Methods for peptide identification by spectral comparison

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Methods for peptide identification by spectral comparison is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1037493202
P356DOI10.1186/1477-5956-5-3
P932PMC publication ID1783643
P698PubMed publication ID17227583
P5875ResearchGate publication ID6574237

P50authorChristian E H BeaudrieQ79570771
P2093author name stringJian Liu
Robert E Kearney
John J M Bergeron
Brian Carrillo
Alexander W Bell
Corey M Yanofsky
P2860cites workEnthoprotin: a novel clathrin-associated protein identified through subcellular proteomicsQ24673739
DeNovoID: a web-based tool for identifying peptides from sequence and mass tags deduced from de novo peptide sequencing by mass spectroscopy.Q24813129
Probability-based protein identification by searching sequence databases using mass spectrometry dataQ27860736
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein databaseQ27861106
Proteomics characterization of abundant Golgi membrane proteinsQ28141807
OLAV: towards high-throughput tandem mass spectrometry data identificationQ28202185
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometryQ28209613
Popitam: towards new heuristic strategies to improve protein identification from tandem mass spectrometry dataQ30808079
Improving large-scale proteomics by clustering of mass spectrometry data.Q30917029
An introduction to quadrupole-time-of-flight mass spectrometryQ31004760
A new matching algorithm for high resolution mass spectra.Q31100279
Using annotated peptide mass spectrum libraries for protein identificationQ33252895
Analysis of peptide MS/MS spectra from large-scale proteomics experiments using spectrum librariesQ33253787
Integrating 'top-down" and "bottom-up" mass spectrometric approaches for proteomic analysis of Shewanella oneidensisQ34184658
NovoHMM: a hidden Markov model for de novo peptide sequencingQ34467135
Fusogenic domains of golgi membranes are sequestered into specialized regions of the stack that can be released by mechanical fragmentation.Q36256637
Tandem MS analysis of brain clathrin-coated vesicles reveals their critical involvement in synaptic vesicle recyclingQ37094960
Identification of post-translational modifications by blind search of mass spectra.Q42674213
PRIMA: peptide robust identification from MS/MS spectra.Q45966021
Peptide sequence tags for fast database search in mass-spectrometry.Q45999304
A suboptimal algorithm for de novo peptide sequencing via tandem mass spectrometryQ46045730
Similarity among tandem mass spectra from proteomic experiments: detection, significance, and utilityQ46717073
On the normalization of a mass spectrum for comparison of two spectra.Q51706278
Peptide charge state determination for low-resolution tandem mass spectra.Q51953488
MS2Grouper: group assessment and synthetic replacement of duplicate proteomic tandem mass spectra.Q51970632
Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation.Q52008068
CHOMPER: a bioinformatic tool for rapid validation of tandem mass spectrometry search results associated with high-throughput proteomic strategiesQ78321645
A method for reducing the time required to match protein sequences with tandem mass spectraQ79163113
Quantitative proteomics analysis of the secretory pathwayQ79438532
P304page(s)3
P577publication date2007-01-16
P1433published inProteome ScienceQ15754354
P1476titleMethods for peptide identification by spectral comparison
P478volume5

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cites work (P2860)
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Q57475048Bioinformatics in Animal Proteomics
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Q30891496Building high-quality assay libraries for targeted analysis of SWATH MS data
Q36869682Clustering millions of tandem mass spectra
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Q34112038Diagnostic Markers for Tuberculosis Ascites: A Preliminary Study
Q33890377Fast parallel tandem mass spectral library searching using GPU hardware acceleration
Q24317703Inter-alpha-trypsin inhibitor heavy chain 4 is a novel marker of acute ischemic stroke
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Q38431361Psoriatic arthritis under a proteomic spotlight: application of novel technologies to advance diagnosis and management
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Q33329957Using BiblioSpec for creating and searching tandem MS peptide libraries

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