scholarly article | Q13442814 |
P50 | author | Paolo Uva | Q50728670 |
Nicola Soranzo | Q56486995 | ||
Gianluigi Zanetti | Q57544848 | ||
Nicole Soranzo | Q28050073 | ||
Massimiliano Orsini | Q29048220 | ||
P2093 | author name string | Gianmauro Cuccuru | |
Andrea Pinna | |||
Antonella Travaglione | |||
Giorgio Fotia | |||
Andrea Sbardellati | |||
P2860 | cites work | MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads | Q36368703 |
De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer | Q36586588 | ||
EDGE-pro: Estimated Degree of Gene Expression in Prokaryotic Genomes. | Q36702597 | ||
High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity. | Q38032123 | ||
Assembling millions of short DNA sequences using SSAKE. | Q51926970 | ||
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences | Q21092859 | ||
BFAST: an alignment tool for large scale genome resequencing | Q21142709 | ||
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 | ||
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence | Q24544402 | ||
Metagenomic microbial community profiling using unique clade-specific marker genes | Q24599864 | ||
Ab initio gene identification in metagenomic sequences | Q24620886 | ||
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing | Q24629733 | ||
Identifying bacterial genes and endosymbiont DNA with Glimmer | Q24653724 | ||
Fast and accurate short read alignment with Burrows-Wheeler transform | Q24653853 | ||
Velvet: algorithms for de novo short read assembly using de Bruijn graphs | Q24657623 | ||
BLAT—The BLAST-Like Alignment Tool | Q24682492 | ||
Fast gapped-read alignment with Bowtie 2 | Q27860699 | ||
OMERO: flexible, model-driven data management for experimental biology | Q28260901 | ||
SOAP: short oligonucleotide alignment program | Q28266228 | ||
SHRiMP2: sensitive yet practical SHort Read Mapping | Q28304260 | ||
ABySS: a parallel assembler for short read sequence data | Q29547263 | ||
Scaffolding pre-assembled contigs using SSPACE | Q29616857 | ||
SOPRA: Scaffolding algorithm for paired reads via statistical optimization | Q33615353 | ||
Interactive metagenomic visualization in a Web browser | Q34036161 | ||
Lentiviral hematopoietic stem cell gene therapy benefits metachromatic leukodystrophy | Q34356914 | ||
SEQuel: improving the accuracy of genome assemblies | Q36022139 | ||
P275 | copyright license | Creative Commons Attribution-NonCommercial 3.0 Unported | Q18810331 |
P6216 | copyright status | copyrighted | Q50423863 |
P433 | issue | 13 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | computational mathematics | Q1122491 |
P1104 | number of pages | 2 | |
P304 | page(s) | 1928-1929 | |
P577 | publication date | 2014-03-10 | |
P1433 | published in | Bioinformatics | Q4914910 |
P1476 | title | Orione, a web-based framework for NGS analysis in microbiology | |
P478 | volume | 30 |
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