Single feature polymorphism discovery in rice

scientific article

Single feature polymorphism discovery in rice is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2007PLoSO...2..284K
P356DOI10.1371/JOURNAL.PONE.0000284
P932PMC publication ID1808426
P698PubMed publication ID17372626
P5875ResearchGate publication ID6434002

P50authorBabu ValliyodanQ54993895
Henry T NguyenQ86166811
Trupti JoshiQ42306087
P2093author name stringJing Qiu
Dong Xu
Rajesh Kumar
P2860cites workDevelopment of genome-wide DNA polymorphism database for map-based cloning of rice genesQ80363276
Genetic structure and diversity in Oryza sativa LQ24544940
Significance analysis of microarrays applied to the ionizing radiation responseQ24606608
Single-feature polymorphism discovery in the barley transcriptomeQ24812525
Whole-genome patterns of common DNA variation in three human populationsQ29616283
The map-based sequence of the rice genomeQ29617329
The small, the large and the wild: the value of comparison in plant genomicsQ33650506
Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.Q33964154
Plant molecular diversity and applications to genomicsQ34539590
FRIGIDA-independent variation in flowering time of natural Arabidopsis thaliana accessionsQ34576489
Light-response quantitative trait loci identified with composite interval and eXtreme array mapping in Arabidopsis thalianaQ34644933
Association mapping with single-feature polymorphismsQ34895123
Gene arrays are not just for measuring gene expressionQ35295908
An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignmentsQ37496459
Rapid array mapping of circadian clock and developmental mutations in Arabidopsis.Q38325987
Large-scale identification of single-feature polymorphisms in complex genomesQ40949524
Genetic diversity in yeast assessed with whole-genome oligonucleotide arraysQ41822025
Detecting single-feature polymorphisms using oligonucleotide arrays and robustified projection pursuitQ46151473
QTL mapping of grain quality traits from the interspecific cross Oryza sativa x O. glaberrimaQ47708413
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesaffyQ113334509
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)e284
P577publication date2007-03-14
P1433published inPLOS OneQ564954
P1476titleSingle feature polymorphism discovery in rice
P478volume2

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cites work (P2860)
Q34234343'maskBAD'--a package to detect and remove Affymetrix probes with binding affinity differences
Q33872825A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus
Q33581454A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays
Q47442140Allelic genome structural variations in maize detected by array comparative genome hybridization
Q36315524An improved algorithm for the detection of genomic variation using short oligonucleotide expression microarrays
Q37156447Array-based high-throughput DNA markers for crop improvement
Q21090794Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip
Q85195267Combining bulk segregation analysis and microarrays for mapping of the pH trait in melon
Q33872830Deep sequencing reveals the complex and coordinated transcriptional regulation of genes related to grain quality in rice cultivars
Q30443346Detection and validation of single feature polymorphisms in cowpea (Vigna unguiculata L. Walp) using a soybean genome array
Q33456179Detection and validation of single feature polymorphisms using RNA expression data from a rice genome array
Q33965586Detection of copy number variations in rice using array-based comparative genomic hybridization
Q30860037Detection of genomic deletions in rice using oligonucleotide microarrays
Q34268358Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).
Q33456222Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays
Q38601076Extracting genotype information of Arabidopsis thaliana recombinant inbred lines from transcript profiles established with high-density oligonucleotide arrays.
Q33842035Gains in QTL detection using an ultra-high density SNP map based on population sequencing relative to traditional RFLP/SSR markers
Q33523807Gene expression profiles deciphering rice phenotypic variation between Nipponbare (Japonica) and 93-11 (Indica) during oxidative stress
Q54535870Genome-wide identification, classification, evolutionary expansion and expression analyses of homeobox genes in rice.
Q35907634Genome-wide patterns of genetic variation in sweet and grain sorghum (Sorghum bicolor).
Q38480967Genome-wide patterns of large-size presence/absence variants in sorghum
Q35881099Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana
Q28744482High-resolution genotyping via whole genome hybridizations to microarrays containing long oligonucleotide probes
Q33567168High-throughput marker discovery in melon using a self-designed oligo microarray
Q33338643Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays
Q33493210Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
Q40185486Microarray-based large scale detection of single feature polymorphism in Gossypium hirsutum L.
Q33509641Oligonucleotide array discovery of polymorphisms in cultivated tomato (Solanum lycopersicum L.) reveals patterns of SNP variation associated with breeding
Q33700564Rice Snl6, a cinnamoyl-CoA reductase-like gene family member, is required for NH1-mediated immunity to Xanthomonas oryzae pv. oryzae
Q33439983SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
Q39987084Single feature polymorphisms between two rice cultivars detected using a median polish method
Q33497023Single-feature polymorphism discovery by computing probe affinity shape powers
Q36943886Single-feature polymorphism mapping of isogenic rice lines identifies the influence of terpene synthase on brown planthopper feeding preferences

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