scholarly article | Q13442814 |
P50 | author | Jean Weissenbach | Q1685910 |
Peer Bork | Q7160367 | ||
Kiran R Patil | Q40201471 | ||
Jeroen Raes | Q50285889 | ||
Aleksej Zelezniak | Q61040413 | ||
Nadia Perchat | Q117248356 | ||
Marcel Salanoubat | Q30828682 | ||
P2093 | author name string | Alain Perret | |
Takuji Yamada | |||
Alison S. Waller | |||
P2860 | cites work | The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific | Q21092763 |
Environments that induce synthetic microbial ecosystems | Q21563487 | ||
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities | Q34568547 | ||
Function prediction and protein networks | Q35089385 | ||
Missing genes in metabolic pathways: a comparative genomics approach | Q35114448 | ||
Cell and molecular aspects of human intestinal biotin absorption | Q37105800 | ||
Protein promiscuity and its implications for biotechnology | Q37389046 | ||
C-terminal residues of mature human T-lymphotropic virus type 1 protease are critical for dimerization and catalytic activity | Q37424824 | ||
Asparagine transaminase from rat liver | Q39140528 | ||
Systematic identification of selective essential genes in Helicobacter pylori by genome prioritization and allelic replacement mutagenesis | Q39502474 | ||
The purification and properties of l-histidine-2-oxoglutarate aminotransferase from Pseudomonas testosteroni | Q40346010 | ||
Flux coupling analysis of genome-scale metabolic network reconstructions. | Q40497938 | ||
A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011. | Q40519259 | ||
Construction of consecutive deletions of the Escherichia coli chromosome | Q41820603 | ||
Predicting genes for orphan metabolic activities using phylogenetic profiles | Q43227038 | ||
Introduction of a (poly)histidine tag in L-lactate dehydrogenase produces a mixture of active and inactive molecules | Q43697883 | ||
Preparative synthesis of GDP-beta-L-fucose by recombinant enzymes from enterobacterial sources | Q74316923 | ||
Orphan enzymes? | Q81240322 | ||
SmashCommunity: a metagenomic annotation and analysis tool | Q24489693 | ||
Enterotypes of the human gut microbiome | Q24489818 | ||
A human gut microbial gene catalogue established by metagenomic sequencing | Q24618931 | ||
SMART 7: recent updates to the protein domain annotation resource | Q24622634 | ||
Metagenomic analysis of the human distal gut microbiome | Q24633486 | ||
The Pfam protein families database | Q24644670 | ||
KEGG for linking genomes to life and the environment | Q24650347 | ||
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes | Q24652180 | ||
STRING 7--recent developments in the integration and prediction of protein interactions | Q24675384 | ||
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases | Q24800167 | ||
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes | Q24817116 | ||
Environmental genome shotgun sequencing of the Sargasso Sea | Q27860605 | ||
The genetic landscape of a cell | Q28131628 | ||
An efficient algorithm for large-scale detection of protein families | Q28131838 | ||
Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels | Q28263425 | ||
High-throughput generation, optimization and analysis of genome-scale metabolic models | Q28291992 | ||
Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data | Q28306582 | ||
Applications of genome-scale metabolic reconstructions | Q29031028 | ||
Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles | Q29039336 | ||
Community structure and metabolism through reconstruction of microbial genomes from the environment | Q29547528 | ||
Protein interaction maps for complete genomes based on gene fusion events | Q29616048 | ||
Conservation of gene order: a fingerprint of proteins that physically interact | Q29616049 | ||
A new generation of homology search tools based on probabilistic inference | Q29616170 | ||
Quantitative assessment of protein function prediction from metagenomics shotgun sequences | Q30002368 | ||
Extraction of phylogenetic network modules from the metabolic network | Q33236257 | ||
Identifying metabolic enzymes with multiple types of association evidence | Q33237950 | ||
A survey of orphan enzyme activities | Q33290482 | ||
Phenotypic landscape of a bacterial cell | Q33780274 | ||
Identification of essential genes in C. jejuni genome highlights hyper-variable plasticity regions | Q34166330 | ||
Molecular basis for mycophenolic acid biosynthesis in Penicillium brevicompactum | Q34170364 | ||
Comparative analysis of regulatory patterns in bacterial genomes. | Q34314649 | ||
'Unknown' proteins and 'orphan' enzymes: the missing half of the engineering parts list--and how to find it | Q34497524 | ||
P921 | main subject | metagenomics | Q903778 |
P304 | page(s) | 581 | |
P577 | publication date | 2012-05-08 | |
P1433 | published in | Molecular Systems Biology | Q2261043 |
P1476 | title | Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours | |
P478 | volume | 8 |
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Q28551270 | Consistency Analysis of Genome-Scale Models of Bacterial Metabolism: A Metamodel Approach |
Q91763183 | Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. |
Q35608365 | DomSign: a top-down annotation pipeline to enlarge enzyme space in the protein universe |
Q35168343 | Finding sequences for over 270 orphan enzymes |
Q34889744 | Interactions in the microbiome: communities of organisms and communities of genes |
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Q33718633 | Merging metagenomics and geochemistry reveals environmental controls on biological diversity and evolution |
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