The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

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The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation. is …
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scholarly articleQ13442814

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P356DOI10.1128/MCB.01060-13
P932PMC publication ID3993605
P698PubMed publication ID24550006

P50authorRana P. SinghQ39274526
P2093author name stringKrishnamurthy Natarajan
Ishani Sinha
Rahul Siddharthan
Anushikha Thakur
Sonal Sawhney
Malika Saint
Rashmi Dahiya
P2860cites workSelective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4Q24294553
In vivo functional analysis of the histone 3-like TAF9 and a TAF9-related factor, TAF9LQ24306731
Distinct modes of gene regulation by a cell-specific transcriptional activatorQ24316297
Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase IIQ24320008
Core promoter binding by histone-like TAF complexesQ24322695
TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts alleleQ24545962
Significance analysis of microarrays applied to the ionizing radiation responseQ24606608
Activator Gcn4 employs multiple segments of Med15/Gal11, including the KIX domain, to recruit mediator to target genes in vivoQ24646051
A multiplicity of coactivators is required by Gcn4p at individual promoters in vivoQ24684851
Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatmentsQ24803156
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Structure and function of a human TAFII250 double bromodomain moduleQ27622657
The Acidic Transcription Activator Gcn4 Binds the Mediator Subunit Gal11/Med15 Using a Simple Protein Interface Forming a Fuzzy ComplexQ27676397
TFIID TAF6-TAF9 Complex Formation Involves the HEAT Repeat-containing C-terminal Domain of TAF6 and Is Modulated by TAF5 ProteinQ27681162
Structural similarity between TAFs and the heterotetrameric core of the histone octamerQ27732598
A new mathematical model for relative quantification in real-time RT-PCRQ27860781
Transcriptional regulatory networks in Saccharomyces cerevisiaeQ27860846
Use of a genetically introduced cross-linker to identify interaction sites of acidic activators within native transcription factor IID and SAGA.Q27929763
The histone H3-like TAF is broadly required for transcription in yeastQ27930236
Distinct classes of yeast promoters revealed by differential TAF recruitmentQ27931136
Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometryQ27931371
An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4pQ27932320
A protein complex of translational regulators of GCN4 mRNA is the guanine nucleotide-exchange factor for translation initiation factor 2 in yeastQ27933536
Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunitQ27933602
Transcriptional regulatory code of a eukaryotic genomeQ27933887
Isolation and characterization of TAF25, an essential yeast gene that encodes an RNA polymerase II-specific TATA-binding protein-associated factorQ27935508
Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivoQ27935555
Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediatorQ27936339
A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulationQ27936635
Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interactionQ27938360
A yeast taf17 mutant requires the Swi6 transcriptional activator for viability and shows defects in cell cycle-regulated transcriptionQ27938450
A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4pQ27938961
Interdependent recruitment of SAGA and Srb mediator by transcriptional activator Gcn4pQ27939381
Systematic analysis of essential yeast TAFs in genome-wide transcription and preinitiation complex assemblyQ27939428
TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo.Q27939707
SAGA is an essential in vivo target of the yeast acidic activator Gal4pQ28345347
Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol methodQ29547550
Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeastQ29614487
Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzymeQ29614681
Progression through the RNA polymerase II CTD cycleQ29614782
Preparation of high molecular weight RNAQ29614859
Histone acetyltransferase complexes: one size doesn't fit allQ29620006
The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complexQ33772811
Gcn4p, a master regulator of gene expression, is controlled at multiple levels by diverse signals of starvation and stressQ33905702
Genome-wide structure and organization of eukaryotic pre-initiation complexesQ34248195
The general transcription machinery and general cofactorsQ34549899
Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shockQ35004993
Interaction between the N-terminal domain of the 230-kDa subunit and the TATA box-binding subunit of TFIID negatively regulates TATA-box bindingQ35180776
The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of DrosophilaQ35196382
Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.Q35542072
H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activationQ36657584
Transcriptional activation in an improved whole-cell extract from Saccharomyces cerevisiaeQ36731857
How eukaryotic genes are transcribedQ37514183
Insights into SAGA function during gene expressionQ37553936
A synthetic HIS4 regulatory element confers general amino acid control on the cytochrome c gene (CYC1) of yeastQ37675227
Changes in genomewide occupancy of core transcriptional regulators during heat stressQ37695539
ATAC-king the complexity of SAGA during evolutionQ37994551
Redundant roles for the TFIID and SAGA complexes in global transcriptionQ38311191
Structural and functional analysis of yeast putative adaptors. Evidence for an adaptor complex in vivoQ38361167
Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promotersQ39843802
Autonomous function of the amino-terminal inhibitory domain of TAF1 in transcriptional regulationQ40736935
A comprehensive genomic binding map of gene and chromatin regulatory proteins in SaccharomycesQ41957756
Sequential Recruitment of SAGA and TFIID in a Genomic Response to DNA Damage in Saccharomyces cerevisiaeQ41999510
Domains of Tra1 important for activator recruitment and transcription coactivator functions of SAGA and NuA4 complexes.Q42141775
Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivoQ42492288
Dissection of coactivator requirement at RNR3 reveals unexpected contributions from TFIID and SAGA.Q43125554
Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeastQ43975761
Screening the yeast "disruptome" for mutants affecting resistance to the immunosuppressive drug, mycophenolic acidQ43997248
Structural insight into the recognition of the H3K4me3 mark by the TFIID subunit TAF3.Q46444527
A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiaeQ48017973
A movie of RNA polymerase II transcriptionQ48424870
Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions.Q53577981
H2B Ubiquitylation Acts as a Barrier to Ctk1 Nucleosomal Recruitment Prior to Removal by Ubp8 within a SAGA-Related ComplexQ54998786
Histone-like TAFs are essential for transcription in vivoQ77652527
yTAFII61 has a general role in RNA polymerase II transcription and is required by Gcn4p to recruit the SAGA coactivator complexQ77652532
P433issue9
P407language of work or nameEnglishQ1860
P921main subjectcell biologyQ7141
Histone acetyltransferase TRA1 YHR099WQ27547700
SAGA histone acetyltransferase complex subunit SPT7 YBR081CQ27552944
P304page(s)1547-1563
P577publication date2014-02-18
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleThe TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation
P478volume34