Transcriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development

scientific article

Transcriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/JXB/ERN329
P8608Fatcat IDrelease_v7rzktbti5g2dpolpnjgz4ks4u
P932PMC publication ID2652045
P698PubMed publication ID19218315
P5875ResearchGate publication ID24011564

P2093author name stringQing Liu
Jian Ding
Juan Xu
Andan Zhu
Keqin Yu
Xiuxin Deng
Wenjing Zhou
Lijun Chai
P2860cites workCombining SSH and cDNA microarrays for rapid identification of differentially expressed genesQ22008809
Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variationQ27860759
CAP3: A DNA sequence assembly programQ27860964
12-Oxophytodienoate reductase 3 (OPR3) is the isoenzyme involved in jasmonate biosynthesisQ28139398
Chromosome organization and genic expressionQ28244628
Phosphoenolpyruvate carboxykinase in cucumber plants is increased both by ammonium and by acidification, and is present in the phloemQ28247472
Genetic structure and differentiation in cultivated grape, Vitis vinifera LQ73831076
The role of pyruvate dehydrogenase and acetyl-coenzyme A synthetase in fatty acid synthesis in developing Arabidopsis seedsQ73907221
Calcium/Calmodulin Activation of Soybean Glutamate DecarboxylaseQ74781566
The synergistic effects of sugar and abscisic acid on myo-inositol-1-phosphate synthase expressionQ78007955
Retrotransposon-induced mutations in grape skin colorQ80088027
Effect of the Colorless non-ripening mutation on cell wall biochemistry and gene expression during tomato fruit development and ripeningQ81057023
Citrus and Prunuscopia-like retrotransposonsQ84291481
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics researchQ29547461
Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and librariesQ29618999
Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stressQ33197207
Transcriptome analysis of bud burst in sessile oak (Quercus petraea).Q33242876
Identification of early salt stress response genes in tomato root by suppression subtractive hybridization and microarray analysisQ33268616
Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance.Q33270391
Differentially expressed cDNAs at the early stage of banana ripening identified by suppression subtractive hybridization and cDNA microarrayQ33276582
Overexpression of a NAC-domain protein promotes shoot branching in riceQ33299932
Two types of aspartic proteinases from buckwheat seed--gene structure and expression analysisQ33301973
Characterization of Vitis vinifera L. somatic variants exhibiting abnormal flower development patternsQ33344891
A chloroplast lipoxygenase is required for wound-induced jasmonic acid accumulation in ArabidopsisQ33917915
A hierarchical unsupervised growing neural network for clustering gene expression patternsQ33936864
Oranges and lemons: clues to the taxonomy of Citrus from molecular markersQ34088458
Genomic analysis of anti-hepatitis B virus (HBV) activity by small interfering RNA and lamivudine in stable HBV-producing cellsQ34123971
Pummelo fruit transcript homologous to ripening-induced genes.Q34301908
Cloning and functional analysis of the beta-carotene hydroxylase of Arabidopsis thalianaQ34396397
Parthenocarpic apple fruit production conferred by transposon insertion mutations in a MADS-box transcription factor.Q34662655
The lipoxygenase pathway.Q34833694
Naturally occurring genetic variation in Arabidopsis thaliana.Q35891611
NAC transcription factors: structurally distinct, functionally diverseQ36039778
Glyoxysomal malate dehydrogenase and malate synthase from soybean cotyledons (Glycine max L.): enzyme association, antibody production and cDNA cloning.Q36789583
Lipid transfer particle catalyzes transfer of carotenoids between lipophorins of Bombyx moriQ42059377
Accumulation of carotenoids and expression of carotenoid biosynthetic genes during maturation in citrus fruit.Q42617909
An evaluation of the basis and consequences of a stay-green mutation in the navel negra citrus mutant using transcriptomic and proteomic profiling and metabolite analysis.Q43661273
Acute inhibition of glucose-6-phosphate translocator activity leads to increased de novo lipogenesis and development of hepatic steatosis without affecting VLDL production in ratsQ43778806
Identification and genomic distribution of gypsy like retrotransposons in Citrus and PoncirusQ44561135
A grape ASR protein involved in sugar and abscisic acid signalingQ44571752
Annotations and functional analyses of the rice WRKY gene superfamily reveal positive and negative regulators of abscisic acid signaling in aleurone cellsQ45200804
Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.Q46769498
A novel bud mutation that confers abnormal patterns of lycopene accumulation in sweet orange fruit (Citrus sinensis L. Osbeck).Q46817390
Zinc-finger transcription factors in plantsQ47795463
Molecular cloning, immunochemical localization to the vacuole, and expression in transgenic yeast and tobacco of a putative sugar transporter from sugar beet.Q48066537
Genomic nucleotide sequence of tomato Asr2, a second member of the stress/ripening-induced Asr1 gene familyQ48077522
CIRE1, a novel transcriptionally active Ty1-copia retrotransposon from Citrus sinensisQ48082355
A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.Q48086140
Tomato (Lycopersicon esculentum) transcript induced by water deficit and ripeningQ48108516
The diversification of Citrus clementina Hort. ex Tan., a vegetatively propagated crop speciesQ48334237
Two new grape cultivars, bud sports of Cabernet Sauvignon bearing pale-coloured berries, are the result of deletion of two regulatory genes of the berry colour locus.Q50723729
Activation of a recombinant petunia glutamate decarboxylase by calcium/calmodulin or by a monoclonal antibody which recognizes the calmodulin binding domainQ71070583
Biosynthesis of isoprenoids in higher plant chloroplasts proceeds via a mevalonate-independent pathwayQ73014403
Metabolism and functions of gamma-aminobutyric acidQ73102676
P433issue3
P921main subjectCitrusQ81513
transcriptomeQ252857
Citrus sinensisQ3355098
P304page(s)801-813
P577publication date2009-02-13
P1433published inJournal of Experimental BotanyQ6295179
P1476titleTranscriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development
P478volume60

Reverse relations

cites work (P2860)
Q45277293An active hAT transposable element causing bud mutation of carnation by insertion into the flavonoid 3'-hydroxylase gene
Q37666562An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus
Q39780467Characterization of a Citrus R2R3-MYB Transcription Factor that Regulates the Flavonol and Hydroxycinnamic Acid Biosynthesis
Q37073047Citrate Accumulation-Related Gene Expression and/or Enzyme Activity Analysis Combined With Metabolomics Provide a Novel Insight for an Orange Mutant
Q34381688Comparative transcript profiling of gene expression between seedless Ponkan mandarin and its seedy wild type during floral organ development by suppression subtractive hybridization and cDNA microarray
Q36099890Comparative transcriptome analysis reveals a global insight into molecular processes regulating citrate accumulation in sweet orange (Citrus sinensis).
Q35955005Comparative transcriptomics and proteomics analysis of citrus fruit, to improve understanding of the effect of low temperature on maintaining fruit quality during lengthy post-harvest storage
Q30892025Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant
Q37443497Comprehensive insights on how 2,4-dichlorophenoxyacetic acid retards senescence in post-harvest citrus fruits using transcriptomic and proteomic approaches
Q33677816Cytological and molecular characterization of carotenoid accumulation in normal and high-lycopene mutant oranges
Q34455117De novo assembly, characterization and functional annotation of pineapple fruit transcriptome through massively parallel sequencing
Q33557848Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type
Q35996878Genome-Wide Identification of the Transcription Factors Involved in Citrus Fruit Ripening from the Transcriptomes of a Late-Ripening Sweet Orange Mutant and Its Wild Type
Q54255743Integration of metabolomics and subcellular organelle expression microarray to increase understanding the organic acid changes in post-harvest citrus fruit.
Q34960420Next-generation sequencing-based mRNA and microRNA expression profiling analysis revealed pathways involved in the rapid growth of developing culms in Moso bamboo
Q35166989Proteomic and metabolomic analyses provide insight into production of volatile and non-volatile flavor components in mandarin hybrid fruit
Q34162754Reference genes for accurate transcript normalization in citrus genotypes under different experimental conditions
Q41862111Reliable reference genes for normalization of gene expression in cucumber grown under different nitrogen nutrition
Q43134081Transcriptional analysis of sweet orange trees co-infected with 'Candidatus Liberibacter asiaticus' and mild or severe strains of Citrus tristeza virus
Q34279336Transcriptional profiling of genes involved in embryogenic, non-embryogenic calluses and somatic embryogenesis of Valencia sweet orange by SSH-based microarray
Q34122169Transcriptome changes during fruit development and ripening of sweet orange (Citrus sinensis)
Q61804846Transcriptomic analysis of Citrus clementina mandarin fruits maturation reveals a MADS-box transcription factor that might be involved in the regulation of earliness
Q35155521Transcriptomic analysis of differentially expressed genes in an orange-pericarp mutant and wild type in pummelo (Citrus grandis)
Q35940326Unravelling molecular responses to moderate dehydration in harvested fruit of sweet orange (Citrus sinensis L. Osbeck) using a fruit-specific ABA-deficient mutant