The role of the putative 3' end processing endonuclease Ysh1p in mRNA and snoRNA synthesis

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The role of the putative 3' end processing endonuclease Ysh1p in mRNA and snoRNA synthesis is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1261/RNA.1293008
P932PMC publication ID2590971
P698PubMed publication ID18971324
P5875ResearchGate publication ID23438949

P2093author name stringWalter Keller
Bernhard Dichtl
Monika Garas
P2860cites workThe yin and yang of the exosomeQ24292314
An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineriesQ24306150
Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sitesQ24317135
Sequence similarity between the 73-kilodalton protein of mammalian CPSF and a subunit of yeast polyadenylation factor IQ24321710
Functions of the exosome in rRNA, snoRNA and snRNA synthesisQ24529845
Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription terminationQ24534246
Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP familyQ24538351
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAsQ24554352
The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage siteQ24595513
The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription terminationQ24671920
cis- and trans-Acting determinants of transcription termination by yeast RNA polymerase IIQ27930796
A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase IIQ27930899
Functions for S. cerevisiae Swd2p in 3' end formation of specific mRNAs and snoRNAs and global histone 3 lysine 4 methylationQ27930951
CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.Q27931964
Evidence that polyadenylation factor CPSF-73 is the mRNA 3' processing endonuclease.Q27932064
The FIP1 gene encodes a component of a yeast pre-mRNA polyadenylation factor that directly interacts with poly(A) polymeraseQ27932571
Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription terminationQ27933119
Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-endsQ27933144
Cold-sensitive cell-division-cycle mutants of yeast: isolation, properties, and pseudoreversion studiesQ27933932
The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.Q27934493
A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formationQ27934649
A multisubunit 3' end processing factor from yeast containing poly(A) polymerase and homologues of the subunits of mammalian cleavage and polyadenylation specificity factorQ27935985
The WD-repeat protein pfs2p bridges two essential factors within the yeast pre-mRNA 3'-end-processing complexQ27936005
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcriptsQ27936766
A role for SSU72 in balancing RNA polymerase II transcription elongation and terminationQ27937178
Effects of mutations in the Saccharomyces cerevisiae RNA14, RNA15, and PAP1 genes on polyadenylation in vivoQ27937493
Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturationQ27937796
Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeastQ27937970
Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicaseQ27938434
Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II associationQ27939166
Ssu72 protein mediates both poly(A)-coupled and poly(A)-independent termination of RNA polymerase II transcriptionQ27939641
A link between secretion and pre-mRNA processing defects in Saccharomyces cerevisiae and the identification of a novel splicing gene, RSE1Q27939993
The yeast SEN1 gene is required for the processing of diverse RNA classesQ27940275
Elevated recombination rates in transcriptionally active DNAQ28131616
Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288CQ28131625
Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonucleaseQ28275724
Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesisQ28609911
Integrating mRNA processing with transcriptionQ28610124
The essential WD repeat protein Swd2 has dual functions in RNA polymerase II transcription termination and lysine 4 methylation of histone H3Q28776149
An evolutionary classification of the metallo-beta-lactamase fold proteins.Q30692408
Control of cleavage site selection during mRNA 3' end formation by a yeast hnRNP.Q33890209
Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNAQ33937656
Identification of novel genes required for yeast pre-mRNA splicing by means of cold-sensitive mutationsQ33967514
Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation.Q34302582
Expansion of the zinc metallo-hydrolase family of the beta-lactamase foldQ34341856
A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin geneQ34369553
A ribonucleolytic rat torpedoes RNA polymerase II.Q34379864
The role of the Brr5/Ysh1 C-terminal domain and its homolog Syc1 in mRNA 3'-end processing in Saccharomyces cerevisiaeQ34411087
Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factorsQ34419716
The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo modelQ34511126
Terminating the transcript: breaking up is hard to do.Q34520033
The role of the yeast cleavage and polyadenylation factor subunit Ydh1p/Cft2p in pre-mRNA 3'-end formationQ35186139
New perspectives on connecting messenger RNA 3' end formation to transcriptionQ35774183
Connections between mRNA 3' end processing and transcription terminationQ36131487
Molecular dissection of mammalian RNA polymerase II transcriptional terminationQ36528493
Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatusQ38306636
Distinct pathways for snoRNA and mRNA terminationQ38306697
Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.Q38330838
The nuclear exosome contributes to autogenous control of NAB2 mRNA levelsQ41098311
Regulation of a eukaryotic gene by GTP-dependent start site selection and transcription attenuation.Q43411001
The poly(A) signal, without the assistance of any downstream element, directs RNA polymerase II to pause in vivo and then to release stochastically from the templateQ46370210
Pcf11 is a termination factor in Drosophila that dismantles the elongation complex by bridging the CTD of RNA polymerase II to the nascent transcriptQ46875108
The Glc7 phosphatase subunit of the cleavage and polyadenylation factor is essential for transcription termination on snoRNA genes.Q47068298
Essential yeast protein with unexpected similarity to subunits of mammalian cleavage and polyadenylation specificity factor (CPSF).Q48057591
Coupling termination of transcription to messenger RNA maturation in yeast.Q52529973
Derailing the locomotive: transcription termination.Q53557863
Direct interactions between subunits of CPSF and the U2 snRNP contribute to the coupling of pre-mRNA 3' end processing and splicing.Q53610010
A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase IIQ69827439
RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factorQ72886747
Molecular biology. Knives, accomplices, and RNAQ81023642
Regulation of yeast NRD1 expression by premature transcription terminationQ82684606
P433issue12
P407language of work or nameEnglishQ1860
P921main subjectCleavage polyadenylation factor subunit YSH1 YLR277CQ27551287
P304page(s)2671-84
P577publication date2008-12-01
P1433published inRNAQ7277164
P1476titleThe role of the putative 3' end processing endonuclease Ysh1p in mRNA and snoRNA synthesis
P478volume14

Reverse relations

cites work (P2860)
Q42623262A Defective mRNA Cleavage and Polyadenylation Complex Facilitates Expansions of Transcribed (GAA)n Repeats Associated with Friedreich's Ataxia
Q34220974A quantitative, high-throughput reverse genetic screen reveals novel connections between Pre-mRNA splicing and 5' and 3' end transcript determinants
Q42158121A unified model for yeast transcript definition
Q37940429An active role for splicing in 3'-end formation
Q37168982Cordycepin interferes with 3' end formation in yeast independently of its potential to terminate RNA chain elongation
Q42145758DNA damage induces targeted, genome-wide variation of poly(A) sites in budding yeast
Q33480938Distinct roles of non-canonical poly(A) polymerases in RNA metabolism
Q89866675FttA is a CPSF73 homologue that terminates transcription in Archaea
Q37776952Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism
Q39790766Pcf11 orchestrates transcription termination pathways in yeast
Q64950575The APT complex is involved in non-coding RNA transcription and is distinct from CPF.
Q34117256The P-loop domain of yeast Clp1 mediates interactions between CF IA and CPF factors in pre-mRNA 3' end formation
Q38825682Transcription Dynamics in Living Cells.
Q29541446Transcription termination by nuclear RNA polymerases
Q35977821Tunable and reversible drug control of protein production via a self-excising degron.
Q37864536Unravelling the means to an end: RNA polymerase II transcription termination.

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