ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus ).

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ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus ). is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1011278845
P356DOI10.1186/1471-2148-9-300
P932PMC publication ID2810301
P698PubMed publication ID20035628
P5875ResearchGate publication ID40784382

P50authorMartin WiemersQ21340879
Matthias WolfQ21503090
Alexander KellerQ21517397
P2860cites workDoes the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae)Q21231986
DNA barcoding: error rates based on comprehensive samplingQ21563625
DNA barcoding: promise and pitfallsQ21563636
Utility of GenBank and the Barcode of Life Data Systems (BOLD) for the identification of forensically important Diptera from Belgium and FranceQ22679880
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structureQ24562398
Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgeratorQ24563732
Biological identifications through DNA barcodesQ24669741
4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editingQ24671878
Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related speciesQ24673120
Defining operational taxonomic units using DNA barcode dataQ24673720
Accurate and robust phylogeny estimation based on profile distances: a study of the Chlorophyceae (Chlorophyta)Q24801596
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0Q26778434
MODELTEST: testing the model of DNA substitutionQ26778437
TCS: a computer program to estimate gene genealogiesQ27860935
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotationQ28269158
Reinforcement of pre-zygotic isolation and karyotype evolution in Agrodiaetus butterfliesQ29037459
Hybridization and adaptive radiationQ29615092
The unholy trinity: taxonomy, species delimitation and DNA barcodingQ29615349
Ribosomal ITS sequences and plant phylogenetic inferenceQ29616340
Intragenomic variation within ITS1 and ITS2 of freshwater crayfishes (Decapoda: Cambaridae): implications for phylogenetic and microsatellite studies.Q30163749
ITS2 data corroborate a monophyletic chlorophycean DO-group (Sphaeropleales).Q31165146
Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE.Q33375848
The current state of insect molecular systematics: a thriving Tower of BabelQ33889650
DNA barcoding Central Asian butterflies: increasing geographical dimension does not significantly reduce the success of species identificationQ33897003
Progress towards DNA barcoding of fungiQ33897158
ITS2 is a double-edged tool for eukaryote evolutionary comparisonsQ34212694
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the EukaryotaQ34366269
The perils of DNA barcoding and the need for integrative taxonomyQ34462023
Ribosomal DNA in the grasshopper Podisma pedestris: escape from concerted evolutionQ34570559
Genomic outposts serve the phylogenomic pioneers: designing novel nuclear markers for genomic DNA extractions of lepidopteraQ34590251
Sex chromosomes and sex determination in LepidopteraQ34768110
Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plantsQ36769588
Pan-eukaryote ITS2 homologies revealed by RNA secondary structureQ36801991
Ancient rapid radiations of insects: challenges for phylogenetic analysisQ36945035
Four years of DNA barcoding: current advances and prospectsQ37198134
Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guideQ37321129
ITS2 sequence-structure analysis in phylogenetics: a how-to manual for molecular systematicsQ37504906
The internal transcribed spacer 2 database--a web server for (not only) low level phylogenetic analysesQ41816201
Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structuresQ41987599
Introgression as a likely cause of mtDNA paraphyly in two allopatric skippers (Lepidoptera: Hesperiidae).Q42025924
Karyotypic diversity and speciation in Agrodiaetus butterfliesQ42034202
Phylogeny of Agrodiaetus Hübner 1822 (Lepidoptera: Lycaenidae) inferred from mtDNA sequences of COI and COII and nuclear sequences of EF1-alpha: karyotype diversification and species radiation.Q42044426
Principles of the highly ordered arrangement of metaphase I bivalents in spermatocytes of Agrodiaetus (Insecta, Lepidoptera).Q42052227
Distinguishing speciesQ42216491
Testing the utility of internally transcribed spacer sequences in coral phylogeneticsQ42633728
The ITS2 Database II: homology modelling RNA structure for molecular systematicsQ43032989
Barcoding diatoms: Is there a good marker?Q45478039
ProfDistS: (profile-) distance based phylogeny on sequence--structure alignmentsQ46731521
5.8S-28S rRNA interaction and HMM-based ITS2 annotationQ48072223
CBCAnalyzer: inferring phylogenies based on compensatory base changes in RNA secondary structures.Q48604690
DNA barcoding: perspectives from a "Partnerships for Enhancing Expertise in Taxonomy" (PEET) debateQ48707025
Role of photonic-crystal-type structures in the thermal regulation of a Lycaenid butterfly sister species pair.Q50495463
How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets.Q52001679
ProfDist: a tool for the construction of large phylogenetic trees based on profile distancesQ56993732
Gene trees and species trees are not the sameQ62898751
P921main subjectLepidopteraQ28319
phylogeneticsQ171184
LycaenidaeQ158717
P304page(s)300
P577publication date2009-12-26
P1433published inBMC Evolutionary BiologyQ13418959
P1476titleITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus ).
P478volume9

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