| P50 | author | Gorben P. Pijlman | Q42211880 |
| | Jelke J. Fros | Q47696595 |
| | Giel P. Göertz | Q54435464 |
| P2093 | author name string | Sandra R Abbo | |
| P2860 | cites work | Human papillomavirus G-quadruplexes | Q42268860 |
| | Mammalian mutation pressure, synonymous codon choice, and mRNA degradation | Q44743865 |
| | Doublet frequency analysis of fractionated vertebrate nuclear DNA. | Q46267233 |
| | Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster | Q47959827 |
| | The yeast KEM1 gene encodes a nuclease specific for G4 tetraplex DNA: implication of in vivo functions for this novel DNA structure | Q72034919 |
| | Dinucleotide and stop codon frequencies in single-stranded RNA viruses | Q73875850 |
| | A live-attenuated Zika virus vaccine candidate induces sterilizing immunity in mouse models | Q29352360 |
| | A detailed analysis of codon usage patterns and influencing factors in Zika virus | Q29365266 |
| | The crystal structure of Zika virus NS5 reveals conserved drug targets | Q29365336 |
| | Structure and function of the Zika virus full-length NS5 protein | Q29365369 |
| | Interferons and viruses: an interplay between induction, signalling, antiviral responses and virus countermeasures | Q29615028 |
| | Eukaryotic stress granules: the ins and outs of translation | Q29619569 |
| | Functional Information Stored in the Conserved Structural RNA Domains of Flavivirus Genomes | Q29994591 |
| | Neurodevelopmental protein Musashi 1 interacts with the Zika genome and promotes viral replication | Q30145537 |
| | Functional binding of hexanucleotides to 3C protease of hepatitis A virus | Q30155408 |
| | G3BP1, G3BP2 and CAPRIN1 are required for translation of interferon stimulated mRNAs and are targeted by a dengue virus non-coding RNA. | Q30411973 |
| | RNA editing by the host ADAR system affects the molecular evolution of the Zika virus | Q33817213 |
| | Evolution of the genome and the genetic code: selection at the dinucleotide level by methylation and polyribonucleotide cleavage | Q33828729 |
| | A New Clade of Insect-Specific Flaviviruses from Australian Anopheles Mosquitoes Displays Species-Specific Host Restriction | Q33896177 |
| | An RNA Pseudoknot Is Required for Production of Yellow Fever Virus Subgenomic RNA by the Host Nuclease XRN1 | Q34133213 |
| | Gene disruption of a G4-DNA-dependent nuclease in yeast leads to cellular senescence and telomere shortening | Q34174719 |
| | Molecular basis of base substitution hotspots in Escherichia coli | Q34183770 |
| | DNA methylation and the frequency of CpG in animal DNA. | Q34252001 |
| | 2'-O methylation of the viral mRNA cap by West Nile virus evades ifit1-dependent and -independent mechanisms of host restriction in vivo | Q34270459 |
| | A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability | Q34301595 |
| | The long and short of antiviral defense: small RNA-based immunity in insects | Q34415168 |
| | G-quadruplexes in viruses: function and potential therapeutic applications | Q34489819 |
| | Causes and implications of codon usage bias in RNA viruses | Q34602459 |
| | RNA Structure Duplications and Flavivirus Host Adaptation | Q34675614 |
| | Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla--selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses | Q34982966 |
| | Determinants of translation efficiency and accuracy | Q35006962 |
| | RNomics: identification and function of small, non-messenger RNAs | Q35019396 |
| | Dengue virus RNA structure specialization facilitates host adaptation | Q35031859 |
| | Interferon-induced Ifit proteins: their role in viral pathogenesis | Q35076741 |
| | Mosquito RNAi is the major innate immune pathway controlling arbovirus infection and transmission | Q35078008 |
| | Attenuation of tick-borne encephalitis virus using large-scale random codon re-encoding | Q35143637 |
| | HIV-1 nucleocapsid protein increases strand transfer recombination by promoting dimeric G-quartet formation | Q35313952 |
| | Large-scale recoding of an arbovirus genome to rebalance its insect versus mammalian preference | Q35484845 |
| | 5'- and 3'-noncoding regions in flavivirus RNA. | Q35616820 |
| | Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness | Q35681720 |
| | Neuronal Interferon Signaling Is Required for Protection against Herpes Simplex Virus Replication and Pathogenesis | Q35685766 |
| | West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response | Q35943585 |
| | Methylated constituents of Aedes albopictus poly (A)-containing messenger RNA | Q36184279 |
| | Flavivirus sfRNA suppresses antiviral RNA interference in cultured cells and mosquitoes and directly interacts with the RNAi machinery | Q36202801 |
| | Influenza viral mRNA contains internal N6-methyladenosine and 5'-terminal 7-methylguanosine in cap structures | Q36547480 |
| | Elevation of CpG frequencies in influenza A genome attenuates pathogenicity but enhances host response to infection | Q36703605 |
| | Origin and evolution of 3'UTR of flaviviruses: long direct repeats as a basis for the formation of secondary structures and their significance for virus transmission | Q36707763 |
| | Rational design of a flavivirus vaccine by abolishing viral RNA 2'-O methylation | Q36827340 |
| | RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts | Q36855920 |
| | Molecular evolution of Zika virus during its emergence in the 20(th) century | Q22241538 |
| | Zika virus: a previously slow pandemic spreads rapidly through the Americas | Q22242663 |
| | Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome | Q22337048 |
| | A 5' RNA element promotes dengue virus RNA synthesis on a circular genome | Q22337098 |
| | A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity | Q22337381 |
| | Comparative genomic analysis of pre-epidemic and epidemic Zika virus strains for virological factors potentially associated with the rapidly expanding epidemic | Q23302003 |
| | Zika virus: History, emergence, biology, and prospects for control | Q24261421 |
| | New hypotheses derived from the structure of a flaviviral Xrn1-resistant RNA: Conservation, folding, and host adaptation | Q24289234 |
| | Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq | Q24320240 |
| | Nucleotide composition of the Zika virus RNA genome and its codon usage | Q24497650 |
| | Why is CpG suppressed in the genomes of virtually all small eukaryotic viruses but not in those of large eukaryotic viruses? | Q24498511 |
| | Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts | Q24498559 |
| | The extent of codon usage bias in human RNA viruses and its evolutionary origin | Q24498571 |
| | Evolution of base composition and codon usage bias in the genus Flavivirus | Q24498646 |
| | Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication | Q24538975 |
| | Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons | Q24598126 |
| | mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain | Q24602633 |
| | Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing | Q24617483 |
| | Tissue Barriers to Arbovirus Infection in Mosquitoes | Q24701759 |
| | A Detailed Comparative Analysis of Codon Usage Bias in Zika Virus | Q25938826 |
| | Zika Virus Genomic RNA Possesses Conserved G-Quadruplexes Characteristic of the Flaviviridae Family | Q26262277 |
| | Functions of the 3' and 5' genome RNA regions of members of the genus Flavivirus | Q26700111 |
| | Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil | Q27107354 |
| | RNA structures required for production of subgenomic flavivirus RNA | Q27107485 |
| | Viral RNA switch mediates the dynamic control of flavivirus replicase recruitment by genome cyclization | Q27108074 |
| | Rational design of a live attenuated dengue vaccine: 2'-o-methyltransferase mutants are highly attenuated and immunogenic in mice and macaques | Q27334248 |
| | Essential role of cyclization sequences in flavivirus RNA replication | Q27469848 |
| | An RNA cap (nucleoside-2'-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization | Q27472613 |
| | West Nile Virus 5'-Cap Structure Is Formed by Sequential Guanine N-7 and Ribose 2'-O Methylations by Nonstructural Protein 5 | Q27477465 |
| | Structure and Function of Flavivirus NS5 Methyltransferase | Q27478377 |
| | Interaction between the Cellular Protein eEF1A and the 3'-Terminal Stem-Loop of West Nile Virus Genomic RNA Facilitates Viral Minus-Strand RNA Synthesis | Q27481473 |
| | N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection | Q27485442 |
| | Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome | Q27485661 |
| | Structural and Nonstructural Protein Genome Regions of Eastern Equine Encephalitis Virus Are Determinants of Interferon Sensitivity and Murine Virulence | Q27485898 |
| | Dynamics of Human and Viral RNA Methylation during Zika Virus Infection | Q27486503 |
| | The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production | Q27683468 |
| | Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans | Q27860867 |
| | Structures of NS5 Methyltransferase from Zika Virus | Q27928070 |
| | Insect-specific flaviviruses: a systematic review of their discovery, host range, mode of transmission, superinfection exclusion potential and genomic organization | Q28087355 |
| | PIWIs Go Viral: Arbovirus-Derived piRNAs in Vector Mosquitoes | Q28114575 |
| | Structural Insight into NS5 of Zika Virus Leading to the Discovery of MTase Inhibitors | Q28114685 |
| | The Zika virus methyltransferase: structure and functions for drug design perspectives | Q28114691 |
| | A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation | Q28267771 |
| | P bodies: at the crossroads of post-transcriptional pathways | Q28280058 |
| | A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates | Q28304600 |
| | 2'-O methylation of internal adenosine by flavivirus NS5 methyltransferase | Q28482139 |
| | 2'-O methylation of the viral mRNA cap evades host restriction by IFIT family members | Q28513232 |
| | XRN1 stalling in the 5' UTR of Hepatitis C virus and Bovine Viral Diarrhea virus is associated with dysregulated host mRNA stability | Q28543912 |
| | Zika virus disrupts molecular fingerprinting of human neurospheres | Q28582619 |
| | 5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II | Q28623635 |
| | Zika Virus Pathogenesis and Tissue Tropism | Q28733400 |
| | Dengue virus genomic variation associated with mosquito adaptation defines the pattern of viral non-coding RNAs and fitness in human cells | Q28954746 |
| | Determination of the Cell Permissiveness Spectrum, Mode of RNA Replication, and RNA-Protein Interaction of Zika Virus | Q29169004 |
| | The structure of Zika virus NS5 reveals a conserved domain conformation | Q29198404 |
| | Human DDX3 protein is a valuable target to develop broad spectrum antiviral agents | Q36904981 |
| | Identification of multiple RIG-I-specific pathogen associated molecular patterns within the West Nile virus genome and antigenome | Q37069062 |
| | A dynamic G-quadruplex region regulates the HIV-1 long terminal repeat promoter | Q37216613 |
| | YTHDF2 destabilizes m(6)A-containing RNA through direct recruitment of the CCR4-NOT deadenylase complex | Q37222906 |
| | Genetic inactivation of poliovirus infectivity by increasing the frequencies of CpG and UpA dinucleotides within and across synonymous capsid region codons. | Q37355985 |
| | Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes | Q37409237 |
| | Mutational Pressure in Zika Virus: Local ADAR-Editing Areas Associated with Pauses in Translation and Replication | Q37656930 |
| | RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA | Q37670700 |
| | Circles reshaping the RNA world: from waste to treasure | Q37692556 |
| | The 5' → 3' exoribonuclease XRN1/Pacman and its functions in cellular processes and development | Q37989882 |
| | RNA viruses and the host microRNA machinery | Q38081701 |
| | Noncoding subgenomic flavivirus RNA: multiple functions in West Nile virus pathogenesis and modulation of host responses | Q38182831 |
| | Flavivirus RNA methylation | Q38184248 |
| | Gene expression regulation mediated through reversible m⁶A RNA methylation | Q38198852 |
| | Single-stranded DNA aptamer that specifically binds to the influenza virus NS1 protein suppresses interferon antagonism. | Q38312431 |
| | Functional non-coding RNAs derived from the flavivirus 3' untranslated region. | Q38347334 |
| | Innate immune restriction and antagonism of viral RNA lacking 2׳-O methylation | Q38355923 |
| | Synonymous Virus Genome Recoding as a Tool to Impact Viral Fitness | Q38662520 |
| | The influence of CpG and UpA dinucleotide frequencies on RNA virus replication and characterization of the innate cellular pathways underlying virus attenuation and enhanced replication. | Q38735720 |
| | Bugs Are Not to Be Silenced: Small RNA Pathways and Antiviral Responses in Insects | Q38811634 |
| | RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies. | Q38930637 |
| | Higher catalytic efficiency of N-7-methylation is responsible for processive N-7 and 2'-O methyltransferase activity in dengue virus | Q38947082 |
| | Biochemical and genetic characterization of dengue virus methyltransferase | Q38975991 |
| | Cellular DDX3 regulates Japanese encephalitis virus replication by interacting with viral un-translated regions | Q39034822 |
| | Japanese encephalitis virus non-coding RNA inhibits activation of interferon by blocking nuclear translocation of interferon regulatory factor 3. | Q39141025 |
| | Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells | Q39266291 |
| | Evolution of codon usage in Zika virus genomes is host and vector specific | Q39301374 |
| | Functional RNA structures throughout the Hepatitis C Virus genome | Q39311508 |
| | Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures | Q39466005 |
| | Poly(A)-binding protein binds to the non-polyadenylated 3' untranslated region of dengue virus and modulates translation efficiency | Q39883721 |
| | Functional analysis of dengue virus cyclization sequences located at the 5' and 3'UTRs | Q40010611 |
| | West Nile virus genome cyclization and RNA replication require two pairs of long-distance RNA interactions | Q40015473 |
| | Dengue Non-coding RNA: TRIMmed for Transmission | Q40143413 |
| | Role of RNA structures present at the 3'UTR of dengue virus on translation, RNA synthesis, and viral replication | Q40400756 |
| | The methylation of adenovirus-specific nuclear and cytoplasmic RNA. | Q40577581 |
| | An exoribonuclease from saccharomyces cerevisiae: Effect of modifications of 5′ end groups on the hydrolysis of substrates to 5′ mononucleotides | Q40907601 |
| | Codon Pair Bias Is a Direct Consequence of Dinucleotide Bias | Q41004173 |
| | A determinant of Sindbis virus neurovirulence enables efficient disruption of Jak/STAT signaling. | Q41946436 |
| P921 | main subject | Zika virus | Q202864 |
| P5008 | on focus list of Wikimedia project | WikiProject Zika Corpus | Q54439832 |
| P577 | publication date | 2017-08-29 | |
| P1433 | published in | Virus Research | Q15749215 |
| P1476 | title | Functional RNA during Zika virus infection | |