review article | Q7318358 |
scholarly article | Q13442814 |
P50 | author | Anton Komar | Q56224301 |
P2093 | author name string | Sujata Jha | |
P2860 | cites work | The ribosomal tunnel as a functional environment for nascent polypeptide folding and translational stalling | Q37840649 |
Proteolytic processing of picornaviral polyprotein | Q38004542 | ||
Cotranslational folding of globin | Q38346734 | ||
A tunnel in the large ribosomal subunit revealed by three-dimensional image reconstruction | Q69004129 | ||
Acylation of proteins with myristic acid occurs cotranslationally | Q69457820 | ||
Role of the code redundancy in determining cotranslational protein folding | Q69648000 | ||
Translationally associated helix-destabilizing activity in rabbit reticulocyte lysate | Q72406218 | ||
Synonymous codon substitutions affect ribosome traffic and protein folding during in vitro translation | Q73327926 | ||
Secondary structure formation of a transmembrane segment in Kv channels | Q81818122 | ||
Co-translational binding of GroEL to nascent polypeptides is followed by post-translational encapsulation by GroES to mediate protein folding | Q83929508 | ||
Activities of Ligatin and MCT-1/DENR in eukaryotic translation initiation and ribosomal recycling | Q24296405 | ||
The chaperones MPP11 and Hsp70L1 form the mammalian ribosome-associated complex | Q24307372 | ||
A protein complex required for signal-sequence-specific sorting and translocation | Q24315826 | ||
Human N-myristoyltransferase amino-terminal domain involved in targeting the enzyme to the ribosomal subcellular fraction | Q24323068 | ||
The yeast N(alpha)-acetyltransferase NatA is quantitatively anchored to the ribosome and interacts with nascent polypeptides | Q24653224 | ||
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution | Q27626400 | ||
A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing | Q27649896 | ||
Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome | Q27658307 | ||
Structural insight into nascent polypeptide chain-mediated translational stalling. | Q27658309 | ||
Recognition of a signal peptide by the signal recognition particle | Q27660413 | ||
Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution | Q27665394 | ||
Crystal structure of the eukaryotic ribosome | Q27666069 | ||
Cryo-EM structure of the E. coli translating ribosome in complex with SRP and its receptor | Q27666368 | ||
Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1 | Q27666453 | ||
The Sec translocase | Q27691857 | ||
RING domain E3 ubiquitin ligases | Q27860546 | ||
A functional chaperone triad on the yeast ribosome | Q27930569 | ||
Systems analyses reveal two chaperone networks with distinct functions in eukaryotic cells | Q27932599 | ||
N-terminal acetyltransferases and sequence requirements for N-terminal acetylation of eukaryotic proteins | Q27932762 | ||
Role of a ribosome-associated E3 ubiquitin ligase in protein quality control | Q27936843 | ||
Yeast methionine aminopeptidase type 1 is ribosome-associated and requires its N-terminal zinc finger domain for normal function in vivo. | Q27937078 | ||
RAC, a stable ribosome-associated complex in yeast formed by the DnaK-DnaJ homologs Ssz1p and zuotin. | Q27938678 | ||
Nascent-polypeptide-associated complex | Q28217074 | ||
Signal peptidases | Q28217085 | ||
Principles that govern the folding of protein chains | Q28236872 | ||
Human Mpp11 J protein: ribosome-tethered molecular chaperones are ubiquitous | Q28242853 | ||
Tissue-specific differences in human transfer RNA expression | Q28469081 | ||
The mechanism of eukaryotic translation initiation and principles of its regulation | Q29547270 | ||
Molecular chaperones and protein quality control | Q29617795 | ||
Codon usage and tRNA content in unicellular and multicellular organisms | Q29618300 | ||
Folding of newly translated proteins in vivo: the role of molecular chaperones | Q29619368 | ||
A "silent" polymorphism in the MDR1 gene changes substrate specificity | Q29619435 | ||
Identification of an SH3-binding motif in a new class of methionine aminopeptidases from Mycobacterium tuberculosis suggests a mode of interaction with the ribosome | Q30160246 | ||
Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency | Q39529314 | ||
23S rRNA assisted folding of cytoplasmic malate dehydrogenase is distinctly different from its self-folding | Q39615665 | ||
The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; a comparative cross-linking study with three different peptide families | Q39722844 | ||
Identification of nascent chain interaction sites on trigger factor | Q40171796 | ||
Mapping the path of the nascent peptide chain through the 23S in the 50S ribosomal subunit | Q40394669 | ||
Contacts between the growing peptide chain and the 23S RNA in the 50S ribosomal subunit | Q40399358 | ||
Signal sequence recognition and protein targeting to the endoplasmic reticulum membrane | Q40611469 | ||
Rapid degradation of a large fraction of newly synthesized proteins by proteasomes. | Q40883590 | ||
Nonuniform size distribution of nascent peptides. The effect of messenger RNA structure upon the rate of translation | Q41044314 | ||
Controlled proteolysis of nascent polypeptides in rat liver cell fractions. I. Location of the polypeptides within ribosomes | Q41121462 | ||
The efficiency of folding of some proteins is increased by controlled rates of translation in vivo. A hypothesis | Q41429992 | ||
alpha-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel | Q41619420 | ||
Three-dimensional structures of translating ribosomes by Cryo-EM. | Q41628474 | ||
Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome | Q41927521 | ||
Effects on translation pausing of alterations in protein and RNA components of the ribosome exit tunnel | Q42406802 | ||
Nascent peptide in the ribosome exit tunnel affects functional properties of the A-site of the peptidyl transferase center | Q42688854 | ||
Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast | Q42924383 | ||
Stereochemical analysis of ribosomal transpeptidation. Conformation of nascent peptide | Q43424112 | ||
Does the channel for nascent peptide exist inside the ribosome? Immune electron microscopy study | Q43431144 | ||
Flexibility of the nascent polypeptide chain within the ribosome--contacts from the peptide N-terminus to a specific region of the 30S subunit | Q43656210 | ||
L23 protein functions as a chaperone docking site on the ribosome | Q44134061 | ||
Instruction of translating ribosome by nascent peptide | Q44135169 | ||
Detecting and measuring cotranslational protein degradation in vivo | Q44397626 | ||
Trigger factor peptidyl-prolyl cis/trans isomerase activity is not essential for the folding of cytosolic proteins in Escherichia coli | Q44732908 | ||
[Role of the rare codon clusters in defining the boundaries of polypeptide chain regions with identical secondary structures in the process of co-translational folding of proteins] | Q44969368 | ||
Nonuniform size distribution of nascent globin peptides, evidence for pause localization sites, and a cotranslational protein-folding model | Q44984080 | ||
Human catechol-O-methyltransferase haplotypes modulate protein expression by altering mRNA secondary structure. | Q45345781 | ||
Features of ribosome-peptidyl-tRNA interactions essential for tryptophan induction of tna operon expression | Q46227073 | ||
Folding zones inside the ribosomal exit tunnel | Q46813554 | ||
Gel chromatographic analysis of nascent globin chains. Evidence of nonuniform size distribution. | Q47357823 | ||
Partial resistance of nascent polypeptide chains to proteolytic digestion due to ribosomal shielding | Q47708573 | ||
Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins. | Q47987631 | ||
Folding of the MS2 coat protein in Escherichia coli is modulated by translational pauses resulting from mRNA secondary structure and codon usage: a hypothesis. | Q49168556 | ||
Transient ribosomal attenuation coordinates protein synthesis and co-translational folding. | Q51836617 | ||
An analysis of the helix-to-strand transition between peptides with identical sequence. | Q52074685 | ||
Signal recognition particle binds to ribosome-bound signal sequences with fluorescence-detected subnanomolar affinity that does not diminish as the nascent chain lengthens. | Q52842432 | ||
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region. | Q54369921 | ||
Translation arrest requires two-way communication between a nascent polypeptide and the ribosome. | Q54463767 | ||
Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins. | Q54500735 | ||
Growth rate-optimised tRNA abundance and codon usage. | Q54561817 | ||
Ribosomes and ribosomal RNA as chaperones for folding of proteins. | Q54573724 | ||
The "+70 pause": hypothesis of a translational control of membrane protein assembly. | Q54580621 | ||
[Is there a channel for a peptide synthesized on a ribosome? Labeling of translating ribosomes with atomic tritium] | Q54771320 | ||
Mapping the electrostatic potential within the ribosomal exit tunnel | Q57132363 | ||
The Geometry of the Ribosomal Polypeptide Exit Tunnel | Q57954617 | ||
Opportunism knocks? | Q59079003 | ||
Role of the ribosome in protein folding | Q63378946 | ||
Ribosomes pause at specific sites during synthesis of membrane-bound chloroplast reaction center protein D1 | Q67941202 | ||
Nascent polypeptide chains emerge from the exit domain of the large ribosomal subunit: immune mapping of the nascent chain | Q36295457 | ||
Nascent peptide in the "birth canal" of the ribosome | Q36335638 | ||
Conserved residues Asp16 and Pro24 of TnaC-tRNAPro participate in tryptophan induction of Tna operon expression | Q36747828 | ||
The ribosomal peptidyl transferase | Q36820538 | ||
Origins and evolution of cotranslational transport to the ER. | Q36988945 | ||
Synonymous mutations and ribosome stalling can lead to altered folding pathways and distinct minima | Q37066299 | ||
Multiple conformational switches in a GTPase complex control co-translational protein targeting | Q37100829 | ||
Modulating the activity of the peptidyl transferase center of the ribosome. | Q37120124 | ||
Tertiary interactions within the ribosomal exit tunnel | Q37161999 | ||
Folding at the rhythm of the rare codon beat | Q37215108 | ||
The plasticity of a translation arrest motif yields insights into nascent polypeptide recognition inside the ribosome tunnel | Q37245890 | ||
A pause for thought along the co-translational folding pathway | Q37321409 | ||
A structural view of translation initiation in bacteria | Q37326466 | ||
Recent mechanistic insights into eukaryotic ribosomes | Q37401502 | ||
The eIF3 interactome reveals the translasome, a supercomplex linking protein synthesis and degradation machineries. | Q37462924 | ||
The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins | Q37506110 | ||
Cotranslational processing mechanisms: towards a dynamic 3D model | Q37568889 | ||
Interaction of secreted nascent chains with surrounding membrane in Bacillus subtilis | Q37595984 | ||
Silent (synonymous) SNPs: should we care about them? | Q37600712 | ||
N-glycan structures: recognition and processing in the ER. | Q37620688 | ||
Divergent stalling sequences sense and control cellular physiology. | Q37684316 | ||
Protein folding on the ribosome | Q37690961 | ||
Early targeting events during membrane protein biogenesis in Escherichia coli | Q37777484 | ||
Protein acetylation in archaea, bacteria, and eukaryotes | Q37795592 | ||
Participation of lectin chaperones and thiol oxidoreductases in protein folding within the endoplasmic reticulum | Q37811281 | ||
Adjustment of codon usage frequencies by codon harmonization improves protein expression and folding | Q37815057 | ||
Combining experiment and simulation in protein folding: closing the gap for small model systems | Q31145148 | ||
Peptide deformylase as an antibacterial target: a critical assessment | Q33253699 | ||
Protein folding by domain V of Escherichia coli 23S rRNA: specificity of RNA-protein interactions | Q33321822 | ||
Rare codons cluster | Q33377033 | ||
A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature, subunits and substrates | Q33491261 | ||
The ribosome-bound Hsp70 homolog Ssb of Saccharomyces cerevisiae | Q33540464 | ||
Transient tertiary structure formation within the ribosome exit port | Q33742605 | ||
A folding zone in the ribosomal exit tunnel for Kv1.3 helix formation | Q33831957 | ||
Structure and function of the methionine aminopeptidases | Q33857472 | ||
Binding specificity of Escherichia coli trigger factor | Q33951759 | ||
What recent ribosome structures have revealed about the mechanism of translation | Q34019810 | ||
An evolutionarily conserved mechanism for controlling the efficiency of protein translation | Q34022113 | ||
A role for codon order in translation dynamics. | Q34022117 | ||
Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity | Q34049097 | ||
N-terminal acetylation of cellular proteins creates specific degradation signals | Q34095411 | ||
Structure and function of the molecular chaperone Trigger Factor. | Q34096951 | ||
The ribosomal exit tunnel functions as a discriminating gate | Q34118341 | ||
Post-translational myristoylation: Fat matters in cellular life and death | Q34148521 | ||
The key function of a conserved and modified rRNA residue in the ribosomal response to the nascent peptide | Q34148533 | ||
N(α)-Acetylation of yeast ribosomal proteins and its effect on protein synthesis | Q34156533 | ||
The Ribosome Comes Alive | Q34292076 | ||
Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome | Q34359294 | ||
Sequence requirements for ribosome stalling by the arginine attenuator peptide | Q34412752 | ||
Organellar peptide deformylases: universality of the N-terminal methionine cleavage mechanism. | Q34460014 | ||
An evolving view of the eukaryotic oligosaccharyltransferase | Q34471377 | ||
Hearing silence: non-neutral evolution at synonymous sites in mammals | Q34485607 | ||
Yeast N(alpha)-terminal acetyltransferases are associated with ribosomes | Q34633391 | ||
Three-dimensional electron cryomicroscopy of ribosomes | Q34948162 | ||
Control of SecA and SecM translation by protein secretion | Q35737959 | ||
Theory of protein folding | Q35753216 | ||
Protein N-terminal methionine excision. | Q35805452 | ||
Unraveling the mechanism of protein N-glycosylation | Q35980135 | ||
NAC covers ribosome-associated nascent chains thereby forming a protective environment for regions of nascent chains just emerging from the peptidyl transferase center | Q36235831 | ||
Molecular guardians for newborn proteins: ribosome-associated chaperones and their role in protein folding | Q36288962 | ||
P275 | copyright license | Creative Commons Attribution 2.5 Generic | Q18810333 |
P433 | issue | 6 | |
P921 | main subject | messenger RNA | Q188928 |
protein biosynthesis | Q211935 | ||
peptide | Q172847 | ||
cell | Q7868 | ||
P304 | page(s) | 623-640 | |
P577 | publication date | 2011-04-29 | |
2011-06-01 | |||
P1433 | published in | Biotechnology Journal | Q15716480 |
P1476 | title | Birth, life and death of nascent polypeptide chains | |
P478 | volume | 6 |
Q41909628 | "Naked" FACT is unstable. |
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Q39222310 | Folding of proteins with a flavodoxin-like architecture |
Q38027048 | Isolation of ribosome bound nascent polypeptides in vitro to identify translational pause sites along mRNA. |
Q30485422 | Large-scale analysis of conserved rare codon clusters suggests an involvement in co-translational molecular recognition events |
Q55487507 | Modeling protein folding in vivo. |
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Q28118314 | Structural basis of glycogen branching enzyme deficiency and pharmacologic rescue by rational peptide design |
Q27027216 | The Not4 RING E3 Ligase: A Relevant Player in Cotranslational Quality Control |
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