| scholarly article | Q13442814 |
| P50 | author | Ronald Breaker | Q2165727 |
| Jeffrey E Barrick | Q42531828 | ||
| P2093 | author name string | Ali Nahvi | |
| P2860 | cites work | Metabolite-binding RNA domains are present in the genes of eukaryotes | Q24540199 |
| Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element | Q24540210 | ||
| An mRNA structure that controls gene expression by binding FMN | Q24541465 | ||
| Do mRNAs act as direct sensors of small molecules to control their expression? | Q24555787 | ||
| An mRNA structure in bacteria that controls gene expression by binding lysine | Q24646894 | ||
| Rfam: an RNA family database | Q24682045 | ||
| An mRNA structure that controls gene expression by binding S-adenosylmethionine | Q28156437 | ||
| Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria | Q28176645 | ||
| Genetic control by a metabolite binding mRNA | Q28203849 | ||
| Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms | Q28207076 | ||
| Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression | Q28212624 | ||
| Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria | Q28216605 | ||
| Sensing Small Molecules by Nascent RNA | Q29039420 | ||
| Transcribed sequences of the Escherichia coli btuB gene control its expression and regulation by vitamin B12 | Q30446195 | ||
| Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes. | Q34215167 | ||
| Generating new ligand-binding RNAs by affinity maturation and disintegration of allosteric ribozymes | Q34363503 | ||
| Genetic control by metabolite-binding riboswitches | Q35549375 | ||
| Cobalamin (vitamin B12) repression of the Cob operon in Salmonella typhimurium requires sequences within the leader and the first translated open reading frame | Q42602497 | ||
| Plasmids for ectopic integration in Bacillus subtilis. | Q48057756 | ||
| An adenosyl-cobalamin (coenzyme-B12)-repressed translational enhancer in the cob mRNA of Salmonella typhimurium | Q50116328 | ||
| Vitamin B12 repression of the cob operon in Salmonella typhimurium: translational control of the cbiA gene | Q50147586 | ||
| Thermolysis of coenzymes B12 at physiological temperatures: activation parameters for cobalt-carbon bond homolysis and a quantitative analysis of the perturbation of the homolysis equilibrium by the ribonucleoside triphosphate reductase from Lactoba | Q73374592 | ||
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | prokaryotes | Q19081 |
| P304 | page(s) | 143-150 | |
| P577 | publication date | 2004-01-02 | |
| P1433 | published in | Nucleic Acids Research | Q135122 |
| P1476 | title | Coenzyme B12 riboswitches are widespread genetic control elements in prokaryotes | |
| P478 | volume | 32 |
| Q24537417 | 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter |
| Q40391999 | A B12-responsive internal ribosome entry site (IRES) element in human methionine synthase |
| Q39400680 | A New Facet of Vitamin B12: Gene Regulation by Cobalamin-Based Photoreceptors |
| Q96131612 | A SAM-I riboswitch with the ability to sense and respond to uncharged initiator tRNA |
| Q35775149 | A kissing loop is important for btuB riboswitch ligand sensing and regulatory control |
| Q90649064 | A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells |
| Q40346444 | A pseudoknot in the 3' non-core region of the glmS ribozyme enhances self-cleavage activity |
| Q35888869 | A rapid assay for affinity and kinetics of molecular interactions with nucleic acids |
| Q33483317 | A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi |
| Q40773171 | A theophylline responsive riboswitch based on helix slipping controls gene expression in vivo |
| Q24646968 | A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism |
| Q38284581 | An ABC-type cobalt transport system is essential for growth of Sinorhizobium meliloti at trace metal concentrations |
| Q36304892 | An Amoebal Grazer of Cyanobacteria Requires Cobalamin Produced by Heterotrophic Bacteria |
| Q46470776 | An atomistic view on carbocyanine photophysics in the realm of RNA. |
| Q42016958 | Analysis of riboswitch structure and function by an energy landscape framework |
| Q42548340 | Ancient, giant riboswitches at atomic resolution |
| Q27674522 | B12 cofactors directly stabilize an mRNA regulatory switch |
| Q41749869 | Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity. |
| Q36595446 | Characterization of a natural triple-tandem c-di-GMP riboswitch and application of the riboswitch-based dual-fluorescence reporter. |
| Q59798263 | Cobalamin (Vitamin B12) Induced a Shift in Microbial Composition and Metabolic Activity in an Colon Simulation |
| Q43059128 | Coenzyme B12 controls transcription of the Streptomyces class Ia ribonucleotide reductase nrdABS operon via a riboswitch mechanism |
| Q33826484 | Coenzyme B12 synthesis as a baseline to study metabolite contribution of animal microbiota |
| Q90261016 | Cofactor Selectivity in Methylmalonyl Coenzyme A Mutase, a Model Cobamide-Dependent Enzyme |
| Q28563578 | Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters |
| Q33408048 | Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization |
| Q36885037 | Comparative genomic reconstruction of transcriptional regulatory networks in bacteria |
| Q21184040 | Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes |
| Q37248286 | Complementation of Cobalamin Auxotrophy in Synechococcus sp. Strain PCC 7002 and Validation of a Putative Cobalamin Riboswitch In Vivo |
| Q34982434 | Computational identification of riboswitches based on RNA conserved functional sequences and conformations |
| Q33360833 | Consistent global structures of complex RNA states through multidimensional chemical mapping |
| Q58105542 | Construction of Boolean logic gates based on dual-vector circuits of multiple gene regulatory elements |
| Q35641235 | Core requirements of the adenine riboswitch aptamer for ligand binding |
| Q35009100 | Correlation of mRNA and protein in complex biological samples. |
| Q38680095 | Curing the Megaplasmid pTT27 from Thermus thermophilus HB27 and Maintaining Exogenous Plasmids in the Plasmid-Free Strain |
| Q42690829 | De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii. |
| Q39564148 | Deep sequencing of Porphyromonas gingivalis and comparative transcriptome analysis of a LuxS mutant |
| Q43268642 | Design, Optimization and Application of Small Molecule Biosensor in Metabolic Engineering |
| Q100455196 | Discovery of iron-sensing bacterial riboswitches |
| Q37264149 | Diversity of cobalamin riboswitches in the corrinoid-producing organohalide respirer Desulfitobacterium hafniense |
| Q92581710 | Effect of mutations on binding of ligands to guanine riboswitch probed by free energy perturbation and molecular dynamics simulations |
| Q33911028 | Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation |
| Q55300970 | Engineering a vitamin B12 high-throughput screening system by riboswitch sensor in Sinorhizobium meliloti. |
| Q21092874 | Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria |
| Q92993322 | Evidence that the nadA motif is a bacterial riboswitch for the ubiquitous enzyme cofactor NAD |
| Q56272004 | Evolutionary patterns of non-coding RNAs |
| Q34841172 | Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23. |
| Q29617439 | Gene regulation by riboswitches |
| Q34005304 | Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers. |
| Q33389504 | Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro |
| Q24679588 | Guanine riboswitch variants from Mesoplasma florum selectively recognize 2'-deoxyguanosine |
| Q21092872 | Identification of cyanobacterial non-coding RNAs by comparative genome analysis |
| Q24599848 | Inducible gene expression from the plastid genome by a synthetic riboswitch |
| Q46097751 | Life's utilization of B vitamins on early Earth |
| Q24676315 | Ligand binding and gene control characteristics of tandem riboswitches in Bacillus anthracis |
| Q34938013 | Light-dependent gene regulation by a coenzyme B12-based photoreceptor |
| Q35866012 | Members of the PpaA/AerR Antirepressor Family Bind Cobalamin |
| Q28109611 | Metabolite recognition principles and molecular mechanisms underlying riboswitch function |
| Q37400274 | Mg(2+)-induced conformational changes in the btuB riboswitch from E. coli |
| Q28817816 | Microbial production of vitamin B12: a review and future perspectives |
| Q28236551 | Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis |
| Q27648892 | Mutational Analysis of the Purine Riboswitch Aptamer Domain † |
| Q38154145 | Myelin damage due to local quantitative abnormalities in normal prion levels: evidence from subacute combined degeneration and multiple sclerosis |
| Q24564877 | New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control |
| Q54458887 | New insights into gene regulation--high-resolution structures of cobalamin riboswitches. |
| Q57492060 | Novel Pathway for Corrinoid Compounds Production in |
| Q42035503 | One pathway can incorporate either adenine or dimethylbenzimidazole as an alpha-axial ligand of B12 cofactors in Salmonella enterica |
| Q91815378 | Oral vitamin B12 supplement is delivered to the distal gut, altering the corrinoid profile and selectively depleting Bacteroides in C57BL/6 mice |
| Q36386026 | Post-transcriptional regulation of gene expression in Yersinia species |
| Q33701032 | Profiling of Campylobacter jejuni Proteome in Exponential and Stationary Phase of Growth |
| Q37224759 | Protein-DNA binding dynamics predict transcriptional response to nutrients in archaea |
| Q38856302 | RNA structure through multidimensional chemical mapping |
| Q35621422 | RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures |
| Q33914206 | RNase P cleaves transient structures in some riboswitches |
| Q58572630 | Recent advances and future trends of riboswitches: attractive regulatory tools |
| Q38569329 | Recent trends in the development of vitamin B12 derivatives for medicinal applications |
| Q24809590 | Reconstruction of regulatory and metabolic pathways in metal-reducing delta-proteobacteria |
| Q38435296 | Regulatory RNAs in Bacillus subtilis: a Gram-Positive Perspective on Bacterial RNA-Mediated Regulation of Gene Expression. |
| Q92149982 | Regulatory context drives conservation of glycine riboswitch aptamers |
| Q33818681 | Repression of btuB gene transcription in Escherichia coli by the GadX protein |
| Q98226239 | Riboflow: Using Deep Learning to Classify Riboswitches With ∼99% Accuracy |
| Q24669637 | Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs |
| Q52668476 | Riboswitch regulation in cyanobacteria is independent of their habitat adaptations. |
| Q88909469 | Riboswitches and Translation Control |
| Q28732021 | Riboswitches and the RNA world |
| Q34589699 | Riboswitches as antibacterial drug targets |
| Q34282616 | Riboswitches as hormone receptors: hypothetical cytokinin-binding riboswitches in Arabidopsis thaliana |
| Q24647454 | Riboswitches that sense S-adenosylhomocysteine and activate genes involved in coenzyme recycling |
| Q46829760 | Secondary structures and functional requirements for thiM riboswitches from Desulfovibrio vulgaris, Erwinia carotovora and Rhodobacter spheroides |
| Q57428661 | Serendipitous synthetic entrée to tetradehydro analogues of cobalamins |
| Q27324428 | Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq |
| Q34778344 | Single-molecule conformational dynamics of a biologically functional hydroxocobalamin riboswitch |
| Q48601682 | Site-specific dual-color labeling of long RNAs for single-molecule spectroscopy. |
| Q59793625 | Structural Studies of the 3',3'-cGAMP Riboswitch Induced by Cognate and Noncognate Ligands Using Molecular Dynamics Simulation |
| Q36253515 | Structural basis for gene regulation by a B12-dependent photoreceptor |
| Q27682800 | Structural insights into ligand binding and gene expression control by an adenosylcobalamin riboswitch |
| Q64966794 | Structural prediction of RNA switches using conditional base-pair probabilities. |
| Q37712492 | Tb3+-Cleavage Assays Reveal Specific Mg2+ Binding Sites Necessary to Pre-fold the btuB Riboswitch for AdoCbl Binding |
| Q34074189 | The MetJ regulon in gammaproteobacteria determined by comparative genomics methods |
| Q37041795 | The UA_handle: a versatile submotif in stable RNA architectures |
| Q24642578 | The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches |
| Q37909062 | The biological occurrence and trafficking of cobalt. |
| Q54379541 | The change of corrin-amides to carboxylates leads to altered structures of the B12-responding btuBriboswitch |
| Q21184134 | The distributions, mechanisms, and structures of metabolite-binding riboswitches |
| Q36581045 | The expression platform and the aptamer: cooperativity between Mg2+ and ligand in the SAM-I riboswitch |
| Q48270120 | The photochemistry and photobiology of vitamin B12. |
| Q26746091 | The role of mRNA structure in bacterial translational regulation |
| Q34965135 | The structural and functional diversity of metabolite-binding riboswitches |
| Q33906420 | The tetrapyrrole biosynthetic pathway and its regulation in Rhodobacter capsulatus |
| Q34369506 | Thermotoga lettingae can salvage cobinamide to synthesize vitamin B12. |
| Q34112189 | TonB-dependent transporters: regulation, structure, and function. |
| Q28821694 | Total Synthesis, Structure, and Biological Activity of Adenosylrhodibalamin, the Non-Natural Rhodium Homologue of Coenzyme B12 |
| Q36984456 | Toward reprogramming bacteria with small molecules and RNA. |
| Q35807600 | Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch |
| Q33737236 | Tuning protein expression using synonymous codon libraries targeted to the 5' mRNA coding region. |
| Q46419856 | Underlying mechanisms for syntrophic metabolism of essential enzyme cofactors in microbial communities |
| Q37919342 | Understanding the transcriptome through RNA structure |
| Q93081215 | Uneven distribution of cobamide biosynthesis and dependence in bacteria predicted by comparative genomics |
| Q43654128 | Unraveling vitamin B12-responsive gene regulation in algae |
| Q49402141 | Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools. |
| Q38160534 | Vitamin B(12) metabolism in Mycobacterium tuberculosis |
| Q90628355 | Vitamin B12 Regulates Glial Migration and Synapse Formation through Isoform-Specific Control of PTP-3/LAR PRTP Expression |
Search more.