| scholarly article | Q13442814 |
| P356 | DOI | 10.1111/TPJ.13261 |
| P698 | PubMed publication ID | 27401965 |
| P50 | author | Matthew Ierullo | Q88535539 |
| Nicholas Provart | Q88774804 | ||
| Darrell Desveaux | Q89700907 | ||
| Jamie Waese | Q110910649 | ||
| P2093 | author name string | Alan Moses | |
| Asher Pasha | |||
| Curtis Foong | |||
| Jim Fan | |||
| Robert Breit | |||
| Ryan S Austin | |||
| Shu Hiu | |||
| Ting Ting Wang | |||
| P2860 | cites work | Bioconductor: open software development for computational biology and bioinformatics | Q21194861 |
| Sequence logos: a new way to display consensus sequences | Q24598387 | ||
| MEME: discovering and analyzing DNA and protein sequence motifs | Q24680110 | ||
| Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction | Q25938986 | ||
| Structure of Pit-1 POU domain bound to DNA as a dimer: unexpected arrangement and flexibility | Q27734673 | ||
| Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana | Q27860555 | ||
| Transcriptional regulatory code of a eukaryotic genome | Q27933887 | ||
| The plant immune system | Q28131801 | ||
| Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae | Q28145700 | ||
| Plant pathogens and integrated defence responses to infection | Q28207107 | ||
| FLS2 | Q29541156 | ||
| GATEWAY vectors for Agrobacterium-mediated plant transformation | Q29615003 | ||
| A gene expression map of Arabidopsis thaliana development | Q29617330 | ||
| A general approach for discriminative de novo motif discovery from high-throughput data | Q30317710 | ||
| Isolation of a strong Arabidopsis guard cell promoter and its potential as a research tool | Q30481733 | ||
| JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles | Q30486475 | ||
| The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. | Q31106427 | ||
| The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access | Q31152945 | ||
| CressExpress: a tool for large-scale mining of expression data from Arabidopsis | Q31155017 | ||
| The transcriptional response of Arabidopsis to genotoxic stress - a high-density colony array study (HDCA). | Q31156616 | ||
| Random GFP::cDNA fusions enable visualization of subcellular structures in cells of Arabidopsis at a high frequency | Q33180061 | ||
| Transcriptional profiling of the Arabidopsis embryo | Q33267621 | ||
| An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets | Q33293530 | ||
| Discriminative motif discovery in DNA and protein sequences using the DEME algorithm | Q33302687 | ||
| Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis | Q33341829 | ||
| Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana | Q33801141 | ||
| Inferring transcription factor complexes from ChIP-seq data | Q33908006 | ||
| LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response | Q34178808 | ||
| ATTED-II Updates: Condition-Specific Gene Coexpression to Extend Coexpression Analyses and Applications to a Broad Range of Flowering Plants | Q34566240 | ||
| PLACE: a database of plant cis-acting regulatory DNA elements | Q34647301 | ||
| Plant cis-acting regulatory DNA elements (PLACE) database: 1999 | Q34691479 | ||
| Arabidopsis Polycomb Repressive Complex 2 binding sites contain putative GAGA factor binding motifs within coding regions of genes | Q34977650 | ||
| Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways | Q35008864 | ||
| Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions | Q35035044 | ||
| DECOD: fast and accurate discriminative DNA motif finding | Q35170092 | ||
| YMF: A program for discovery of novel transcription factor binding sites by statistical overrepresentation | Q35208601 | ||
| Determination and inference of eukaryotic transcription factor sequence specificity | Q35249717 | ||
| Discovery of core biotic stress responsive genes in Arabidopsis by weighted gene co-expression network analysis | Q35570011 | ||
| The role and regulation of programmed cell death in plant-pathogen interactions. | Q35649325 | ||
| Engineering plants with increased disease resistance: how are we going to express it? | Q36142415 | ||
| Plants and animals: a different taste for microbes? | Q36142914 | ||
| Suppression of host defense in compatible plant-Pseudomonas syringae interactions. | Q36151883 | ||
| Co-expression tools for plant biology: opportunities for hypothesis generation and caveats | Q37588006 | ||
| Discriminative motif analysis of high-throughput dataset. | Q37642338 | ||
| Transcriptional regulation of ABI3- and ABA-responsive genes including RD29B and RD29A in seeds, germinating embryos, and seedlings of Arabidopsis | Q38316099 | ||
| Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information. | Q38483720 | ||
| Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed | Q38520948 | ||
| Discriminative motif optimization based on perceptron training | Q38534164 | ||
| Chromatin. Ga-ga over GAGA factor | Q40544508 | ||
| Specificity, free energy and information content in protein–DNA interactions | Q40859873 | ||
| A suite of web-based programs to search for transcriptional regulatory motifs | Q41011114 | ||
| The limits of de novo DNA motif discovery. | Q41373458 | ||
| FlowerNet: a gene expression correlation network for anther and pollen development | Q41456267 | ||
| Seeder: discriminative seeding DNA motif discovery | Q42130605 | ||
| Carbon starved anther encodes a MYB domain protein that regulates sugar partitioning required for rice pollen development | Q43122779 | ||
| In vitro transcription from cauliflower mosaic virus promoters by a cell-free extract from tobacco cells | Q43589536 | ||
| Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant | Q44770058 | ||
| New pOp/LhG4 vectors for stringent glucocorticoid-dependent transgene expression in Arabidopsis | Q45294981 | ||
| A male gametophyte-specific monosaccharide transporter in Arabidopsis | Q47980988 | ||
| A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling | Q48654472 | ||
| Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana | Q50634684 | ||
| An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions | Q51525502 | ||
| Interaction between composite elements in the napA promoter: both the B-box ABA-responsive complex and the RY/G complex are necessary for seed-specific expression | Q52174610 | ||
| An algorithm for finding signals of unknown length in DNA sequences | Q57518608 | ||
| P433 | issue | 3 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Arabidopsis thaliana | Q158695 |
| P304 | page(s) | 490-504 | |
| P577 | publication date | 2016-07-12 | |
| P1433 | published in | The Plant Journal | Q15766987 |
| P1476 | title | New BAR tools for mining expression data and exploring Cis-elements in Arabidopsis thaliana | |
| P478 | volume | 88 |
| Q46777443 | Cis and trans determinants of epigenetic silencing by Polycomb repressive complex 2 in Arabidopsis. |
| Q50927089 | Heterodimerization of Arabidopsis calcium/proton exchangers contributes to regulation of guard cell dynamics and plant defense responses |
| Q89820747 | Hierarchical and Dynamic Regulation of Defense-Responsive Specialized Metabolism by WRKY and MYB Transcription Factors |
| Q45947840 | Predictive Models of Spatial Transcriptional Response to High Salinity. |
| Q48179425 | SUPPRESSOR OF FRIGIDA (SUF4) Supports Gamete Fusion via Regulating Arabidopsis EC1 Gene Expression. |
| Q36390975 | SeqEnrich: A tool to predict transcription factor networks from co-expressed Arabidopsis and Brassica napus gene sets. |
| Q49037492 | TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information. |
| Q91712059 | Test of Arabidopsis Space Transcriptome: A Discovery Environment to Explore Multiple Plant Biology Spaceflight Experiments |
| Q39093205 | The Bio-Analytic Resource for Plant Biology |
| Q38624979 | ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology. |
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