Annotations and functional analyses of the rice WRKY gene superfamily reveal positive and negative regulators of abscisic acid signaling in aleurone cells

scientific article published on 23 December 2004

Annotations and functional analyses of the rice WRKY gene superfamily reveal positive and negative regulators of abscisic acid signaling in aleurone cells is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1104/PP.104.054312
P932PMC publication ID548849
P698PubMed publication ID15618416
P5875ResearchGate publication ID8113091

P2093author name stringZhen Xie
Jie Huang
Qingxi J Shen
Xiaolu Zou
Paul Ruas
Daniel Thompson
Zhong-Lin Zhang
P2860cites workA Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)Q22065834
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)Q22065835
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
Modification with SUMO. A role in transcriptional regulationQ24534589
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Genomic sequencingQ24594942
The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activityQ24676822
Full-length messenger RNA sequences greatly improve genome annotationQ24796520
Prediction of complete gene structures in human genomic DNAQ27860780
A heterodimerizing leucine zipper coiled coil system for examining the specificity of a position interactions: amino acids I, V, L, N, A, and K.Q44228058
The transcription factors HvABI5 and HvVP1 are required for the abscisic acid induction of gene expression in barley aleurone cellsQ44267802
The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis.Q44727071
The WRKY70 transcription factor: a node of convergence for jasmonate-mediated and salicylate-mediated signals in plant defenseQ44741714
Aux/IAA proteins contain a potent transcriptional repression domainQ44741717
Characterization of GaWRKY1, a cotton transcription factor that regulates the sesquiterpene synthase gene (+)-delta-cadinene synthase-A.Q44888223
The Arabidopsis basic/helix-loop-helix transcription factor family.Q45933175
The Arabidopsis Abscisic Acid Response Locus ABI4 Encodes an APETALA2 Domain ProteinQ45941698
Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.Q45978074
Differential expression of alpha-amylase genes in germinating rice and barley seeds.Q46007092
Characterization of the rice (Oryza sativa) actin gene familyQ47337923
Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in ArabidopsisQ47803594
A rice WRKY gene encodes a transcriptional repressor of the gibberellin signaling pathway in aleurone cellsQ47869954
Interactions of the developmental regulator ABI3 with proteins identified from developing Arabidopsis seedsQ47873344
Identification and analysis of proteins that interact with the Avena fatua homologue of the maize transcription factor VIVIPAROUS 1.Q47873354
Characterization of a WRKY transcription factor expressed in late torpedo-stage embryos of Solanum chacoenseQ47877281
Characterization of a cDNA encoding a novel DNA-binding protein, SPF1, that recognizes SP8 sequences in the 5' upstream regions of genes coding for sporamin and beta-amylase from sweet potato.Q48079041
Hormone response complex in a novel abscisic acid and cycloheximide-inducible barley gene.Q48092812
TRANSPARENT TESTA GLABRA2, a trichome and seed coat development gene of Arabidopsis, encodes a WRKY transcription factor.Q48296206
A Bayesian framework for the analysis of cospeciationQ52075468
A new member of the Arabidopsis WRKY transcription factor family, AtWRKY6, is associated with both senescence- and defence-related processesQ52127098
A gibberellin response complex in cereal alpha-amylase gene promotersQ52233048
MAP kinase signalling cascade in Arabidopsis innate immunityQ52594626
Comparative Sequence Analysis Reveals Extensive Microcolinearity in the Lateral Suppressor Regions of the Tomato, Arabidopsis, and Capsella GenomesQ63255726
Aleurone nuclear proteins bind to similar elements in the promoter regions of two gibberellin-regulated alpha-amylase genesQ68026308
Speculations on RNA splicingQ70756413
Modular nature of abscisic acid (ABA) response complexes: composite promoter units that are necessary and sufficient for ABA induction of gene expression in barleyQ71431548
Functional dissection of an abscisic acid (ABA)-inducible gene reveals two independent ABA-responsive complexes each containing a G-box and a novel cis-acting elementQ72203316
Pfam: multiple sequence alignments and HMM-profiles of protein domainsQ28256643
Members of a new family of DNA-binding proteins bind to a conserved cis-element in the promoters of alpha-Amy2 genesQ28271958
Characterization of three rice basic/leucine zipper factors, including two inhibitors of EmBP-1 DNA binding activityQ28298102
Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expressionQ28343758
14-3-3 Proteins Are Part of an Abscisic Acid–VIVIPAROUS1 (VP1) Response Complex in the Em Promoter and Interact with VP1 and EmBP1Q28611294
Nuclear and unclear functions of SUMOQ29903594
Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factorsQ30763480
ABFs, a family of ABA-responsive element binding factorsQ30832989
Identification of rice blast fungal elicitor-responsive genes by differential display analysisQ30855608
A potato gene encoding a WRKY-like transcription factor is induced in interactions with Erwinia carotovora subsp. atroseptica and Phytophthora infestans and is coregulated with class I endochitinase expressionQ30948407
Cloning and characterization of a thermal hysteresis (antifreeze) protein with DNA-binding activity from winter bittersweet nightshade, Solanum dulcamaraQ31043774
The leucine zipper symmetrically positions the adjacent basic regions for specific DNA bindingQ33361122
The WRKY superfamily of plant transcription factors.Q33901053
Photoregulation of a phytochrome gene promoter from oat transferred into rice by particle bombardmentQ34324722
Sequence determinants in hypoxia-inducible factor-1alpha for hydroxylation by the prolyl hydroxylases PHD1, PHD2, and PHD3.Q35688102
The coactivator LXXLL nuclear receptor recognition motif.Q35721024
WRKY transcription factors: from DNA binding towards biological functionQ35874374
Abscisic acid and water-stress induce the expression of a novel rice gene.Q36062557
A bZIP factor, TRAB1, interacts with VP1 and mediates abscisic acid-induced transcriptionQ36788373
Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor upon woundingQ38314095
Stimulus-dependent, promoter-specific binding of transcription factor WRKY1 to Its native promoter and the defense-related gene PcPR1-1 in Parsley.Q38336709
A novel WRKY transcription factor, SUSIBA2, participates in sugar signaling in barley by binding to the sugar-responsive elements of the iso1 promoterQ38350841
Expression profiles of the Arabidopsis WRKY gene superfamily during plant defense responseQ38357358
Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signalingQ38856598
Molecular and biochemical mechanisms associated with dormancy and drought tolerance in the desert legume Retama raetamQ39360857
The combined effect of drought stress and heat shock on gene expression in tobacco.Q39400932
Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarrayQ39444664
Characterization of a zinc-dependent transcriptional activator from ArabidopsisQ39718339
Targets of AtWRKY6 regulation during plant senescence and pathogen defense.Q39859601
Isolation and characterization of two pathogen- and salicylic acid-induced genes encoding WRKY DNA-binding proteins from tobaccoQ40766829
The Arabidopsis abscisic acid response gene ABI5 encodes a basic leucine zipper transcription factorQ41729659
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica riceQ42603925
Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stressesQ42931443
Identification of a transcription factor specifically expressed at the onset of leaf senescenceQ43708003
Potentiation of developmentally regulated plant defense response by AtWRKY18, a pathogen-induced Arabidopsis transcription factorQ44030505
Three types of defense-responsive genes are involved in resistance to bacterial blight and fungal blast diseases in riceQ44088299
Maize ABI4 binds coupling element1 in abscisic acid and sugar response genesQ44170755
P433issue1
P407language of work or nameEnglishQ1860
P1104number of pages14
P304page(s)176-189
P577publication date2004-12-23
P1433published inPlant PhysiologyQ3906288
P1476titleAnnotations and functional analyses of the rice WRKY gene superfamily reveal positive and negative regulators of abscisic acid signaling in aleurone cells
P478volume137

Reverse relations

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