| scholarly article | Q13442814 |
| P2093 | author name string | Tao Pan | |
| Jeffrey M Goodenbour | |||
| Kimberly A Dittmar | |||
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| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 12 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | e221 | |
| P577 | publication date | 2006-12-01 | |
| P1433 | published in | PLOS Genetics | Q1893441 |
| P1476 | title | Tissue-specific differences in human transfer RNA expression | |
| P478 | volume | 2 |
| Q36202272 | 5'-Terminal nucleotide variations in human cytoplasmic tRNAHisGUG and its 5'-halves |
| Q38752245 | A Deafness- and Diabetes-associated tRNA Mutation Causes Deficient Pseudouridinylation at Position 55 in tRNAGlu and Mitochondrial Dysfunction. |
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| Q36566622 | A dual fluorescent reporter for the investigation of methionine mistranslation in live cells |
| Q41193298 | A growth-essential Tetrahymena Piwi protein carries tRNA fragment cargo |
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| Q46244954 | A hypertension-associated mitochondrial DNA mutation introduces an m1G37 modification into tRNAMet, altering its structure and function |
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| Q43079066 | A new association between polymorphisms of the SLC6A7 gene in the chromosome 5q31-32 region and asthma |
| Q52606766 | A novel homozygous mutation in POLR3A gene causing 4H syndrome: a case report. |
| Q92920530 | A purely quantitative form of partial recessive IFN-γR2 deficiency caused by mutations of the initiation or second codon |
| Q36273990 | A quantitative model for the rate-limiting process of UGA alternative assignments to stop and selenocysteine codons |
| Q89897833 | A rare codon-based translational program of cell proliferation |
| Q94465947 | A single nucleotide variant of human PARP1 determines response to PARP inhibitors |
| Q64063417 | A synonymous germline variant in a gene encoding a cell adhesion molecule is associated with cutaneous mast cell tumour development in Labrador and Golden Retrievers |
| Q33564675 | Absence of neurological abnormalities in mice homozygous for the Polr3a G672E hypomyelinating leukodystrophy mutation |
| Q46243755 | Accurate Mapping of tRNA Reads. |
| Q33693618 | Alteration of protein function by a silent polymorphism linked to tRNA abundance |
| Q30043006 | Aminoacylation of Plasmodium falciparum tRNA(Asn) and insights in the synthesis of asparagine repeats |
| Q95266532 | Analysis of Codon Usage and Nucleotide Bias in Middle East Respiratory Syndrome Coronavirus Genes |
| Q34926065 | Analysis of synonymous codon usage in hepatitis A virus |
| Q45376266 | Analysis of synonymous codon usage in porcine reproductive and respiratory syndrome virus |
| Q95820976 | Analysis of the complement and molecular evolution of tRNA genes in cow |
| Q91894469 | Assessing cell-specific effects of genetic variations using tRNA microarrays |
| Q58779510 | Attenuated Codon Optimality Contributes to Neural-Specific mRNA Decay in Drosophila |
| Q64917167 | Attenuation of Human Respiratory Viruses by Synonymous Genome Recoding. |
| Q35042938 | BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies |
| Q31053878 | Balanced codon usage optimizes eukaryotic translational efficiency |
| Q34507103 | Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals |
| Q35089834 | Birth, life and death of nascent polypeptide chains. |
| Q38986628 | Capture, Unfolding, and Detection of Individual tRNA Molecules Using a Nanopore Device |
| Q34619748 | Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription |
| Q58434629 | Cells alter their tRNA abundance to selectively regulate protein synthesis during stress conditions |
| Q34328026 | Characterization of coding synonymous and non-synonymous variants in ADAMTS13 using ex vivo and in silico approaches |
| Q21202866 | Classification, diagnosis and potential mechanisms in pontocerebellar hypoplasia |
| Q47097515 | Co-adaption of tRNA gene copy number and amino acid usage influences translation rates in three life domains |
| Q90131473 | Coding regions affect mRNA stability in human cells |
| Q36692751 | Codon Bias as a Means to Fine-Tune Gene Expression |
| Q64107617 | Codon Usage Differences among Genes Expressed in Different Tissues of Drosophila melanogaster |
| Q89161085 | Codon Usage Pattern of Genes Involved in Central Nervous System |
| Q89695766 | Codon and amino acid content are associated with mRNA stability in mammalian cells |
| Q47668877 | Codon optimality, bias and usage in translation and mRNA decay |
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| Q94581112 | Codon usage similarity between viral and some host genes suggests a codon-specific translational regulation |
| Q36014081 | Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States. |
| Q33714068 | Comparative analysis of nuclear tRNA genes of Nasonia vitripennis and other arthropods, and relationships to codon usage bias |
| Q35040978 | Comparative whole genome sequencing reveals phenotypic tRNA gene duplication in spontaneous Schizosaccharomyces pombe La mutants. |
| Q36602379 | Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling |
| Q35853414 | Conservation of the relative tRNA composition in healthy and cancerous tissues |
| Q30417411 | Conserved regional 3' grouping of rare codons in the coding sequence of ocular prosecretory mitogen lacritin |
| Q91986341 | Control of translation elongation in health and disease |
| Q28083125 | Controlling translation via modulation of tRNA levels |
| Q33987983 | Could protein tertiary structure influence mammary transgene expression more than tissue specific codon usage? |
| Q38741284 | Cytoskeletal Filamin A Differentially Modulates RNA Polymerase III Gene Transcription in Transformed Cell Lines |
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| Q51495216 | Determining the fidelity of tRNA aminoacylation via microarrays. |
| Q34864861 | Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation |
| Q33968000 | Different types of secondary information in the genetic code. |
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| Q41220499 | Discharging tRNAs: a tug of war between translation and detoxification in Escherichia coli. |
| Q28681076 | Discovering RNA-protein interactome by using chemical context profiling of the RNA-protein interface |
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| Q33384434 | Dissection of a QTL hotspot on mouse distal chromosome 1 that modulates neurobehavioral phenotypes and gene expression |
| Q93367987 | Distributive enzyme binding controlled by local RNA context results in 3' to 5' directional processing of dicistronic tRNA precursors by Escherichia coli ribonuclease P |
| Q34712162 | Diverse cell stresses induce unique patterns of tRNA up- and down-regulation: tRNA-seq for quantifying changes in tRNA copy number |
| Q37568422 | Diversity of human tRNA genes from the 1000-genomes project |
| Q36368778 | Dynamic changes in translational efficiency are deduced from codon usage of the transcriptome |
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| Q35715852 | Efficient and quantitative high-throughput tRNA sequencing. |
| Q38298151 | Emerging roles of tRNA in adaptive translation, signalling dynamics and disease |
| Q89637735 | Engineering adeno-associated virus vectors for gene therapy |
| Q92855902 | Enjoy the Silence: Nearly Half of Human tRNA Genes Are Silent |
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| Q92548117 | Evidence of multifaceted functions of codon usage in translation within the model beetle Tribolium castaneum |
| Q27728059 | Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair |
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| Q41445289 | Evolving Mistranslating tRNAs Through a Phenotypically Ambivalent Intermediate in Saccharomyces cerevisiae. |
| Q104495218 | Expression of transgenes enriched in rare codons is enhanced by the MAPK pathway |
| Q37729435 | Factors That Shape Eukaryotic tRNAomes: Processing, Modification and Anticodon-Codon Use |
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| Q55668403 | Functional Interplay between Small Non-Coding RNAs and RNA Modification in the Brain. |
| Q38167278 | General approach for introduction of various chemical labels in specific RNA locations based on insertion of amino linkers. |
| Q33426332 | Generic algorithm to predict the speed of translational elongation: implications for protein biogenesis |
| Q30002378 | Genes adopt non-optimal codon usage to generate cell cycle-dependent oscillations in protein levels |
| Q33332469 | Genome landscapes and bacteriophage codon usage |
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| Q24657415 | Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p |
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| Q41902966 | Global and local depletion of ternary complex limits translational elongation |
| Q33327553 | Hidden layers of human small RNAs |
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| Q34439361 | High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface |
| Q38288593 | Hili Inhibits HIV Replication in Activated T Cells |
| Q37118249 | Human alpha and beta papillomaviruses use different synonymous codon profiles |
| Q37976956 | Human mitochondrial tRNA quality control in health and disease: a channelling mechanism? |
| Q50928445 | Human oncogene tissue-specific expression level significantly correlates with sequence compositional features. |
| Q90029316 | Hypertension-associated mitochondrial DNA 4401A>G mutation caused the aberrant processing of tRNAMet, all 8 tRNAs and ND6 mRNA in the light-strand transcript |
| Q50240123 | Hypomorphic mutations in POLR3A are a frequent cause of sporadic and recessive spastic ataxia. |
| Q57024747 | Identification and functional characterization of intermediate-size non-coding RNAs in maize |
| Q92838080 | Identification of a novel tRNA-derived RNA fragment exhibiting high prognostic potential in chronic lymphocytic leukemia |
| Q41983883 | Identification of the mRNA targets of tRNA-specific regulation using genome-wide simulation of translation |
| Q92492849 | Impacts of uORF codon identity and position on translation regulation |
| Q37448835 | Innate immune and chemically triggered oxidative stress modifies translational fidelity. |
| Q38027048 | Isolation of ribosome bound nascent polypeptides in vitro to identify translational pause sites along mRNA. |
| Q42458324 | Isotope-based analysis of modified tRNA nucleosides correlates modification density with translational efficiency |
| Q80709554 | It's a mod mod tRNA world |
| Q28269864 | Leucine-tRNA initiates at CUG start codons for protein synthesis and presentation by MHC class I |
| Q64038724 | Leukodystrophy-associated mutations down-regulate the RNA polymerase III transcript and important regulatory RNA |
| Q37297338 | Loss of immune escape mutations during persistent HCV infection in pregnancy enhances replication of vertically transmitted viruses |
| Q35575258 | Loss of the RNA polymerase III repressor MAF1 confers obesity resistance |
| Q97595691 | MAF1 is a chronic repressor of RNA polymerase III transcription in the mouse |
| Q35661618 | MIST, a Novel Approach to Reveal Hidden Substrate Specificity in Aminoacyl-tRNA Synthetases |
| Q38863765 | Maf1, A New PTEN Target Linking RNA and Lipid Metabolism |
| Q34341301 | Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo |
| Q92891230 | Measuring mRNA translation in neuronal processes and somata by tRNA-FRET |
| Q49827234 | Metabolic Labeling and Profiling of Transfer RNAs Using Macroarrays. |
| Q34880775 | Misacylation of specific nonmethionyl tRNAs by a bacterial methionyl-tRNA synthetase |
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| Q37227320 | Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. |
| Q24300846 | Mitochondrial aspartyl-tRNA synthetase deficiency causes leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation |
| Q21296841 | Mitochondrial translation and beyond: processes implicated in combined oxidative phosphorylation deficiencies |
| Q49788974 | Modifications and functional genomics of human transfer RNA. |
| Q37025123 | Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression. |
| Q92989855 | Modulation of HIV-1 Gag/Gag-Pol frameshifting by tRNA abundance |
| Q64271996 | Multi-level remodeling of transcriptional landscapes in aging and longevity |
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| Q35204958 | Mutations of POLR3A encoding a catalytic subunit of RNA polymerase Pol III cause a recessive hypomyelinating leukodystrophy |
| Q33853235 | New frontiers in translational control of the cancer genome |
| Q64882817 | Non-neutral evolution of H3.3-encoding genes occurs without alterations in protein sequence. |
| Q35194606 | Nuclear envelope and genome interactions in cell fate |
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| Q64228833 | Pathways to disease from natural variations in human cytoplasmic tRNAs |
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| Q51407946 | Preferential use of minor codons in the translation initiation region of human genes. |
| Q42930396 | Profiling non-lysyl tRNAs in HIV-1. |
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| Q35542161 | Recessive mutations in POLR3B, encoding the second largest subunit of Pol III, cause a rare hypomyelinating leukodystrophy |
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| Q92225766 | Schlafen 11 Restricts Flavivirus Replication |
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| Q50664186 | Selective Enzymatic Demethylation of N2 ,N2 -Dimethylguanosine in RNA and Its Application in High-Throughput tRNA Sequencing. |
| Q33649143 | Selective control of amino acid metabolism by the GCN2 eIF2 kinase pathway in Saccharomyces cerevisiae |
| Q37022882 | Sequence and structure-specific elements of HERG mRNA determine channel synthesis and trafficking efficiency |
| Q33642386 | Sequence variations of the human MPDZ gene and association with alcoholism in subjects with European ancestry |
| Q34482912 | Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers. |
| Q38637145 | Short stretches of rare codons regulate translation of the transcription factor ZEB2 in cancer cells |
| Q50065982 | Signaling to and from the RNA Polymerase III Transcription and Processing Machinery. |
| Q26768439 | Silent Polymorphisms: Can the tRNA Population Explain Changes in Protein Properties? |
| Q43244352 | Silent substitutions predictably alter translation elongation rates and protein folding efficiencies |
| Q26999350 | Single molecule fluorescence approaches shed light on intracellular RNAs |
| Q64988565 | Skeletal muscle differentiation drives a dramatic downregulation of RNA polymerase III activity and differential expression of Polr3g isoforms. |
| Q37591321 | Spatial organization of genes as a component of regulated expression |
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| Q48037181 | Synonymous nucleotide polymorphisms influence Dombrock blood group protein expression in K562 cells |
| Q33611492 | Synthetic versions of firefly luciferase and Renilla luciferase reporter genes that resist transgene silencing in sugarcane |
| Q34115800 | Systematic identification of tRNAome and its dynamics in Lactococcus lactis |
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| Q52649447 | Target-Cell-Directed Bioengineering Approaches for Gene Therapy of Hemophilia A. |
| Q92589618 | Targeted sequencing reveals expanded genetic diversity of human transfer RNAs |
| Q33955095 | The 3-base periodicity and codon usage of coding sequences are correlated with gene expression at the level of transcription elongation |
| Q38625586 | The Code of Silence: Widespread Associations Between Synonymous Codon Biases and Gene Function |
| Q42428566 | The Effect of Dysregulation of tRNA Genes and Translation Efficiency Mutations in Cancer and Neurodegeneration |
| Q55071218 | The Emerging Field of Epitranscriptomics in Neurodevelopmental and Neuronal Disorders. |
| Q36761574 | The Initiator Methionine tRNA Drives Secretion of Type II Collagen from Stromal Fibroblasts to Promote Tumor Growth and Angiogenesis |
| Q30441690 | The Mitochondrial Aminoacyl tRNA Synthetases: Genes and Syndromes. |
| Q38880246 | The Yin and Yang of Codon Usage. |
| Q24498670 | The biased nucleotide composition of the HIV genome: a constant factor in a highly variable virus |
| Q59340327 | The codon sequences predict protein lifetimes and other parameters of the protein life cycle in the mouse brain |
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| Q46010439 | The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis. |
| Q42126016 | The human Pol III transcriptome and gene information flow |
| Q41627594 | The initiator methionine tRNA drives cell migration and invasion leading to increased metastatic potential in melanoma |
| Q35620663 | The nicotinic acetylcholine receptor alpha 4 subunit contains a functionally relevant SNP Haplotype |
| Q36268130 | The relation of codon bias to tissue-specific gene expression in Arabidopsis thaliana. |
| Q38762513 | Tissue Specific Expression Levels of Apoptosis Involved Genes Have Correlations with Codon and Amino Acid Usage. |
| Q36113113 | Tissue- and Time-Specific Expression of Otherwise Identical tRNA Genes |
| Q35101518 | Transcript features alone enable accurate prediction and understanding of gene expression in S. cerevisiae |
| Q37871831 | Transcription by RNA polymerase III: more complex than we thought |
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| Q39506544 | Transcriptome-wide effects of a POLR3A gene mutation in patients with an unusual phenotype of striatal involvement |
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| Q35866256 | Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast |
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| Q29616661 | tRNAdb 2009: compilation of tRNA sequences and tRNA genes |
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