Meta-analysis reveals an association of PTPN22 C1858T with autoimmune diseases, which depends on the localization of the affected tissue

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Meta-analysis reveals an association of PTPN22 C1858T with autoimmune diseases, which depends on the localization of the affected tissue is …
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meta-analysisQ815382
scholarly articleQ13442814

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P6179Dimensions Publication ID1046281384
P356DOI10.1038/GENE.2012.46
P698PubMed publication ID23076337
P5875ResearchGate publication ID232280646

P50authorSaleh IbrahimQ43139623
P2093author name stringJ Zheng
X Yu
F Petersen
P2860cites workConfirmation of the genetic association of CTLA4 and PTPN22 with ANCA-associated vasculitisQ21261514
A frameshift mutation in NOD2 associated with susceptibility to Crohn's diseaseQ22251291
PTPN22 gene regulates natural killer cell proliferation during in vitro expansionQ24316976
Cutting edge: the PTPN22 allelic variant associated with autoimmunity impairs B cell signalingQ24318432
Replication of putative candidate-gene associations with rheumatoid arthritis in >4,000 samples from North America and Sweden: association of susceptibility with PTPN22, CTLA4, and PADI4Q24538382
Shared and distinct genetic variants in type 1 diabetes and celiac diseaseQ24623113
Variant of TYR and autoimmunity susceptibility loci in generalized vitiligoQ24629443
Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locusQ24630434
Genome-wide association study in alopecia areata implicates both innate and adaptive immunityQ24632461
Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variantsQ24633806
Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosisQ24635370
Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's diseaseQ27860821
Recent advances in the genetics of autoimmune diseaseQ28238782
Protein tyrosine phosphatase PTPN22 in human autoimmunityQ28242744
Differential association of the PTPN22 coding variant with autoimmune diseases in a Dutch populationQ28248685
A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetesQ28248848
A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritisQ28267921
Genetic association of the R620W polymorphism of protein tyrosine phosphatase PTPN22 with human SLE.Q28273794
Association of the PTPN22 R620W polymorphism with anti-topoisomerase I- and anticentromere antibody-positive systemic sclerosisQ28276277
Autoimmune-associated lymphoid tyrosine phosphatase is a gain-of-function variantQ28280659
PTPN22, PDCD1 and CYP27B1 polymorphisms and susceptibility to type 1 diabetes in Polish patientsQ28284060
Replication of an association between the lymphoid tyrosine phosphatase locus (LYP/PTPN22) with type 1 diabetes, and evidence for its role as a general autoimmunity locusQ28289699
Association of a functional single-nucleotide polymorphism of PTPN22, encoding lymphoid protein phosphatase, with rheumatoid arthritis and systemic lupus erythematosusQ28301821
Association of R602W in a protein tyrosine phosphatase gene with a high risk of rheumatoid arthritis in a British population: evidence for an early onset/disease severity effectQ28301839
PEST domain-enriched tyrosine phosphatase (PEP) regulation of effector/memory T cellsQ28590230
Genome-wide association analysis identifies three psoriasis susceptibility lociQ28924376
The R620W C/T polymorphism of the gene PTPN22 is associated with SLE independently of the association of PDCD1.Q30160168
The PTPN22 R620W polymorphism associates with RF positive rheumatoid arthritis in a dose-dependent manner but not with HLA-SE statusQ30160337
Association of the lymphoid tyrosine phosphatase R620W variant with rheumatoid arthritis, but not Crohn's disease, in Canadian populationsQ33218161
Susceptibility to type 1 diabetes conferred by the PTPN22 C1858T polymorphism in the Spanish populationQ33294087
Prevalence of common disease-associated variants in Asian Indians.Q33318138
Defining the role of the MHC in autoimmunity: a review and pooled analysisQ33330857
The role of PTPN22 gene polymorphism in childhood immune thrombocytopenic purpuraQ33395420
Lymphoid tyrosine phosphatase R620W variant and inflammatory bowel disease in TunisiaQ33612241
Association of the C8orf13-BLK region with systemic sclerosis in North-American and European populationsQ33653276
Evaluation of the rheumatoid arthritis susceptibility loci HLA-DRB1, PTPN22, OLIG3/TNFAIP3, STAT4 and TRAF1/C5 in an inception cohortQ33923376
Overlap of disease susceptibility loci for rheumatoid arthritis and juvenile idiopathic arthritisQ34110041
The susceptibility loci juvenile idiopathic arthritis shares with other autoimmune diseases extend to PTPN2, COG6, and ANGPT1Q34268514
Primary sclerosing cholangitis: diagnosis and managementQ34498568
Rheumatoid arthritis association with the FCRL3 -169C polymorphism is restricted to PTPN22 1858T-homozygous individuals in a Canadian populationQ34585615
The association between the PTPN22 1858C>T variant and type 1 diabetes depends on HLA risk and GAD65 autoantibodiesQ34607188
Association of functional variants of PTPN22 and tp53 in psoriatic arthritis: a case-control studyQ34896193
Association of PTPN22 1858 single-nucleotide polymorphism with rheumatoid arthritis in a German cohort: higher frequency of the risk allele in male compared to female patientsQ34897145
A single-nucleotide polymorphism in the gene encoding lymphoid protein tyrosine phosphatase (PTPN22) confers susceptibility to generalised vitiligoQ46599062
Testing for linkage and association with rheumatoid arthritis a ptpn22 promoter polymorphism reported to be associated and linked with type 1 diabetes in the Caucasian populationQ46599416
C1858T functional variant of PTPN22 gene is not associated with celiac disease genetic predispositionQ46660163
Association of the PTPN22 C1858T single-nucleotide polymorphism with rheumatoid arthritis phenotypes in an inception cohort.Q46689842
PTPN22 C1858T polymorphism in Colombian patients with autoimmune diseasesQ46703705
A case-control study of tyrosine phosphatase (PTPN22) confirms the lack of association with Crohn's diseaseQ46704913
The functional genetic variation in the PTPN22 gene has a negligible effect on the susceptibility to develop inflammatory bowel disease.Q46721529
A general autoimmunity gene (PTPN22) is not associated with inflammatory bowel disease in a British populationQ46721533
Mutation screening of PTPN22: association of the 1858T-allele with Addison's diseaseQ46732649
The functional R620W variant of the PTPN22 gene is associated with celiac disease.Q46808828
Association between PTPN22 C1858T and type 1 diabetes: a replication in continental ItalyQ46819653
The PTPN22 620W allele is a risk factor for Wegener's granulomatosisQ46829597
Sex-specific association of PTPN22 1858T with type 1 diabetes but not with Hashimoto's thyroiditis or Addison's disease in the German populationQ46831303
The protein tyrosine phosphatase nonreceptor 22 (PTPN22) is associated with high GAD antibody titer in latent autoimmune diabetes in adults: Non Insulin Requiring Autoimmune Diabetes (NIRAD) Study 3.Q46868313
Evaluating the role of the 620W allele of protein tyrosine phosphatase PTPN22 in Crohn's disease and multiple sclerosisQ46878243
Association of PTPN22 1858C/T polymorphism with vitiligo susceptibility in Gujarat population.Q46883159
Sex-specific association of the human PTPN22 1858T-allele with type 1 diabetes.Q46900842
Association of the PTPN22*R620W polymorphism with autoimmune myasthenia gravis.Q46912103
Male restricted genetic association of variant R620W in PTPN22 with psoriatic arthritisQ46926230
Multiple sclerosis candidate autoantigens except myelin oligodendrocyte glycoprotein are transcribed in human thymusQ48478016
The 1858T PTPN22 gene variant contributes to a genetic risk of type 1 diabetes in a Ukrainian population.Q51807268
No independent role of the -1123 G>C and+2740 A>G variants in the association of PTPN22 with type 1 diabetes and juvenile idiopathic arthritis in two Caucasian populations.Q51932778
Haplotype analysis revealed no association between the PTPN22 gene and RA in a Japanese population.Q51941868
The autoimmune disease-associated PTPN22 variant promotes calpain-mediated Lyp/Pep degradation associated with lymphocyte and dendritic cell hyperresponsiveness.Q53225913
The non-synonymous C1858T substitution in the PTPN22 gene is associated with susceptibility to the severe forms of alopecia areata.Q54593087
The PTPN22 R263Q polymorphism is a risk factor for rheumatoid arthritis in Caucasian case-control samplesQ57154867
Evaluation of the genetic association of thePTPN22 R620W polymorphism in familial and sporadic systemic lupus erythematosusQ57329891
The 620W allele is the PTPN22 genetic variant conferring susceptibility to RA in a Dutch populationQ58234945
Perifollicular and Perivascular Mouse Skin Mast Cells Express Corticotropin-Releasing Hormone ReceptorQ58273710
Association of PTPN22 single nucleotide polymorphism with rheumatoid arthritis but not with allergic asthmaQ59697424
Evaluating the role of the genetic variations of PTPN22, NFKB1, and FcGRIIIA genes in inflammatory bowel disease: A meta-analysisQ60023315
The PTPN22 1858T variant is not associated with primary biliary cirrhosisQ61952453
Association analysis of the PTPN22 gene in childhood-onset systemic lupus erythematosus in Mexican populationQ62658780
Association of the PTPN22/LYP gene with type 1 diabetesQ79281980
The PTPN22 promoter polymorphism -1123G>C association cannot be distinguished from the 1858C>T association in a Norwegian rheumatoid arthritis materialQ80697518
PTPN22 R620W polymorphism is not associated with pemphigusQ81248122
Systematic search for single nucleotide polymorphisms in a lymphoid tyrosine phosphatase gene (PTPN22): association between a promoter polymorphism and type 1 diabetes in Asian populationsQ82521460
Association of the PTPN22 gene polymorphism with autoantibody positivity in Turkish rheumatoid arthritis patientsQ83911023
Atherosclerosis and PTPN22: a study in coronary artery diseaseQ84776732
Protein tyrosine phosphatase gene C1858T allele confers risk for rheumatoid arthritis in Hungarian subjectsQ45129416
The codon 620 tryptophan allele of the lymphoid tyrosine phosphatase (LYP) gene is a major determinant of Graves' diseaseQ45142894
The autoimmunity-related polymorphism PTPN22 1858C/T is associated with anti-titin antibody-positive myasthenia gravis.Q46030308
No association of PTPN22 gene polymorphism with rheumatoid arthritis in TurkeyQ46055652
PTPN22/LYP 1858C>T gene polymorphism and susceptibility to endometriosis in a Polish populationQ46112265
PTPN22 allele polymorphisms in 15 Chinese populationsQ46221122
Association analysis of the 1858C>T polymorphism in the PTPN22 gene in juvenile idiopathic arthritis and other autoimmune diseasesQ46368513
Protein tyrosine phosphatase gene (PTPN22) polymorphism in multiple sclerosis.Q46375999
Protein tyrosine phosphatase non-receptor type 22 gene variants at position 1858 are associated with type 1 and type 2 diabetes in Estonian populationQ46396187
No evidence for association between 1858 C/T single-nucleotide polymorphism of PTPN22 gene and primary Sjögren's syndromeQ46525705
Association between the PTPN22 gene and rheumatoid arthritis and juvenile idiopathic arthritis in a UK population: further support that PTPN22 is an autoimmunity geneQ46525978
Lymphoid tyrosine phosphatase (PTPN22/LYP) variant and Graves' disease in a Polish population: association and gene dose-dependent correlation with age of onsetQ46534885
PTPN22 R620W promotes production of anti-AChR autoantibodies and IL-2 in myasthenia gravisQ46557023
Association of the PTPN22 locus with rheumatoid arthritis in a New Zealand Caucasian cohortQ46573581
Variants of CARD15, TNFA and PTPN22 and susceptibility to Crohn's disease in the Czech population: high frequency of the CARD15 1007fs.Q46588293
Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationshipQ34899429
Association of PTPN22 1858T/T genotype with type 1 diabetes, Graves' disease but not with rheumatoid arthritis in Russian population.Q35052064
Association between the PTPN22 +1858 C/T polymorphism and psoriatic arthritisQ35092932
The PTPN22 allele encoding an R620W variant interferes with the removal of developing autoreactive B cells in humansQ35187072
Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility lociQ35575555
Lack of association between the protein tyrosine phosphatase non-receptor 22 (PTPN22)*620W allele and systemic sclerosis in the French Caucasian populationQ35637803
Association of the PTPN22 R620W polymorphism with increased risk for SLE in the genetically homogeneous population of CreteQ35854073
Investigation of genetic variation across the protein tyrosine phosphatase gene in patients with rheumatoid arthritis in the UK.Q35953254
The protein tyrosine phosphatase N22 gene is associated with juvenile and adult idiopathic inflammatory myopathy independent of the HLA 8.1 haplotype in British Caucasian patientsQ36056490
High frequency of autoreactive myelin proteolipid protein-specific T cells in the periphery of naive mice: mechanisms of selection of the self-reactive repertoireQ36376026
The PTPN22 1858C/T polymorphism is associated with anti-cyclic citrullinated peptide antibody-positive early rheumatoid arthritis in northern SwedenQ36392280
Polymorphisms in the PTPN22 region are associated with psoriasis of early onset.Q36590346
Pemphigus vulgaris and its active disease mouse modelQ37156240
Association of common polymorphisms in known susceptibility genes with rheumatoid arthritis in a Slovak population using osteoarthritis patients as controlsQ37270770
Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populationsQ37406567
Association between type 1 diabetes and GWAS SNPs in the southeast US Caucasian populationQ37634958
Analysis of the influence of PTPN22 gene polymorphisms in systemic sclerosisQ38367681
The R620W polymorphism of the protein tyrosine phosphatase 22 gene in autoimmune thyroid diseases and rheumatoid arthritis in the Tunisian populationQ38936485
Association of PTPN22 gene functional variants with development of pulmonary tuberculosis in Moroccan populationQ39158993
No association of PTPN22 R620W gene polymorphism with rheumatic heart disease and systemic lupus erythematosusQ40331696
The PTPN22-1858C>T (R620W) functional polymorphism is associated with generalized vitiligo in the Romanian populationQ42164342
Common and different genetic background for rheumatoid arthritis and coeliac diseaseQ42629408
Effects of PTPN22 C1858T polymorphism on susceptibility and clinical characteristics of British Caucasian rheumatoid arthritis patients.Q42680902
PTPN22 1858C>T polymorphism is strongly associated with rheumatoid arthritis but not with a response to methotrexate therapyQ42871416
The R620W polymorphism of the protein tyrosine phosphatase PTPN22 is not associated with multiple sclerosisQ42949420
Lack of association between ankylosing spondylitis and a functional polymorphism of PTPN22 proposed as a general susceptibility marker for autoimmunityQ42955961
Clinical characteristics and PTPN22 1858C/T variant analysis in Jordanian Arab vitiligo patientsQ43013127
Increased representation of the PTPN22 mutation in patients with immune thrombocytopeniaQ43018677
Genetic risk markers related to diabetes-associated autoantibodies in young patients with type 1 diabetes in berlin, GermanyQ43169308
PTPN22 C1858T polymorphism in women with endometriosisQ43195711
The PTPN22 R620W polymorphism is not associated with systemic rheumatic diseases in South Africans.Q43223025
Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in CroatiansQ43264945
The PTPN22gain-of-function+1858T(+) genotypes correlate with low IL-2 expression in thymomas and predispose to myasthenia gravisQ43289350
Differential association of two PTPN22 coding variants with Crohn's disease and ulcerative colitisQ43687514
PTPN22 1858T is not a risk factor for North American pemphigus vulgarisQ43883963
Finnish case-control and family studies support PTPN22 R620W polymorphism as a risk factor in rheumatoid arthritis, but suggest only minimal or no effect in juvenile idiopathic arthritisQ44449408
The protein tyrosine phosphatase non-receptor type 22 C1858T polymorphism is a joint susceptibility locus for immunthyroiditis and autoimmune diabetesQ44905066
The tryptophan 620 allele of the lymphoid tyrosine phosphatase (PTPN22) gene predisposes to autoimmune Addison's disease.Q44909176
P433issue8
P921main subjectmeta-analysisQ815382
P304page(s)641-652
P577publication date2012-10-18
P1433published inGenes and ImmunityQ15745246
P1476titleMeta-analysis reveals an association of PTPN22 C1858T with autoimmune diseases, which depends on the localization of the affected tissue
P478volume13

Reverse relations

cites work (P2860)
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