| scholarly article | Q13442814 |
| P50 | author | Alfredo Berzal-Herranz | Q41482458 |
| P2093 | author name string | Pablo Ríos-Marco | |
| Cristina Romero-López | |||
| Alba Fernández-Sanlés | |||
| P2860 | cites work | RNA Secondary Structure in the Coding Region of Dengue Virus Type 2 Directs Translation Start Codon Selection and Is Required for Viral Replication | Q22337047 |
| A 5' RNA element promotes dengue virus RNA synthesis on a circular genome | Q22337098 | ||
| Evidence for the Existence of a Pseudoknot Structure at the 3‘ Terminus of the Flavivirus Genomic RNA † | Q22337292 | ||
| Specific requirements for elements of the 5' and 3' terminal regions in flavivirus RNA synthesis and viral replication | Q22337310 | ||
| A multigene analysis of the phylogenetic relationships among the flaviviruses (Family: Flaviviridae) and the evolution of vector transmission | Q22337371 | ||
| A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity | Q22337381 | ||
| Kissing-loop interaction between 5' and 3' ends of tick-borne Langat virus genome 'bridges the gap' between mosquito- and tick-borne flaviviruses in mechanisms of viral RNA cyclization: applications for virus attenuation and vaccine development | Q24289179 | ||
| Phylogeny of the Genus Flavivirus | Q24471099 | ||
| Identification of Specific Nucleotide Sequences within the Conserved 3′-SL in the Dengue Type 2 Virus Genome Required for Replication | Q24523550 | ||
| Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication | Q24538975 | ||
| Dengue virus utilizes a novel strategy for translation initiation when cap-dependent translation is inhibited | Q24544261 | ||
| Downstream secondary structure facilitates recognition of initiator codons by eukaryotic ribosomes | Q24556622 | ||
| Accumulation of a 3'-terminal genome fragment in Japanese encephalitis virus-infected mammalian and mosquito cells | Q24567669 | ||
| The polypyrimidine tract-binding protein is required for efficient dengue virus propagation and associates with the viral replication machinery | Q24658300 | ||
| In vitro resistance selection and in vivo efficacy of morpholino oligomers against West Nile virus | Q24678543 | ||
| Actively replicating West Nile virus is resistant to cytoplasmic delivery of siRNA. | Q24816212 | ||
| A single siRNA suppresses fatal encephalitis induced by two different flaviviruses | Q25255046 | ||
| Molecular evolution of the insect-specific flaviviruses | Q26824596 | ||
| Molecular characterization of virus-specific RNA produced in the brains of flavivirus-susceptible and -resistant mice after challenge with Murray Valley encephalitis virus | Q27107400 | ||
| RNA structures required for production of subgenomic flavivirus RNA | Q27107485 | ||
| Inhibition of flavivirus infections by antisense oligomers specifically suppressing viral translation and RNA replication | Q27469445 | ||
| Size heterogeneity in the 3' noncoding region of South American isolates of yellow fever virus | Q27469453 | ||
| Mov34 protein from mouse brain interacts with the 3' noncoding region of Japanese encephalitis virus | Q27469595 | ||
| Dengue virus structural differences that correlate with pathogenesis. | Q27469705 | ||
| Essential role of cyclization sequences in flavivirus RNA replication | Q27469848 | ||
| West Nile Virus Discriminates between DC-SIGN and DC-SIGNR for Cellular Attachment and Infection | Q27472821 | ||
| Sequence comparison and secondary structure analysis of the 3' noncoding region of flavivirus genomes reveals multiple pseudoknots. | Q27472958 | ||
| Fine Mapping of a cis-Acting Sequence Element in Yellow Fever Virus RNA That Is Required for RNA Replication and Cyclization | Q27473090 | ||
| Functional analysis of the tick-borne encephalitis virus cyclization elements indicates major differences between mosquito-borne and tick-borne flaviviruses | Q27473146 | ||
| West Nile Virus 5'-Cap Structure Is Formed by Sequential Guanine N-7 and Ribose 2'-O Methylations by Nonstructural Protein 5 | Q27477465 | ||
| Regulation of flavivirus RNA synthesis and capping | Q38127643 | ||
| Unmasking the information encoded as structural motifs of viral RNA genomes: a potential antiviral target. | Q38132094 | ||
| Noncoding subgenomic flavivirus RNA: multiple functions in West Nile virus pathogenesis and modulation of host responses | Q38182831 | ||
| RNA Aptamers as Molecular Tools to Study the Functionality of the Hepatitis C Virus CRE Region. | Q38296535 | ||
| RNA aptamer‐mediated interference of HCV replication by targeting the CRE‐5BSL3.2 domain | Q38318690 | ||
| Functional non-coding RNAs derived from the flavivirus 3' untranslated region. | Q38347334 | ||
| Mutational analysis of three predicted 5′-proximal stem-loop structures in the genome of tick-borne encephalitis virus indicates different roles in RNA replication and translation | Q38587440 | ||
| Cellular DDX3 regulates Japanese encephalitis virus replication by interacting with viral un-translated regions | Q39034822 | ||
| The DEAD-box RNA helicase DDX5 acts as a positive regulator of Japanese encephalitis virus replication by binding to viral 3' UTR. | Q39096182 | ||
| Differential RNA sequence requirement for dengue virus replication in mosquito and mammalian cells | Q39140481 | ||
| Sequences of terminal non-coding regions from four dengue-2 viruses isolated from patients exhibiting different disease severities | Q39210411 | ||
| Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells | Q39266291 | ||
| Genetic variation in the 3' non-coding region of dengue viruses. | Q39460462 | ||
| Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3’ UTR structures | Q39466005 | ||
| The F1 motif of dengue virus polymerase NS5 is involved in promoter-dependent RNA synthesis | Q39563110 | ||
| Translational regulation by the 3' untranslated region of the dengue type 2 virus genome | Q39782724 | ||
| Polypyrimidine tract-binding protein is relocated to the cytoplasm and is required during dengue virus infection in Vero cells. | Q39810745 | ||
| Poly(A)-binding protein binds to the non-polyadenylated 3' untranslated region of dengue virus and modulates translation efficiency | Q39883721 | ||
| Nucleic acids-based therapeutics in the battle against pathogenic viruses | Q37338992 | ||
| Infectious entry of West Nile virus occurs through a clathrin-mediated endocytic pathway | Q37511523 | ||
| Replication cycle and molecular biology of the West Nile virus | Q37566687 | ||
| Control of dengue virus translation and replication | Q37608056 | ||
| RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA | Q37670700 | ||
| Structure and Function of Flavivirus NS5 Methyltransferase | Q27478377 | ||
| Inhibition of dengue virus by novel, modified antisense oligonucleotides | Q27478439 | ||
| Interaction of TIA-1/TIAR with West Nile and dengue virus products in infected cells interferes with stress granule formation and processing body assembly | Q27478442 | ||
| Oligomeric rearrangement of tick-borne encephalitis virus envelope proteins induced by an acidic pH | Q27478446 | ||
| BHK cell proteins that bind to the 3' stem-loop structure of the West Nile virus genome RNA | Q27480296 | ||
| Dengue type 4 virus mutants containing deletions in the 3' noncoding region of the RNA genome: analysis of growth restriction in cell culture and altered viremia pattern and immunogenicity in rhesus monkeys | Q27480386 | ||
| Subgenomic replicons of the flavivirus Kunjin: construction and applications | Q27480783 | ||
| RNA-protein interactions: involvement of NS3, NS5, and 3' noncoding regions of Japanese encephalitis virus genomic RNA | Q27480815 | ||
| Translation elongation factor-1 alpha interacts with the 3' stem-loop region of West Nile virus genomic RNA | Q27480847 | ||
| Functional Analysis of Mosquito-Borne Flavivirus Conserved Sequence Elements within 3' Untranslated Region of West Nile Virus by Use of a Reporting Replicon That Differentiates between Viral Translation and RNA Replication | Q27485398 | ||
| West Nile Virus Entry Requires Cholesterol-Rich Membrane Microdomains and Is Independent of v 3 Integrin | Q27486120 | ||
| Identification of Mutated Cyclization Sequences That Permit Efficient Replication of West Nile Virus Genomes: Use in Safer Propagation of a Novel Vaccine Candidate | Q27486407 | ||
| Genetic Interactions among the West Nile Virus Methyltransferase, the RNA-Dependent RNA Polymerase, and the 5' Stem-Loop of Genomic RNA | Q27486408 | ||
| Presence of poly(A) in a flavivirus: significant differences between the 3' noncoding regions of the genomic RNAs of tick-borne encephalitis virus strains | Q27486540 | ||
| A complex RNA motif defined by three discontinuous 5-nucleotide-long strands is essential for Flavivirus RNA replication | Q27486794 | ||
| Structural and Functional Studies of the Promoter Element for Dengue Virus RNA Replication | Q27487528 | ||
| Conformational Changes in the Solution Structure of the Dengue Virus 5' End in the Presence and Absence of the 3' Untranslated Region | Q27487533 | ||
| The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis | Q27487755 | ||
| Extension of Flavivirus Protein C Differentially Affects Early RNA Synthesis and Growth in Mammalian and Arthropod Host Cells | Q27490326 | ||
| Inhibition of west nile virus replication by retrovirus-delivered small interfering RNA in human neuroblastoma cells | Q27490949 | ||
| The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production | Q27683468 | ||
| Nucleotide sequence of yellow fever virus: implications for flavivirus gene expression and evolution | Q27861057 | ||
| Insect-specific flaviviruses: a systematic review of their discovery, host range, mode of transmission, superinfection exclusion potential and genomic organization | Q28087355 | ||
| Translation elongation factor-1alpha, La, and PTB interact with the 3' untranslated region of dengue 4 virus RNA | Q28201031 | ||
| Flavivirus Infection Uncouples Translation Suppression from Cellular Stress Responses | Q28222114 | ||
| Induction of endoplasmic reticulum-derived replication-competent membrane structures by West Nile virus non-structural protein 4B | Q28538841 | ||
| Molecular archaeology of Flaviviridae untranslated regions: duplicated RNA structures in the replication enhancer of flaviviruses and pestiviruses emerged via convergent evolution | Q28657429 | ||
| Novel cis-acting element within the capsid-coding region enhances flavivirus viral-RNA replication by regulating genome cyclization | Q28681742 | ||
| Terminal structures of West Nile virus genomic RNA and their interactions with viral NS5 protein | Q39938749 | ||
| West Nile virus genome cyclization and RNA replication require two pairs of long-distance RNA interactions | Q40015473 | ||
| West Nile virus-induced cytoplasmic membrane structures provide partial protection against the interferon-induced antiviral MxA protein | Q40065552 | ||
| LSm1 binds to the Dengue virus RNA 3' UTR and is a positive regulator of Dengue virus replication. | Q40160687 | ||
| Dengue virus subgenomic RNA induces apoptosis through the Bcl-2-mediated PI3k/Akt signaling pathway | Q40225767 | ||
| RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase | Q40339851 | ||
| The 5′ and 3′ Downstream AUG Region Elements Are Required for Mosquito-Borne Flavivirus RNA Replication | Q40341823 | ||
| A balance between circular and linear forms of the dengue virus genome is crucial for viral replication | Q40345189 | ||
| Polypyrimidine tract-binding protein interacts with the 3' stem-loop region of Japanese encephalitis virus negative-strand RNA. | Q40369486 | ||
| Effective siRNA targeting of the 3' untranslated region of the West Nile virus genome | Q40399935 | ||
| Role of RNA structures present at the 3'UTR of dengue virus on translation, RNA synthesis, and viral replication | Q40400756 | ||
| Genetic analysis of Dengue 3 virus subtype III 5' and 3' non-coding regions | Q40420910 | ||
| Functional characterization of cis and trans activity of the Flavivirus NS2B-NS3 protease. | Q40456251 | ||
| The topology of bulges in the long stem of the flavivirus 3' stem-loop is a major determinant of RNA replication competence. | Q40463743 | ||
| Enhancement of dengue virus translation: role of the 3' untranslated region and the terminal 3' stem-loop domain | Q40505445 | ||
| Use of RNA interference to prevent lethal murine west nile virus infection | Q40513711 | ||
| La protein binds to NS5 and NS3 and to the 5' and 3' ends of Dengue 4 virus RNA. | Q40535972 | ||
| A stable full-length yellow fever virus cDNA clone and the role of conserved RNA elements in flavivirus replication | Q40561378 | ||
| In vitro RNA synthesis from exogenous dengue viral RNA templates requires long range interactions between 5'- and 3'-terminal regions that influence RNA structure | Q40605432 | ||
| Biological consequences of deletions within the 3'-untranslated region of flaviviruses may be due to rearrangements of RNA secondary structure | Q40631644 | ||
| Role of heparan sulfate for attachment and entry of tick-borne encephalitis virus | Q40653641 | ||
| Genetic variation in yellow fever virus: duplication in the 3' noncoding region of strains from Africa | Q40661126 | ||
| Growth-restricted dengue virus mutants containing deletions in the 5' noncoding region of the RNA genome | Q40688553 | ||
| The 3' stem loop of the West Nile virus genomic RNA can suppress translation of chimeric mRNAs | Q40786257 | ||
| The 3'-nucleotides of flavivirus genomic RNA form a conserved secondary structure | Q40806302 | ||
| Analysis of structural properties which possibly are characteristic for the 3'-terminal sequence of the genome RNA of flaviviruses | Q40807806 | ||
| Sequence analysis of the membrane protein V3 of the flavivirus West Nile virus and of its gene | Q41482972 | ||
| Analyses of the terminal sequences of West Nile virus structural proteins and of the in vitro translation of these proteins allow the proposal of a complete scheme of the proteolytic cleavages involved in their synthesis | Q41853781 | ||
| Replication enhancer elements within the open reading frame of tick-borne encephalitis virus and their evolution within the Flavivirus genus. | Q42026897 | ||
| Complete genome sequence, taxonomic assignment, and comparative analysis of the untranslated regions of the Modoc virus, a flavivirus with no known vector | Q42670333 | ||
| Inhibition of West Nile virus replication in cells stably transfected with vector-based shRNA expression system | Q42978821 | ||
| Complete sequence of two tick-borne flaviviruses isolated from Siberia and the UK: analysis and significance of the 5' and 3'-UTRs | Q42983161 | ||
| La protein binds the predicted loop structures in the 3' non-coding region of Japanese encephalitis virus genome: role in virus replication | Q42985916 | ||
| The majority of the nucleotides in the top loop of the genomic 3' terminal stem loop structure are cis-acting in a West Nile virus infectious clone | Q42989753 | ||
| The flavivirus-conserved penta-nucleotide in the 3' stem-loop of the West Nile virus genome requires a specific sequence and structure for RNA synthesis, but not for viral translation | Q42989770 | ||
| RNA elements within the 5' untranslated region of the West Nile virus genome are critical for RNA synthesis and virus replication | Q42993642 | ||
| Nucleotide sequence of the 5'-terminal untranslated part of the genome of the flavivirus West Nile virus | Q42993966 | ||
| Characterization of glycoprotein E C-end of West Nile virus and evaluation of its interaction force with alphaVbeta3 integrin as putative cellular receptor. | Q42998365 | ||
| Expression of vector-based small interfering RNA against West Nile virus effectively inhibits virus replication | Q43001536 | ||
| Terminal sequences of the genome and replicatioe-form RNA of the flavivirus west nile virus: absence of poly(A) and possible role in RNA replication | Q43034322 | ||
| Origin and evolution of flavivirus 5'UTRs and panhandles: trans-terminal duplications? | Q43039582 | ||
| Complete genomic sequence of Powassan virus: evaluation of genetic elements in tick-borne versus mosquito-borne flaviviruses | Q43049498 | ||
| RNA based evolutionary optimization | Q45131634 | ||
| Composition and three-dimensional architecture of the dengue virus replication and assembly sites | Q29615112 | ||
| A structural perspective of the flavivirus life cycle | Q29616269 | ||
| Dengue virus infectivity depends on envelope protein binding to target cell heparan sulfate | Q29618060 | ||
| The molecular biology of West Nile Virus: a new invader of the western hemisphere | Q29620664 | ||
| Conserved elements in the 3' untranslated region of flavivirus RNAs and potential cyclization sequences | Q29620940 | ||
| Sequence analysis of the viral core protein and the membrane-associated proteins V1 and NV2 of the flavivirus West Nile virus and of the genome sequence for these proteins | Q30403343 | ||
| The endoplasmic reticulum provides the membrane platform for biogenesis of the flavivirus replication complex | Q30484619 | ||
| Genome sequence analysis of Tamana bat virus and its relationship with the genus Flavivirus | Q30724279 | ||
| Interplay of RNA elements in the dengue virus 5' and 3' ends required for viral RNA replication | Q33877404 | ||
| Efficient HIV-1 inhibition by a 16 nt-long RNA aptamer designed by combining in vitro selection and in silico optimisation strategies. | Q34112867 | ||
| An RNA Pseudoknot Is Required for Production of Yellow Fever Virus Subgenomic RNA by the Host Nuclease XRN1 | Q34133213 | ||
| Error catastrophe and antiviral strategy | Q34153584 | ||
| New inferences from tree shape: numbers of missing taxa and population growth rates | Q34173397 | ||
| The utility of siRNA transcripts produced by RNA polymerase i in down regulating viral gene expression and replication of negative- and positive-strand RNA viruses | Q34227618 | ||
| AUF1 p45 promotes West Nile virus replication by an RNA chaperone activity that supports cyclization of the viral genome | Q34261742 | ||
| A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability | Q34301595 | ||
| Conserved RNA secondary structures in Flaviviridae genomes | Q34315929 | ||
| Flaviviral RNAs: weapons and targets in the war between virus and host | Q34432758 | ||
| Host factors involved in West Nile virus replication. | Q34498823 | ||
| Sequence and secondary structure analysis of the 5'-terminal region of flavivirus genome RNA. | Q34553290 | ||
| West Nile virus (WNV) genome RNAs with up to three adjacent mutations that disrupt long distance 5'-3' cyclization sequence basepairs are viable | Q34669442 | ||
| RNA Structure Duplications and Flavivirus Host Adaptation | Q34675614 | ||
| Identification of Cis-Acting Elements in the 3′-Untranslated Region of the Dengue Virus Type 2 RNA That Modulate Translation and Replication | Q35063142 | ||
| FUSE binding protein 1 interacts with untranslated regions of Japanese encephalitis virus RNA and negatively regulates viral replication | Q35076660 | ||
| Overlapping local and long-range RNA-RNA interactions modulate dengue virus genome cyclization and replication | Q35111041 | ||
| Heterogeneous nuclear ribonucleoprotein A2 participates in the replication of Japanese encephalitis virus through an interaction with viral proteins and RNA. | Q35362977 | ||
| Co-selection of West Nile virus nucleotides that confer resistance to an antisense oligomer while maintaining long-distance RNA/RNA base pairings | Q35448745 | ||
| Cap-dependent and cap-independent translation in eukaryotic systems | Q35773948 | ||
| West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response | Q35943585 | ||
| Standing your ground to exoribonucleases: Function of Flavivirus long non-coding RNAs | Q36553913 | ||
| Origin and evolution of 3'UTR of flaviviruses: long direct repeats as a basis for the formation of secondary structures and their significance for virus transmission | Q36707763 | ||
| Structural complexity of Dengue virus untranslated regions: cis -acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome | Q36814248 | ||
| A novel coding-region RNA element modulates infectious dengue virus particle production in both mammalian and mosquito cells and regulates viral replication in Aedes aegypti mosquitoes | Q36931812 | ||
| Identification of cis -Acting Nucleotides and a Structural Feature in West Nile Virus 3′-Terminus RNA That Facilitate Viral Minus Strand RNA Synthesis | Q36978834 | ||
| Anti-HCV RNA Aptamers Targeting the Genomic cis-Acting Replication Element | Q37148673 | ||
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 546 | |
| P577 | publication date | 2017-01-01 | |
| P1433 | published in | Frontiers in Microbiology | Q27723481 |
| P1476 | title | Functional Information Stored in the Conserved Structural RNA Domains of Flavivirus Genomes | |
| P478 | volume | 8 |
| Q32182965 | A Review of Flaviviruses that Have No Known Arthropod Vector |
| Q92733849 | An RNA Thermometer Activity of the West Nile Virus Genomic 3'-Terminal Stem-Loop Element Modulates Viral Replication Efficiency during Host Switching |
| Q66679531 | Endless Forms: Within-Host Variation in the Structure of the West Nile Virus RNA Genome during Serial Passage in Bird Hosts |
| Q90972687 | Flavivirus RNA-Dependent RNA Polymerase Interacts with Genome UTRs and Viral Proteins to Facilitate Flavivirus RNA Replication |
| Q52589934 | Full-Genome Characterization and Genetic Evolution of West African Isolates of Bagaza Virus |
| Q40037886 | Functional RNA during Zika virus infection |
| Q91644479 | Idiosyncrasies of Viral Noncoding RNAs Provide Insights into Host Cell Biology |
| Q115234218 | Information Encoded by the Flavivirus Genomes beyond the Nucleotide Sequence |
| Q47550801 | Know Your Enemy: Successful Bioinformatic Approaches to Predict Functional RNA Structures in Viral RNAs. |
| Q90014848 | Long non-coding subgenomic flavivirus RNAs have extended 3D structures and are flexible in solution |
| Q55100664 | Molecular Basis of Encapsidation of Hepatitis C Virus Genome. |
| Q89659957 | Nanoscale Structure Determination of Murray Valley Encephalitis and Powassan Virus Non-Coding RNAs |
| Q90233442 | Plant-Derived Purification, Chemical Synthesis, and In Vitro/In Vivo Evaluation of a Resveratrol Dimer, Viniferin, as an HCV Replication Inhibitor |
| Q56467498 | The 125th Lys and 145th Thr Amino Acids in the GTPase Domain of Goose Mx Confer Its Antiviral Activity against the Tembusu Virus |
| Q115234179 | The Genomic 3′ UTR of Flaviviruses Is a Translation Initiation Enhancer |
| Q47269183 | The Host Factor AUF1 p45 Supports Flavivirus Propagation by Triggering the RNA Switch Required for Viral Genome Cyclization |
| Q92876527 | The RGG/RG motif of AUF1 isoform p45 is a key modulator of the protein's RNA chaperone and RNA annealing activities |
| Q89879374 | The Role of the RNA-RNA Interactome in the Hepatitis C Virus Life Cycle |
| Q91796573 | The Third Annual Meeting of the European Virus Bioinformatics Center |
| Q91942393 | Universal RNA Secondary Structure Insight Into Mosquito-Borne Flavivirus (MBFV) cis-Acting RNA Biology |
| Q57168259 | What Does the Future Hold for Yellow Fever Virus? (II) |
Search more.