Functional binding of hexanucleotides to 3C protease of hepatitis A virus

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Functional binding of hexanucleotides to 3C protease of hepatitis A virus is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKR1152
P932PMC publication ID3326307
P698PubMed publication ID22156376
P5875ResearchGate publication ID51866541

P2093author name stringBärbel S Blaum
Andrew J Benie
Georg Sczakiel
Hannelore Peters
Thomas Peters
Verena Gauss-Müller
Winfried Wünsche
Yuri Kusov
P2860cites workNMR study of parallel-stranded tetraplex formation by the hexadeoxynucleotide d(TG4T)Q59060282
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Sequence and structural determinants of the interaction between the 5'-noncoding region of picornavirus RNA and rhinovirus protease 3CQ72315781
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Identification of the oriI-binding site of poliovirus 3C protein by nuclear magnetic resonance spectroscopy.Q38293184
Specific binding of a hexanucleotide to HIV-1 reverse transcriptase: a novel class of bioactive moleculesQ38308590
Cell type-specific proteins which interact with the 5' nontranslated region of hepatitis A virus RNA.Q38314556
Poliovirus RNA synthesis utilizes an RNP complex formed around the 5'-end of viral RNA.Q38316546
Role of loop residues and cations on the formation and stability of dimeric DNA G-quadruplexesQ38318880
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Specific recognition of proteins by array-bound hexanucleotidesQ38337802
Modeling the electrophoresis of rigid polyions: application to lysozymeQ39661671
The 5' nontranslated region of hepatitis A virus RNA: secondary structure and elements required for translation in vitroQ40113123
Hepatitis A virus proteinase 3C binding to viral RNA: correlation with substrate binding and enzyme dimerization.Q40516783
Replication of a hepatitis A virus replicon detected by genetic recombination in vivoQ40710005
Potassium-dependent folding: a key to intracellular delivery of G-quartet oligonucleotides as HIV inhibitorsQ40736451
In vitro RNA binding of the hepatitis A virus proteinase 3C (HAV 3Cpro) to secondary structure elements within the 5' terminus of the HAV genome.Q41806897
Inhibition of hepatitis C virus IRES-mediated translation by oligonucleotidesQ42990544
Complete 1H, 13C and 15N backbone assignments for the hepatitis A virus 3C proteaseQ43546500
A picornaviral loop-to-loop replication complex.Q44095574
Mutations at KFRDI and VGK domains of enterovirus 71 3C protease affect its RNA binding and proteolytic activitiesQ44765873
A new model of dual interacting ligand binding sites on integrin alphaIIbbeta3.Q45171116
Crystal structure of foot-and-mouth disease virus 3C protease. New insights into catalytic mechanism and cleavage specificityQ45226865
Structure-assisted design of mechanism-based irreversible inhibitors of human rhinovirus 3C protease with potent antiviral activity against multiple rhinovirus serotypesQ27619756
Crystal structure of an inhibitor complex of the 3C proteinase from hepatitis A virus (HAV) and implications for the polyprotein processing in HAVQ27620759
The structure of the stemloop D subdomain of coxsackievirus B3 cloverleaf RNA and its interaction with the proteinase 3CQ27643129
NMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparisonQ27648817
Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G·C·G·C tetradQ27657084
Insights into cleavage specificity from the crystal structure of foot-and-mouth disease virus 3C protease complexed with a peptide substrateQ27658042
The high-resolution crystal structure of a parallel-stranded guanine tetraplexQ27730831
The refined crystal structure of the 3C gene product from hepatitis A virus: specific proteinase activity and RNA recognitionQ27734773
Refined X-ray crystallographic structure of the poliovirus 3C gene productQ27747494
NMRPipe: a multidimensional spectral processing system based on UNIX pipesQ27860859
Combinatorially selected guanosine-quartet structure is a potent inhibitor of human immunodeficiency virus envelope-mediated cell fusionQ28368943
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect dataQ29617299
Structure of human rhinovirus 3C protease reveals a trypsin-like polypeptide fold, RNA-binding site, and means for cleaving precursor polyproteinQ30194279
Adaptive recognition by nucleic acid aptamersQ30836242
DNA-XPA interactions: a (31)P NMR and molecular modeling study of dCCAATAACC association with the minimal DNA-binding domain (M98-F219) of the nucleotide excision repair protein XPA.Q30993262
Identification of cellular proteins enhancing activities of internal ribosomal entry sites by competition with oligodeoxynucleotidesQ31049788
A DNA aptamer prevents influenza infection by blocking the receptor binding region of the viral hemagglutininQ31111010
In vitro evolution of nucleic acidsQ34089633
Dual modes of modification of hepatitis A virus 3C protease by a serine-derived beta-lactone: selective crystallization and formation of a functional catalytic triad in the active siteQ34467806
CheckShift: automatic correction of inconsistent chemical shift referencingQ34694377
CheckShift improved: fast chemical shift reference correction with high accuracyQ34990468
NMR studies of protein interactions.Q36374377
Characterization of RNA aptamers that disrupt the RUNX1-CBFbeta/DNA complexQ37421114
Design, synthesis, and amplification of DNA pools for in vitro selectionQ37611706
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P921main subjecthepatitis AQ157661
Hepatitis A virusQ4112120
P304page(s)3042-3055
P577publication date2011-12-10
P1433published inNucleic Acids ResearchQ135122
P1476titleFunctional binding of hexanucleotides to 3C protease of hepatitis A virus
P478volume40

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cites work (P2860)
Q26775640Direct-acting Antivirals and Host-targeting Agents against the Hepatitis A Virus
Q40037886Functional RNA during Zika virus infection
Q36870503G-quadruplex-interacting compounds alter latent DNA replication and episomal persistence of KSHV.
Q34489819G-quadruplexes in viruses: function and potential therapeutic applications
Q54239430Identification of G-quadruplex forming sequences in three manatee papillomaviruses.

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