Assessment of genotype imputation methods

scientific article

Assessment of genotype imputation methods is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1039019316
P356DOI10.1186/1753-6561-3-S7-S5
P932PMC publication ID2795949
P698PubMed publication ID20018042
P5875ResearchGate publication ID40695408

P50authorMariza de AndradeQ42067404
Kari G RabeQ56885267
Shannon K McDonnellQ56953402
Brooke L FridleyQ86514651
Joanna M BiernackaQ87669965
Ellen L GoodeQ88243694
Jason P SinnwellQ100957801
P2093author name stringJia Li
Rui Tang
David N Rider
P2860cites workReplication of putative candidate-gene associations with rheumatoid arthritis in >4,000 samples from North America and Sweden: association of susceptibility with PTPN22, CTLA4, and PADI4Q24538382
A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phaseQ24542357
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritisQ28267921
A new multipoint method for genome-wide association studies by imputation of genotypesQ29547209
Imputation-based analysis of association studies: candidate regions and quantitative traitsQ30833155
Analyses and comparison of accuracy of different genotype imputation methodsQ33380176
Single versus multiple imputation for genotypic data.Q33519363
PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritisQ34114509
A comprehensive evaluation of SNP genotype imputationQ34906095
Association of PADI4 and rheumatoid arthritis: a successful multidisciplinary approachQ35558665
Testing untyped alleles (TUNA)-applications to genome-wide association studies.Q51933120
P921main subjectimputationQ1660484
P304page(s)S5
P577publication date2009-12-15
P1433published inBMC ProceedingsQ27721520
P1476titleAssessment of genotype imputation methods
P478volume3 Suppl 7

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cites work (P2860)
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Q37565142Associations between smoking behavior-related alleles and the risk of melanoma
Q21145310Chapter 11: Genome-wide association studies
Q35742524Exonuclease 1 (EXO1) gene variation and melanoma risk
Q58896028Factors Affecting the Accuracy of Genotype Imputation in Populations from Several Maize Breeding Programs
Q38788784Genetic Variants in WNT2B and BTRC Predict Melanoma Survival
Q34750415Genetic association analysis and meta-analysis of imputed SNPs in longitudinal studies
Q47177866Genetic variants in RORA and DNMT1 associated with cutaneous melanoma survival
Q37616075Genetic variants in the PIWI-piRNA pathway gene DCP1A predict melanoma disease-specific survival
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Q37611428Genetic variants in the vitamin D pathway genes VDBP and RXRA modulate cutaneous melanoma disease-specific survival
Q34062980Genome-wide association studies for discrete traits
Q100316525Haplotype-resolved genome analyses of a heterozygous diploid potato
Q29417013Identification of a melanoma susceptibility locus and somatic mutation in TET2.
Q24635938MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes
Q34253355Merging pharmacometabolomics with pharmacogenomics using '1000 Genomes' single-nucleotide polymorphism imputation: selective serotonin reuptake inhibitor response pharmacogenomics
Q26748481Pharmacometabolomics-aided Pharmacogenomics in Autoimmune Disease
Q33519363Single versus multiple imputation for genotypic data.
Q37120242The importance of phase information for human genomics

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