Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G

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Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/S0969-2126(97)00255-4
P698PubMed publication ID9309219

P2093author name stringD S Goodsell
M L Kopka
R E Dickerson
J W Lown
G W Han
T K Chiu
P2860cites workStructure and dynamics of distamycin A with d(CGCAAATTGGC):d(GCCAATTTGCG) at low drug:DNA ratiosQ46080191
Molecular recognition between oligopeptides and nucleic acids. Monocationic imidazole lexitropsins that display enhanced GC sequence dependent DNA binding.Q52868554
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Binding of an antitumor drug to DNA, Netropsin and C-G-C-G-A-A-T-T-BrC-G-C-GQ27728507
Crystal structures of B-form DNA-RNA chimers complexed with distamycinQ27729462
Binding of two distamycin A molecules in the minor groove of an alternating B–DNA duplexQ27729845
Refinement of netropsin bound to DNA: bias and feedback in electron density map interpretationQ27730075
Crystal structure of CATGGCCATG and its implications for A-tract bending modelsQ27732131
Structure of a dicationic monoimidazole lexitropsin bound to DNAQ27732207
How proteins recognize the TATA boxQ27733301
Crystallographic R factor refinement by molecular dynamicsQ27860942
Recognition of DNA by designed ligands at subnanomolar concentrationsQ28284127
Amino-aromatic interactions in proteinsQ28290046
Cyclic polyamides for recognition in the minor groove of DNAQ33840166
The molecular origin of DNA-drug specificity in netropsin and distamycinQ34048525
Structural characterization of a 2:1 distamycin A.d(CGCAAATTGGC) complex by two-dimensional NMR.Q34293750
Isohelical analysis of DNA groove-binding drugsQ35040808
Sequence specific molecular recognition by a monocationic lexitropsin of the decadeoxyribonucleotide d-[CATGGCCATG]2: structural and dynamic aspects deduced from high field 1H-NMR studiesQ35941994
Sequence-specific recognition of double helical nucleic acids by proteinsQ35987597
Estimation of the DNA sequence discriminatory ability of hairpin-linked lexitropsinsQ36153496
Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitroQ36718713
Antiparallel side-by-side dimeric motif for sequence-specific recognition in the minor groove of DNA by the designed peptide 1-methylimidazole-2-carboxamide netropsinQ37155684
DNA minor groove binding of cross-linked lexitropsins: experimental conditions required to observe the covalently linked WPPW (groove wall-peptide-peptide-groove wall) motifQ38296136
Design of a G.C-specific DNA minor groove-binding peptide.Q38303245
Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA.Q38310156
Binding affinities of synthetic peptides, pyridine-2-carboxamidonetropsin and 1-methylimidazole-2-carboxamidonetropsin, that form 2:1 complexes in the minor groove of double-helical DNA.Q38315041
GC base sequence recognition by oligo(imidazolecarboxamide) and C-terminus-modified analogues of distamycin deduced from circular dichroism, proton nuclear magnetic resonance, and methidiumpropylethylenediaminetetraacetate-iron(II) footprinting studQ38319897
Drug recognition of DNA. Proposal for GC minor groove specific ligands: vinylexinsQ38346422
Structural and dynamic aspects of the sequence specific binding of netropsin and its bis-imidazole analogue on the decadeoxyribonucleotide d-[CGCAATTGCG]2.Q38347865
Structural and dynamic aspects of binding of a prototype lexitropsin to the decadeoxyribonucleotide d(CGCAATTGCG)2 deduced from high-resolution 1H NMR StudiesQ38347950
Molecular recognition between oligopeptides and nucleic acids: novel imidazole-containing oligopeptides related to netropsin that exhibit altered DNA sequence specificityQ38350213
Extended hairpin polyamide motif for sequence-specific recognition in the minor groove of DNA.Q45217406
P433issue8
P304page(s)1033-46
P577publication date1997-08-15
P1433published inStructureQ15709970
P1476titleDefining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G
P478volume5

Reverse relations

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