Identification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA

scientific article (publication date: 26 October 2001)

Identification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1074/JBC.M104488200
P3181OpenCitations bibliographic resource ID1877517
P698PubMed publication ID11483606

P2093author name stringL Liu
S Michaeli
X H Liang
P2860cites workNhp2p and Nop10p are essential for the function of H/ACA snoRNPsQ22008508
The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulationQ22065786
Small nucleolar RNA-guided post-transcriptional modification of cellular RNAsQ24535572
Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNAQ27938339
Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAsQ27939349
Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.Q27940038
Processing of the precursors to small nucleolar RNAs and rRNAs requires common componentsQ27940213
A computational screen for methylation guide snoRNAs in yeastQ28137615
Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNAQ28140569
The trans-spliceosomal U4 RNA from the monogenetic trypanosomatid Leptomonas collosoma. Cloning and identification of a transcribed trna-like element that controls its expressionQ28143120
Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAsQ28240607
Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplastsQ28304454
Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.Q28769587
The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functionsQ29616485
Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNAQ29618482
Function and synthesis of small nucleolar RNAsQ29618483
Guided tours: from precursor snoRNA to functional snoRNP.Q33680763
Three small nucleolar RNAs identified from the spliced leader-associated RNA locus in kinetoplastid protozoansQ33775099
Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.Q33868612
Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAsQ33890338
The U5 RNA of trypanosomes deviates from the canonical U5 RNA: the Leptomonas collosoma U5 RNA and its coding geneQ36543243
In vitro study of processing of the intron-encoded U16 small nucleolar RNA in Xenopus laevisQ36651769
Isolation and sequence of four small nuclear U RNA genes of Trypanosoma brucei subsp. brucei: identification of the U2, U4, and U6 RNA analogsQ36767990
A major tyrosine-phosphorylated protein of Trypanosoma brucei is a nucleolar RNA-binding proteinQ36802959
Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.Q38330838
The genes for small nucleolar RNAs in Trypanosoma brucei are organized in clusters and are transcribed as a polycistronic RNA.Q39543027
Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activitiesQ39574871
Characterization of a novel trypanosomatid small nucleolar RNA.Q39723468
Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAsQ42630007
Characterization of a candidate Trypanosoma brucei U1 small nuclear RNA gene.Q43545555
Expression studies on clustered trypanosomatid box C/D small nucleolar RNAsQ43559298
Precise identification of cleavage sites involved in the unusual processing of trypanosome ribosomal RNA.Q48341800
Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.Q54651150
P433issue43
P407language of work or nameEnglishQ1860
P304page(s)40313-8
P577publication date2001-10-26
P1433published inJournal of Biological ChemistryQ867727
P1476titleIdentification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA
P478volume276

Reverse relations

cites work (P2860)
Q34968595A comparative genome-wide study of ncRNAs in trypanosomatids
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Q36864657A pseudouridylation switch in rRNA is implicated in ribosome function during the life cycle of Trypanosoma brucei
Q24599324Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins
Q36620843Basal splicing factors regulate the stability of mature mRNAs in trypanosomes.
Q24550436Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea
Q29619824Biogenesis of small nucleolar ribonucleoproteins
Q34366130Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs.
Q33288607Combined experimental and computational approach to identify non-protein-coding RNAs in the deep-branching eukaryote Giardia intestinalis
Q34379519Computational prediction and validation of C/D, H/ACA and Eh_U3 snoRNAs of Entamoeba histolytica
Q35040997Depletion of key protein components of the RISC pathway impairs pre-ribosomal RNA processing
Q36423331Elucidating the role of C/D snoRNA in rRNA processing and modification in Trypanosoma brucei
Q34038898Experimental identification and analysis of macronuclear non-coding RNAs from the ciliate Tetrahymena thermophila
Q35690215Genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Leishmania major indicates conservation among trypanosomatids in the repertoire and in their rRNA targets
Q24530580Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.
Q24540282Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis
Q92420203Pseudouridines on Trypanosoma brucei spliceosomal small nuclear RNAs and their implication for RNA and protein interactions
Q21284197Psiscan: a computational approach to identify H/ACA-like and AGA-like non-coding RNA in trypanosomatid genomes
Q34041460RNA-seq analysis of small RNPs in Trypanosoma brucei reveals a rich repertoire of non-coding RNAs
Q27675593Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase
Q34571025Ribosomal RNA pseudouridines and pseudouridine synthases
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Q34298194Small nucleolar RNA interference in Trypanosoma brucei: mechanism and utilization for elucidating the function of snoRNAs
Q35145955Small nucleolar RNA interference induced by antisense or double-stranded RNA in trypanosomatids
Q34366754Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA.
Q28216313The expanding snoRNA world
Q37012928The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability
Q24540083The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.
Q37099978Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex
Q24651132Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis
Q34143005Two splicing factors carrying serine-arginine motifs, TSR1 and TSR1IP, regulate splicing, mRNA stability, and rRNA processing in Trypanosoma brucei.
Q34269391trans and cis splicing in trypanosomatids: mechanism, factors, and regulation

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