | natural product | Q901227 |
P304 | page(s) | 195-205 | |
P577 | publication date | 2016-07-15 | |
P1433 | published in | Biophysics and physicobiology | Q27727159 |
P1476 | title | Metabolic pathway reconstruction strategies for central metabolism and natural product biosynthesis | |
P478 | volume | 13 |
Q52350929 | A review of computational tools for design and reconstruction of metabolic pathways. |
Q125446742 | Artificial Intelligence and Discovery of Microbial Natural Products |
Search more.