scholarly article | Q13442814 |
P356 | DOI | 10.1016/S0969-2126(97)00255-4 |
P698 | PubMed publication ID | 9309219 |
P2093 | author name string | D S Goodsell | |
M L Kopka | |||
R E Dickerson | |||
J W Lown | |||
G W Han | |||
T K Chiu | |||
P2860 | cites work | Structure and dynamics of distamycin A with d(CGCAAATTGGC):d(GCCAATTTGCG) at low drug:DNA ratios | Q46080191 |
Molecular recognition between oligopeptides and nucleic acids. Monocationic imidazole lexitropsins that display enhanced GC sequence dependent DNA binding. | Q52868554 | ||
The nature of .pi.-.pi. interactions | Q56688510 | ||
A theoretical study of the sequence specificity in binding of lexitropsins to B-DNA | Q69854551 | ||
Electrostatics of Polymorphic DNA | Q70423418 | ||
Stereochemistry of nucleic acids and their constituents. X. Solid-state base-stacking patterns in nucleic acid constituents and polynucleotides | Q71760622 | ||
Crystallographic study of one turn of G/C-rich B-DNA | Q27700900 | ||
Binding of an antitumor drug to DNA, Netropsin and C-G-C-G-A-A-T-T-BrC-G-C-G | Q27728507 | ||
Crystal structures of B-form DNA-RNA chimers complexed with distamycin | Q27729462 | ||
Binding of two distamycin A molecules in the minor groove of an alternating B–DNA duplex | Q27729845 | ||
Refinement of netropsin bound to DNA: bias and feedback in electron density map interpretation | Q27730075 | ||
Crystal structure of CATGGCCATG and its implications for A-tract bending models | Q27732131 | ||
Structure of a dicationic monoimidazole lexitropsin bound to DNA | Q27732207 | ||
How proteins recognize the TATA box | Q27733301 | ||
Crystallographic R factor refinement by molecular dynamics | Q27860942 | ||
Recognition of DNA by designed ligands at subnanomolar concentrations | Q28284127 | ||
Amino-aromatic interactions in proteins | Q28290046 | ||
Cyclic polyamides for recognition in the minor groove of DNA | Q33840166 | ||
The molecular origin of DNA-drug specificity in netropsin and distamycin | Q34048525 | ||
Structural characterization of a 2:1 distamycin A.d(CGCAAATTGGC) complex by two-dimensional NMR. | Q34293750 | ||
Isohelical analysis of DNA groove-binding drugs | Q35040808 | ||
Sequence specific molecular recognition by a monocationic lexitropsin of the decadeoxyribonucleotide d-[CATGGCCATG]2: structural and dynamic aspects deduced from high field 1H-NMR studies | Q35941994 | ||
Sequence-specific recognition of double helical nucleic acids by proteins | Q35987597 | ||
Estimation of the DNA sequence discriminatory ability of hairpin-linked lexitropsins | Q36153496 | ||
Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro | Q36718713 | ||
Antiparallel side-by-side dimeric motif for sequence-specific recognition in the minor groove of DNA by the designed peptide 1-methylimidazole-2-carboxamide netropsin | Q37155684 | ||
DNA minor groove binding of cross-linked lexitropsins: experimental conditions required to observe the covalently linked WPPW (groove wall-peptide-peptide-groove wall) motif | Q38296136 | ||
Design of a G.C-specific DNA minor groove-binding peptide. | Q38303245 | ||
Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA. | Q38310156 | ||
Binding affinities of synthetic peptides, pyridine-2-carboxamidonetropsin and 1-methylimidazole-2-carboxamidonetropsin, that form 2:1 complexes in the minor groove of double-helical DNA. | Q38315041 | ||
GC base sequence recognition by oligo(imidazolecarboxamide) and C-terminus-modified analogues of distamycin deduced from circular dichroism, proton nuclear magnetic resonance, and methidiumpropylethylenediaminetetraacetate-iron(II) footprinting stud | Q38319897 | ||
Drug recognition of DNA. Proposal for GC minor groove specific ligands: vinylexins | Q38346422 | ||
Structural and dynamic aspects of the sequence specific binding of netropsin and its bis-imidazole analogue on the decadeoxyribonucleotide d-[CGCAATTGCG]2. | Q38347865 | ||
Structural and dynamic aspects of binding of a prototype lexitropsin to the decadeoxyribonucleotide d(CGCAATTGCG)2 deduced from high-resolution 1H NMR Studies | Q38347950 | ||
Molecular recognition between oligopeptides and nucleic acids: novel imidazole-containing oligopeptides related to netropsin that exhibit altered DNA sequence specificity | Q38350213 | ||
Extended hairpin polyamide motif for sequence-specific recognition in the minor groove of DNA. | Q45217406 | ||
P433 | issue | 8 | |
P304 | page(s) | 1033-46 | |
P577 | publication date | 1997-08-15 | |
P1433 | published in | Structure | Q15709970 |
P1476 | title | Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G | |
P478 | volume | 5 |
Q50043318 | A polyamide inhibits replication of vesicular stomatitis virus by targeting RNA in the nucleocapsid. |
Q31988423 | Alternative heterocycles for DNA recognition: an N-methylpyrazole/N-methylpyrrole pair specifies for A.T/T.A base pairs |
Q27619544 | Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscopy |
Q33433618 | Binding of Hoechst 33258 and its derivatives to DNA. |
Q38301211 | Binding of bis-linked netropsin derivatives in the parallel-stranded hairpin form to DNA. |
Q90501499 | Bound Compound, Interfacial Water, and Phenyl Ring Rotation Dynamics of a Compound in the DNA Minor Groove |
Q38313901 | Complex of the herpes simplex virus type 1 origin binding protein UL9 with DNA as a platform for the design of a new type of antiviral drugs |
Q47742690 | DNA Sequence Recognition of a Cross-Linked Polyamide: CD Studies, Footprinting and Effects on the Activity of DNA Gyrase |
Q27618724 | DNA minor groove recognition of a non-self-complementary AT-rich sequence by a tris-benzimidazole ligand |
Q27710492 | DNA polymorphism in crystals: three stable conformations for the decadeoxynucleotide d(GCATGCATGC) |
Q38330652 | DNA sequence recognition by bis-linked netropsin and distamycin derivatives |
Q33896589 | DNA sequence recognition in the minor groove by crosslinked polyamides: The effect of N-terminal head group and linker length on binding affinity and specificity |
Q46614984 | Design of stapled DNA-minor-groove-binding molecules with a mutable atom simulated annealing method |
Q44972883 | Dimeric and trimeric derivatives of the azinomycin B chromophore show enhanced DNA binding |
Q36158697 | Effects of anticancer drugs on transcription factor-DNA interactions. |
Q43484533 | Exploration of the binding of DNA binding ligands to Staphylococcal DNA through QM/MM docking and molecular dynamics simulation |
Q33181594 | Induced fit DNA recognition by a minor groove binding analogue of Hoechst 33258: fluctuations in DNA A tract structure investigated by NMR and molecular dynamics simulations |
Q34188922 | Knowledge-based elastic potentials for docking drugs or proteins with nucleic acids |
Q44941758 | Methionine sustituted polyamides are RNAse mimics that inhibit translation |
Q24791230 | Molecular recognition of DNA base pairs by the formamido/pyrrole and formamido/imidazole pairings in stacked polyamides |
Q43885485 | Occurrence of DNA sequences specifically recognized by drugs in human promoters |
Q45160163 | Oligonucleotide--minor groove binder 1:2 conjugates: side by side parallel minor groove binder motif in stabilization of DNA duplex |
Q40080506 | Polyamide curvature and DNA sequence selective recognition: use of 4-aminobenzamide to adjust curvature. |
Q38349510 | Progress in the design of DNA sequence-specific lexitropsins |
Q39535184 | Protein and drug interactions in the minor groove of DNA. |
Q38311112 | Quantitative and sequence-specific analysis of DNA-ligand interaction by means of fluorescent intercalator probes |
Q33558215 | Ranking ligand affinity for the DNA minor groove by experiment and simulation |
Q44071231 | Sequence selective recognition of DNA by hairpin conjugates of a racemic seco-cyclopropaneindoline-2-benzofurancarboxamide and polyamides |
Q38323011 | Sequence-specific interactions of minor groove binders with restriction fragments of cDNAs for H tau 40 protein and MAP kinase 2. A qualitative and quantitative footprinting study |
Q37139944 | Specific molecular recognition of mixed nucleic acid sequences: an aromatic dication that binds in the DNA minor groove as a dimer |
Q27748839 | Structural basis for G.C recognition in the DNA minor groove |
Q27639211 | Structure of a beta-alanine-linked polyamide bound to a full helical turn of purine tract DNA in the 1:1 motif |
Q33181108 | Synthesis of fluorescent microgonotropens (FMGTs) and their interactions with dsDNA. |
Q33784144 | Synthetic DNA minor groove-binding drugs |
Q61977660 | Terpyridineplatinum(II) Incorporation inN-Methylpyrrole-Based Polyamides by Solid Phase Techniques |
Q36471175 | The theoretical limits of DNA sequence discrimination by linked polyamides |
Q54428214 | Two highly conserved features of bacterial initiator tRNAs license them to pass through distinct checkpoints in translation initiation. |
Q51083951 | Validation of a computational docking methodology to identify the non-covalent binding site of ligands to DNA. |