Pyrene: a probe to study protein conformation and conformational changes.

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Pyrene: a probe to study protein conformation and conformational changes. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3390/MOLECULES16097909
P932PMC publication ID6264589
P698PubMed publication ID22143550
P5875ResearchGate publication ID51854640

P2093author name stringVasanthy Narayanaswami
Arti B Patel
Gursharan Bains
P2860cites workCa2+-dependent binding of calcyclin to muscle tropomyosinQ71113603
The excimer fluorescence of pyrene-labeled tropomyosin. A probe of conformational dynamicsQ71401326
Pulse-fluorometry study on actin and heavy meromyosin using F-actin labelled with N-(1-pyrene)maleimideQ72135959
Acrylodan can label amino as well as sulfhydryl groups: results with low-density lipoprotein, lipoprotein[a], and lipid-free proteinsQ72919197
Fluorescence probing of yeast actin subdomain 3/4 hydrophobic loop 262-274. Actin-actin and actin-myosin interactions in actin filamentsQ73456263
Modifications induced by insulin-dependent diabetes mellitus on human placental Na+/K+-adenosine triphosphataseQ73848575
Interaction of the gonococcal porin P.IB with G- and F-actinQ74061807
Pyrene excimer fluorescence as a proximity probe for investigation of residual structure in the unfolded state of human carbonic anhydrase IIQ74121169
Modulation of apolipoprotein E structure by domain interaction: differences in lipid-bound and lipid-free formsQ80996400
Fluorescence studies of the conformation of pyrene-labeled tropomyosin: effects of F-actin and myosin subfragment 1Q93669747
Structure of the core domain of human cardiac troponin in the Ca(2+)-saturated formQ24306847
Crystal structure of troponin C in complex with troponin I fragment at 2.3-A resolutionQ24565007
Crystal structure of the vinculin tail suggests a pathway for activationQ27620822
Structure and mechanism of the lactose permease of Escherichia coliQ27641768
Structure of native and apo carbonic anhydrase II and structure of some of its anion-ligand complexesQ27642161
Molecular structure of an apolipoprotein determined at 2.5-A resolutionQ27658031
Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein EQ27663468
Refined structure of human carbonic anhydrase II at 2.0 A resolutionQ27728532
Refined crystal structure of troponin C from turkey skeletal muscle at 2.0 A resolutionQ27728544
Human apolipoprotein E. Role of arginine 61 in mediating the lipoprotein preferences of the E3 and E4 isoformsQ27730887
NMR solution structure of calcium-saturated skeletal muscle troponin CQ27732189
Structure determination and characterization of Saccharomyces cerevisiae profilinQ27764965
Microtubule-associated protein 1B is a component of cortical Lewy bodies and binds alpha-synuclein filamentsQ28141728
Structural based insights into the role of troponin in cardiac muscle pathophysiologyQ28235083
Microsomal glutathione S-transferase. Purification, initial characterization and demonstration that it is not identical to the cytosolic glutathione S-transferases A, B and CQ28582347
Clusters of charged residues in protein three-dimensional structuresQ30424416
Staphylococcal alpha-toxin: the role of the N-terminus in formation of the heptameric pore -- a fluorescence studyQ30427407
A model of troponin-I in complex with troponin-C using hybrid experimental data: the inhibitory region is a beta-hairpinQ30444015
Oxygen quenching of pyrene-lipid fluorescence in phosphatidylcholine vesicles. A probe for membrane organizationQ30446906
A peek into tropomyosin binding and unfolding on the actin filamentQ33486522
Differential effects of caldesmon on the intermediate conformational states of polymerizing actinQ33581475
The helix bundle: a reversible lipid binding motifQ33598704
Troponin: structure, properties, and mechanism of functioningQ33751882
Kinetics of regulated actin transitions measured by probes on tropomyosinQ33880219
Pyrene-labeled cardiac troponin C. Effect of Ca2+ on monomer and excimer fluorescence in solution and in myofibrilsQ34088622
Light-switching excimer probes for rapid protein monitoring in complex biological fluids.Q34161209
Apolipoprotein E: From lipid transport to neurobiologyQ34497951
Pyrene-labeled lipids as tools in membrane biophysics and cell biologyQ34717360
The amphipathic helix in the exchangeable apolipoproteins: a review of secondary structure and functionQ36031499
Helix periodicity, topology, and dynamics of membrane-associated alpha-synucleinQ36476930
Apolipoprotein E structure: insights into function.Q36527194
Fluorescent DNA base replacements: Reporters and sensors for biological systemsQ36653177
Troponin: structure, function and dysfunctionQ36728145
Disposition and dynamics: interdomain orientations in troponinQ36728156
Functional homodimers and heterodimers of recombinant smooth muscle tropomyosinQ36898618
Apolipoprotein E and cholesterol in aging and disease in the brainQ37009967
Differential regulation of actin polymerization and structure by yeast formin isoformsQ37285038
Denatured states of proteinsQ37285327
Characterization of the Ca(2+)-triggered conformational transition in troponin CQ37340396
Vinculin nucleates actin polymerization and modifies actin filament structureQ37431791
Pyrene excimer nucleic acid probes for biomolecule signalingQ37702198
Amphipathic helix motif: classes and propertiesQ37987535
A monomeric, biologically active, full-length human apolipoprotein E.Q50928824
Role of the head-to-tail overlap region in smooth and skeletal muscle beta-tropomyosin.Q54295386
Troponin-C-mediated calcium-sensitive changes in the conformation of troponin I detected by pyrene excimer fluorescenceQ59281364
Aggregation of pyrene-labeled microsomal glutathione S-transferase. Effect of concentrationQ60209910
Binding of pyrene isothiocyanate to the E1ATP site makes the H4-H5 cytoplasmic loop of Na+/K+-ATPase rigidQ62564423
Pyrene excimer fluorescence in rabbit skeletal alphaalphatropomyosin labeled with N-(1-pyrene)maleimide. A probe of sulfhydryl proximity and local chain separationQ67015334
Fluorimetry study of N-(1-pyrenyl)iodoacetamide-labelled F-actin. Local structural change of actin protomer both on polymerization and on binding of heavy meromyosinQ67288786
Ca2+-induced conformational changes in cardiac troponin C as measured by N-(1-pyrene)maleimide fluorescenceQ67926328
Fluorescence from pyrene-labeled native and reconstituted chicken gizzard tropomyosinsQ67967060
Fluorescence properties of acrylodan-labeled tropomyosin and tropomyosin-actin: evidence for myosin subfragment 1 induced changes in geometry between tropomyosin and actinQ67968501
Excimer fluorescence of pyrenyliodoacetamide-labeled tropomyosin: a probe of the state of tropomyosin in reconstituted muscle thin filamentsQ68747573
Ionic-strength- and pH-dependent conformational states of human plasma fibronectinQ70143373
Preferential assembly of the tropomyosin heterodimer: equilibrium studiesQ70176103
Proximity of sulfhydryl groups to the sites of interaction between components of the troponin complex from rabbit skeletal muscleQ70288451
Excimer fluorescence of pyrene-tropomyosin adductsQ70447467
Biomembrane structure and dynamics viewed by fluorescenceQ38380635
Pyrene-labeled lipids: versatile probes of membrane dynamics in vitro and in living cellsQ38678922
Conformational States of ChromatinQ40545158
Pyrene excimer fluorescence as a probe of protein conformational changeQ40617641
The amphipathic alpha helix: a multifunctional structural motif in plasma apolipoproteinsQ40737971
Intramolecular pyrene excimer fluorescence: a probe of proximity and protein conformational changeQ41487370
The use of actin labelled with N-(1-pyrenyl)iodoacetamide to study the interaction of actin with myosin subfragments and troponin/tropomyosinQ41808734
Pressure-relaxation studies of pyrene-labelled actin and myosin subfragment 1 from rabbit skeletal muscle. Evidence for two states of acto-subfragment 1.Q41914700
Pyrene excimer signaling molecular beacons for probing nucleic acids.Q41952900
Lipid-triggered conformational switch of apolipophorin III helix bundle to an extended helix organizationQ42050822
Pyrene excimer fluorescence: a spatially sensitive probe to monitor lipid-induced helical rearrangement of apolipophorin III.Q42056485
Insight into lipid surface recognition and reversible conformational adaptations of an exchangeable apolipoprotein by multidimensional heteronuclear NMR techniquesQ42061995
Disulfide bond engineering to monitor conformational opening of apolipophorin III during lipid bindingQ42063521
Hydrogen/deuterium exchange kinetics of apolipophorin-III in lipid-free and phospholipid-bound states. An analysis by Fourier transform infrared spectroscopyQ42063719
Alignment of the apolipophorin-III alpha-helices in complex with dimyristoylphosphatidylcholine. A unique spatial orientationQ42066302
Binding of insect apolipophorin III to dimyristoylphosphatidylcholine vesicles. Evidence for a conformational change.Q42068870
Contributions of the carboxyl-terminal helical segment to the self-association and lipoprotein preferences of human apolipoprotein E3 and E4 isoformsQ42173744
Microsomal glutathione transferase. Primary structureQ42226192
A monomeric human apolipoprotein E carboxyl-terminal domainQ42625731
Cooperativity and switching within the three-state model of muscle regulation.Q42690203
Pyrene fluorescence analysis offers new insights into the conformation of the lipoprotein-binding domain of human apolipoprotein E.Q43194660
Use of site-directed fluorescence labeling to study proximity relationships in the lactose permease of Escherichia coliQ43612696
Polarity of layer-by-layer deposited polyelectrolyte films as determined by pyrene fluorescenceQ43677147
Two-site attachment of troponin to pyrene-labeled tropomyosinQ43968476
Calcium-dependent protein-protein interactions induce changes in proximity relationships of Cys48 and Cys64 in chicken skeletal troponin I.Q44503931
A fluorescent probe-labeled Escherichia coli aspartate transcarbamoylase that monitors the allosteric conformational stateQ44634047
Inter-molecular coiled-coil formation in human apolipoprotein E C-terminal domainQ44659103
Excimer fluorescence of equine platelet tropomyosin labeled with N-(1-pyrenyl)iodoacetamideQ44675004
Effects of Parkinson's disease-linked mutations on the structure of lipid-associated alpha-synucleinQ44850741
Unambiguous detection of target DNAs by excimer-monomer switching molecular beaconsQ44887483
Human plasma fibronectin structure probed by steady-state fluorescence polarization: evidence for a rigid oblate structureQ45086435
Examination of lipid-bound conformation of apolipoprotein E4 by pyrene excimer fluorescenceQ45263580
Lipid-induced extension of apolipoprotein E helix 4 correlates with low density lipoprotein receptor binding ability.Q45930842
Dynamics of lactose permease of Escherichia coli determined by site-directed fluorescence labeling.Q45977350
Calcium-triggered membrane interaction of the alpha-synuclein acidic tailQ46168709
Discrete carboxyl-terminal segments of apolipoprotein E mediate lipoprotein association and protein oligomerizationQ46474280
Human apolipoprotein E4 domain interaction. Arginine 61 and glutamic acid 255 interact to direct the preference for very low density lipoproteinsQ46656933
Role of caldesmon in the Ca2+ regulation of smooth muscle thin filaments: evidence for a cooperative switching mechanismQ46953119
Binding of alpha-synuclein to brain vesicles is abolished by familial Parkinson's disease mutation.Q48384247
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue9
P407language of work or nameEnglishQ1860
P304page(s)7909-7935
P577publication date2011-09-14
P1433published inMoleculesQ151332
P1476titlePyrene: a probe to study protein conformation and conformational changes
P478volume16

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