Distinct classes of yeast promoters revealed by differential TAF recruitment

scientific article

Distinct classes of yeast promoters revealed by differential TAF recruitment is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1126/SCIENCE.288.5469.1242
P698PubMed publication ID10817999

P2093author name stringM R Green
X Y Li
S R Bhaumik
P433issue5469
P407language of work or nameEnglishQ1860
P921main subjectTATA-binding protein-associated factor TAF6 YGL112CQ27549236
Taf12p YDR145WQ27550348
Histone acetyltransferase YGR274CQ27551031
Taf10p YDR167WQ27551449
P304page(s)1242-4
P577publication date2000-05-19
P1433published inScienceQ192864
P1476titleDistinct classes of yeast promoters revealed by differential TAF recruitment
P478volume288

Reverse relations

cites work (P2860)
Q52111779A broad but restricted requirement for TAF-5 (human TAFII100) for embryonic transcription in Caenorhabditis elegans.
Q41957756A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces
Q34649355A conserved role for human Nup98 in altering chromatin structure and promoting epigenetic transcriptional memory
Q48017973A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae
Q36856058Activation of a T-box-Otx2-Gsc gene network independent of TBP and TBP-related factors
Q24540745Activator-independent functions of the yeast mediator sin4 complex in preinitiation complex formation and transcription reinitiation
Q43975761Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast
Q33314905Adr1 and Cat8 mediate coactivator recruitment and chromatin remodeling at glucose-regulated genes
Q27932320An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p
Q47068840An extensive requirement for transcription factor IID-specific TAF-1 in Caenorhabditis elegans embryonic transcription
Q58422648Assembly of a Mediator/TFIID/TFIIA Complex Bypasses the Need for an Activator
Q33713593Association of the Mediator complex with enhancers of active genes
Q40736935Autonomous function of the amino-terminal inhibitory domain of TAF1 in transcriptional regulation
Q37695539Changes in genomewide occupancy of core transcriptional regulators during heat stress
Q42502032Chromatin is permissive to TATA-binding protein (TBP)-mediated transcription initiation
Q28145475Control of gene expression through regulation of the TATA-binding protein
Q27930925Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome
Q40015630Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates
Q36759161Core promoter-specific gene regulation: TATA box selectivity and Initiator-dependent bi-directionality of serum response factor-activated transcription
Q27639666Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20)
Q35078268Developmental regulation of transcription by a tissue-specific TAF homolog
Q34025319Developmental specificity of recruitment of TBP to the TATA box of the human gamma-globin gene
Q27935667Different sensitivities of bromodomain factors 1 and 2 to histone H4 acetylation
Q27930390Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo
Q42839779Differential requirement of SAGA subunits for Mot1p and Taf1p recruitment in gene activation
Q37095433Direct TFIIA-TFIID protein contacts drive budding yeast ribosomal protein gene transcription
Q33832637Direct transactivator-transcription factor IID (TFIID) contacts drive yeast ribosomal protein gene transcription
Q43125554Dissection of coactivator requirement at RNR3 reveals unexpected contributions from TFIID and SAGA.
Q27936344Distinct mutations in yeast TAF(II)25 differentially affect the composition of TFIID and SAGA complexes as well as global gene expression patterns.
Q34478777Distinct regulatory mechanisms of eukaryotic transcriptional activation by SAGA and TFIID
Q39645792Distinct requirements for C.elegans TAF(II)s in early embryonic transcription
Q40337797Dominant role for signal transduction in the transcriptional memory of yeast GAL genes
Q35917477Eaf1p Is Required for Recruitment of NuA4 in Targeting TFIID to the Promoters of the Ribosomal Protein Genes for Transcriptional Initiation In Vivo
Q33335325Ectopic expression of TATA box-binding protein induces shoot proliferation in Arabidopsis
Q45983312Eukaryotic transcription: the core of eukaryotic gene activation.
Q30700508Evidence that TAF-TATA box-binding protein interactions are required for activated transcription in mammalian cells
Q27937901Evidence that the elongation factor TFIIS plays a role in transcription initiation at GAL1 in Saccharomyces cerevisiae
Q27934996Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo
Q27937030Fluorescence-based analyses of the effects of full-length recombinant TAF130p on the interaction of TATA box-binding protein with TATA box DNA.
Q35004993Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock
Q42685039Functional analysis of H2B-Lys-123 ubiquitination in regulation of H3-Lys-4 methylation and recruitment of RNA polymerase II at the coding sequences of several active genes in vivo
Q34432893Gene-selective developmental roles of general transcription factors
Q39843802Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters
Q37732547Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes
Q43240899Genome-wide relationships between TAF1 and histone acetyltransferases in Saccharomyces cerevisiae
Q24797317HIV-1 Tat stimulates transcription complex assembly through recruitment of TBP in the absence of TAFs
Q33967804Heterozygous disruption of the TATA-binding protein gene in DT40 cells causes reduced cdc25B phosphatase expression and delayed mitosis.
Q27936250High-affinity DNA binding by a Mot1p-TBP complex: implications for TAF-independent transcription
Q41954712Highly redundant function of multiple AT-rich sequences as core promoter elements in the TATA-less RPS5 promoter of Saccharomyces cerevisiae
Q34190567Histone acetylases--versatile players
Q24291710Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo
Q35661538Human mediator enhances activator-facilitated recruitment of RNA polymerase II and promoter recognition by TATA-binding protein (TBP) independently of TBP-associated factors
Q47987647Identification and distinct regulation of yeast TATA box-containing genes
Q44562084Identification of a novel TATA element-binding protein binding region at the N terminus of the Saccharomyces cerevisiae TAF1 protein
Q51004498Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant.
Q27935003In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer
Q28207045Independent recruitment in vivo by Gal4 of two complexes required for transcription
Q75231689Interaction of Gal4p with components of transcription machinery in vivo
Q27939381Interdependent recruitment of SAGA and Srb mediator by transcriptional activator Gcn4p
Q90391244Kin28 depletionincreases association of TFIID subunits Taf1 and Taf4 with promoters in Saccharomyces cerevisiae
Q33713693Mapping and functional characterization of the TAF11 interaction with TFIIA.
Q64230205Mechanisms of Antisense Transcription Initiation with Implications in Gene Expression, Genomic Integrity and Disease Pathogenesis
Q37122772Mechanisms of antisense transcription initiation from the 3' end of the GAL10 coding sequence in vivo
Q47644109Mechanistic Differences in Transcription Initiation at TATA-Less and TATA-Containing Promoters
Q27934831Molecular characterization of Saccharomyces cerevisiae TFIID.
Q34286865Mot1 associates with transcriptionally active promoters and inhibits association of NC2 in Saccharomyces cerevisiae
Q27939600Mot1-mediated control of transcription complex assembly and activity
Q38362422Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation
Q22122454Multi-protein complexes in eukaryotic gene transcription
Q47673298Multiple Taf subunits of TFIID interact with Ino2 activation domains and contribute to expression of genes required for yeast phospholipid biosynthesis.
Q42494682Mutations in the TATA-binding protein, affecting transcriptional activation, show synthetic lethality with the TAF145 gene lacking the TAF N-terminal domain in Saccharomyces cerevisiae
Q27932095Mutations in the histone fold domain of the TAF12 gene show synthetic lethality with the TAF1 gene lacking the TAF N-terminal domain (TAND) by different mechanisms from those in the SPT15 gene encoding the TATA box-binding protein (TBP)
Q42796601Mutations on the DNA binding surface of TBP discriminate between yeast TATA and TATA-less gene transcription.
Q36374700Non-canonical TAF complexes regulate active promoters in human embryonic stem cells
Q45007503On the mechanism of constitutive Pdr1 activator-mediated PDR5 transcription in Saccharomyces cerevisiae: evidence for enhanced recruitment of coactivators and altered nucleosome structures
Q36332929Preferential repair of DNA double-strand break at the active gene in vivo
Q27930749Protein-protein interaction map for yeast TFIID.
Q27931371Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry
Q40406028Quantitative sequential chromatin immunoprecipitation, a method for analyzing co-occupancy of proteins at genomic regions in vivo
Q34011585Region of yeast TAF 130 required for TFIID to associate with promoters
Q36736199Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors
Q61809022Requirements for RNA polymerase II preinitiation complex formation in vivo
Q78482031Responses of four yeast genes to changes in the transcriptional machinery are determined by their promoters
Q35558697Roles for BTAF1 and Mot1p in dynamics of TATA-binding protein and regulation of RNA polymerase II transcription
Q28345347SAGA is an essential in vivo target of the yeast acidic activator Gal4p
Q27934681SAGA-associated Sgf73p facilitates formation of the preinitiation complex assembly at the promoters either in a HAT-dependent or independent manner in vivo
Q42861193SWI/SNF is required for transcriptional memory at the yeast GAL gene cluster
Q74604712Selective recruitment of TAFs by yeast upstream activating sequences. Implications for eukaryotic promoter structure
Q41999510Sequential Recruitment of SAGA and TFIID in a Genomic Response to DNA Damage in Saccharomyces cerevisiae
Q27935555Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo
Q43247301Site-specific cross-linking of TBP in vivo and in vitro reveals a direct functional interaction with the SAGA subunit Spt3.
Q39745923Structural and functional analysis of mutations along the crystallographic dimer interface of the yeast TATA binding protein
Q35669885Structure and function of the TFIID complex
Q35758805Structure and mechanism of the RNA polymerase II transcription machinery
Q27939428Systematic analysis of essential yeast TAFs in genome-wide transcription and preinitiation complex assembly
Q52162403TAC, a TBP-sans-TAFs complex containing the unprocessed TFIIAalphabeta precursor and the TFIIAgamma subunit
Q40791931TATA-binding protein-associated factors enhance the recruitment of RNA polymerase II by transcriptional activators
Q33967253TFIIA interacts with TFIID via association with TATA-binding protein and TAF40
Q39752283TFIIB-facilitated recruitment of preinitiation complexes by a TAF-independent mechanism
Q24674080TFIID and human mediator coactivator complexes assemble cooperatively on promoter DNA
Q64978684TOR Facilitates the Targeting of the 19S Proteasome Subcomplex To Enhance Transcription Complex Assembly at the Promoters of the Ribosomal Protein Genes.
Q27938515Targeted histone acetylation at the yeast CUP1 promoter requires the transcriptional activator, the TATA boxes, and the putative histone acetylase encoded by SPT10.
Q29555842Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
Q27929848The 19 s proteasome subcomplex establishes a specific protein interaction network at the promoter for stimulated transcriptional initiation in vivo
Q35823742The 19S proteasome subcomplex promotes the targeting of NuA4 HAT to the promoters of ribosomal protein genes to facilitate the recruitment of TFIID for transcriptional initiation in vivo
Q42380607The C Terminus of the RNA Polymerase II Transcription Factor IID (TFIID) Subunit Taf2 Mediates Stable Association of Subunit Taf14 into the Yeast TFIID Complex
Q37057264The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo
Q35805519The NC2 alpha and beta subunits play different roles in vivo
Q27940298The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.
Q27937037The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription
Q27935406The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.
Q91658425The TAFs of TFIID Bind and Rearrange the Topology of the TATA-Less RPS5 Promoter
Q38288193The TBP-inhibitory domain of TAF145 limits the effects of nonclassical transcriptional activators
Q34723440The mRNA cap-binding complex stimulates the formation of pre-initiation complex at the promoter via its interaction with Mot1p in vivo
Q24681624The new core promoter element XCPE1 (X Core Promoter Element 1) directs activator-, mediator-, and TATA-binding protein-dependent but TFIID-independent RNA polymerase II transcription from TATA-less promoters
Q59591382The study of macromolecular complexes by quantitative proteomics
Q27939855The transcriptional repressor activator protein Rap1p is a direct regulator of TATA-binding protein
Q34952743Transcription activation: unveiling the essential nature of TFIID.
Q34183825Transcription and chromatin converge: lessons from yeast genetics.
Q47790162Transcription of Nearly All Yeast RNA Polymerase II-Transcribed Genes Is Dependent on Transcription Factor TFIID.
Q28199910Transcriptional coactivator, CIITA, is an acetyltransferase that bypasses a promoter requirement for TAF(II)250
Q35542072Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.
Q49988874Two Distinct Regulatory Mechanisms of Transcriptional Initiation in Response to Nutrient Signaling
Q33425417Two modes of transcriptional activation at native promoters by NF-kappaB p65
Q92490294Two roles for the yeast transcription coactivator SAGA and a set of genes redundantly regulated by TFIID and SAGA
Q42222766Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo
Q27929763Use of a genetically introduced cross-linker to identify interaction sites of acidic activators within native transcription factor IID and SAGA.
Q33967909Yeast NC2 associates with the RNA polymerase II preinitiation complex and selectively affects transcription in vivo
Q27938360Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction
Q39918361p300 is involved in formation of the TBP-TFIIA-containing basal transcription complex, TAC.

Search more.