| scholarly article | Q13442814 |
| P50 | author | Trisha N. Davis | Q30347547 |
| Michael Riffle | Q55138236 | ||
| P2093 | author name string | Alex Zelter | |
| Daniel Jaschob | |||
| P2860 | cites work | Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies | Q21145748 |
| Cytoscape: a software environment for integrated models of biomolecular interaction networks | Q24515682 | ||
| Chemical cross-linking and native mass spectrometry: A fruitful combination for structural biology | Q27007533 | ||
| The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling | Q27320362 | ||
| Kinetochore biorientation in Saccharomyces cerevisiae requires a tightly folded conformation of the Ndc80 complex | Q27346664 | ||
| The complete structure of the large subunit of the mammalian mitochondrial ribosome | Q27695673 | ||
| Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome | Q27700074 | ||
| VESICULAR TRANSPORT. A structure of the COPI coat and the role of coat proteins in membrane vesicle assembly | Q27701544 | ||
| Protein secondary structure prediction based on position-specific scoring matrices | Q27860483 | ||
| UCSF Chimera--a visualization system for exploratory research and analysis | Q27860666 | ||
| Molecular architecture of the 40S⋅eIF1⋅eIF3 translation initiation complex | Q27934341 | ||
| StavroX--a software for analyzing crosslinked products in protein interaction studies | Q28251875 | ||
| SIM-XL: A powerful and user-friendly tool for peptide cross-linking analysis | Q28256265 | ||
| xiNET: cross-link network maps with residue resolution | Q28650013 | ||
| A mass spectrometry proteomics data management platform | Q28728045 | ||
| UniProt: a hub for protein information | Q29547457 | ||
| Circos: an information aesthetic for comparative genomics | Q29547653 | ||
| Kojak: efficient analysis of chemically cross-linked protein complexes. | Q30373086 | ||
| Identification of cross-linked peptides from complex samples. | Q30418939 | ||
| XLink-DB: database and software tools for storing and visualizing protein interaction topology data | Q30542937 | ||
| Hekate: software suite for the mass spectrometric analysis and three-dimensional visualization of cross-linked protein samples | Q30559242 | ||
| DISOPRED3: precise disordered region predictions with annotated protein-binding activity | Q30633989 | ||
| In-depth analysis of tandem mass spectrometry data from disparate instrument types | Q31165068 | ||
| Architecture of the Human and Yeast General Transcription and DNA Repair Factor TFIIH | Q33285675 | ||
| JobCenter: an open source, cross-platform, and distributed job queue management system optimized for scalability and versatility. | Q34356746 | ||
| Xlink Analyzer: software for analysis and visualization of cross-linking data in the context of three-dimensional structures | Q35557713 | ||
| A Single α Helix Drives Extensive Remodeling of the Proteasome Lid and Completion of Regulatory Particle Assembly | Q36146766 | ||
| Regulation of outer kinetochore Ndc80 complex-based microtubule attachments by the central kinetochore Mis12/MIND complex | Q36179283 | ||
| A strategy for dissecting the architectures of native macromolecular assemblies | Q36716406 | ||
| Identification of cross-linked peptides from large sequence databases | Q37286234 | ||
| XL-MS: Protein cross-linking coupled with mass spectrometry | Q38529220 | ||
| A mass spectrometry-based hybrid method for structural modeling of protein complexes | Q38583775 | ||
| Interrogating the architecture of protein assemblies and protein interaction networks by cross-linking mass spectrometry. | Q38651850 | ||
| Architecture of an RNA polymerase II transcription pre-initiation complex | Q40082603 | ||
| Detecting cross-linked peptides by searching against a database of cross-linked peptide pairs | Q40420544 | ||
| xVis: a web server for the schematic visualization and interpretation of crosslink-derived spatial restraints | Q40958773 | ||
| Modeling of proteins and their assemblies with the Integrative Modeling Platform | Q43619967 | ||
| Semi-supervised learning for peptide identification from shotgun proteomics datasets. | Q45965072 | ||
| Structural Probing of a Protein Phosphatase 2A Network by Chemical Cross-Linking and Mass Spectrometry | Q63953718 | ||
| P4510 | describes a project that uses | SQL | Q47607 |
| P433 | issue | 8 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | database | Q8513 |
| visualization | Q451553 | ||
| data sharing | Q5227350 | ||
| P304 | page(s) | 2863-70 | |
| P577 | publication date | 2016-08-05 | |
| P1433 | published in | Journal of Proteome Research | Q3186939 |
| P1476 | title | ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data | |
| P478 | volume | 15 |
| Q58576382 | A Bifunctional Role for the UHRF1 UBL Domain in the Control of Hemi-methylated DNA-Dependent Histone Ubiquitylation |
| Q30402357 | CLMSVault: A Software Suite for Protein Cross-Linking Mass-Spectrometry Data Analysis and Visualization. |
| Q59353443 | Chemical cross-linking with mass spectrometry: a tool for systems structural biology |
| Q90692006 | Cross-ID: Analysis and Visualization of Complex XL-MS-Driven Protein Interaction Networks |
| Q58105967 | Cross-linking mass spectrometry: methods and applications in structural, molecular and systems biology |
| Q42380526 | CryoEM structure of Saccharomyces cerevisiae U1 snRNP offers insight into alternative splicing |
| Q88790545 | Identification of MS-Cleavable and Noncleavable Chemically Cross-Linked Peptides with MetaMorpheus |
| Q92020453 | Interactive Peptide Spectral Annotator: A Versatile Web-based Tool for Proteomic Applications |
| Q90482853 | Kinetochore-associated Stu2 promotes chromosome biorientation in vivo |
| Q57812171 | Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes |
| Q58599804 | Molecular structure of promoter-bound yeast TFIID |
| Q38651494 | Protein-protein cross-linking and human health: the challenge of elucidating with mass spectrometry. |
| Q90331625 | Proxl (Protein Cross-Linking Database): A Public Server, QC Tools, and Other Major Updates |
| Q50107547 | Structural prediction of protein models using distance restraints derived from cross-linking mass spectrometry data |
| Q37705617 | The Ndc80 complex bridges two Dam1 complex rings |
| Q100680975 | Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry |
| Q55518783 | xiSPEC: web-based visualization, analysis and sharing of proteomics data. |
Search more.