Discovery of Phytophthora infestans genes expressed in planta through mining of cDNA libraries

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Discovery of Phytophthora infestans genes expressed in planta through mining of cDNA libraries is …
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scholarly articleQ13442814

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P819ADS bibcode2010PLoSO...5.9847S
P356DOI10.1371/JOURNAL.PONE.0009847
P8608Fatcat IDrelease_ly2r3wpjlvanjedqt74nkmljri
P932PMC publication ID2844423
P698PubMed publication ID20352100
P5875ResearchGate publication ID42639954

P50authorAlejandro GrajalesQ50533971
Silvia RestrepoQ37379827
Roberto SierraQ41050961
Luis Miguel Rodríguez-RQ41050974
P2093author name stringAdriana Bernal
Andrés Pinzón
Alejandro Rojas
Martha Cárdenas
Pedro Jiménez
Diego Chaves
Daniel Burbano
Gabriel Mutis
P2860cites workGenome sequence and analysis of the Irish potato famine pathogen Phytophthora infestansQ22122205
A translocation signal for delivery of oomycete effector proteins into host plant cellsQ46968391
Trafficking arms: oomycete effectors enter host plant cellsQ48021118
The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana.Q48035323
Differential gene expression in two potato lines differing in their resistance to Phytophthora infestansQ48236039
Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes.Q51909008
Combined ESTs from plant-microbe interactions: using GC counting to determine the species of originQ63975712
A fast and symmetric DUST implementation to mask low-complexity DNA sequencesQ79779829
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Basic local alignment search toolQ25938991
EMBOSS: the European Molecular Biology Open Software SuiteQ27860491
Improved prediction of signal peptides: SignalP 3.0Q27860548
CAP3: A DNA sequence assembly programQ27860964
Circos: an information aesthetic for comparative genomicsQ29547653
AmiGO: online access to ontology and annotation dataQ29616191
The universal protein resource (UniProt)Q29617074
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasetsQ29618029
Comparative analyses of potato expressed sequence tag librariesQ30886841
Large-scale gene discovery in the oomycete Phytophthora infestans reveals likely components of phytopathogenicity shared with true fungiQ31155104
Potato expressed sequence tag generation and analysis using standard and unique cDNA libraries.Q33225502
The malarial host-targeting signal is conserved in the Irish potato famine pathogenQ33245074
Screening and expression analysis of Phytophthora infestans induced genes in potato leaves with horizontal resistance.Q33245348
Phytophthora infestans-triggered response of growth- and defense-related genes in potato cultivars with different levels of resistance under the influence of nitrogen availabilityQ33320206
Effector genomics accelerates discovery and functional profiling of potato disease resistance and phytophthora infestans avirulence genesQ33358150
EDGAR: a software framework for the comparative analysis of prokaryotic genomesQ33449008
In planta expression screens of Phytophthora infestans RXLR effectors reveal diverse phenotypes, including activation of the Solanum bulbocastanum disease resistance protein Rpi-blb2.Q33507768
Analysis of differentially expressed genes in a susceptible and moderately resistant potato cultivar upon Phytophthora infestans infectionQ33610658
Identification of potato genes induced during colonization by Phytophthora infestansQ33614070
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasmQ33836262
A catalogue of the effector secretome of plant pathogenic oomycetesQ36382600
RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 membersQ36534493
Groovy times: filamentous pathogen effectors revealedQ36870373
RXLR effectors of plant pathogenic oomycetesQ36914017
Ten things to know about oomycete effectors.Q37619690
EST mining and functional expression assays identify extracellular effector proteins from the plant pathogen PhytophthoraQ40830214
Comparative cDNA-AFLP analysis reveals that DL-beta-amino-butyric acid induces resistance through early activation of the host-defense genes in potatoQ42455099
The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector.Q42599689
Computational and comparative analyses of 150 full-length cDNA sequences from the oomycete plant pathogen Phytophthora infestansQ42676787
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome.Q46103763
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectPhytophthora infestansQ149072
P304page(s)e9847
P577publication date2010-03-24
P1433published inPLOS OneQ564954
P1476titleDiscovery of Phytophthora infestans genes expressed in planta through mining of cDNA libraries
P478volume5

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cites work (P2860)
Q40422568Degradation of Benzene by Pseudomonas veronii 1YdBTEX2 and 1YB2 Is Catalyzed by Enzymes Encoded in Distinct Catabolism Gene Clusters
Q33900457Identification of Hyaloperonospora arabidopsidis transcript sequences expressed during infection reveals isolate-specific effectors
Q34046328Transcriptomic analysis of the interaction between Helianthus annuus and its obligate parasite Plasmopara halstedii shows single nucleotide polymorphisms in CRN sequences
Q34251233mRNA-Seq analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection

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