Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner

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Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKW1289
P932PMC publication ID5397155
P698PubMed publication ID28003477

P50authorJean-Paul ConcordetQ56650883
Jean-Christophe PaillartQ57015582
Sarah Gallois-MontbrunQ57651305
Jean-François ZaguryQ64750696
P2093author name stringStéphane Emiliani
Clarisse Berlioz-Torrent
Sabine Nidelet
Hervé Seitz
Damien Ulveling
Emmanuel Ségéral
Céline Amadori
Agathe Eckenfelder
Marine Charpentier
Natalia Pinzón
P2860cites workIdentification of novel argonaute-associated proteinsQ24295156
HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodiesQ24297395
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cellsQ24297443
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Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoterQ24632822
MicroRNA-373 induces expression of genes with complementary promoter sequencesQ24652547
Changes in microRNA expression profiles in HIV-1-transfected human cellsQ25257532
Human cellular microRNA hsa-miR-29a interferes with viral nef protein expression and HIV-1 replicationQ27497968
Switching from repression to activation: microRNAs can up-regulate translationQ28131790
A genome-wide short hairpin RNA screening of jurkat T-cells for human proteins contributing to productive HIV-1 replicationQ28245811
Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cellsQ28260424
CLIP: a method for identifying protein-RNA interaction sites in living cellsQ28284054
Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cellsQ28533855
Site identification in high-throughput RNA-protein interaction dataQ30528777
Ago2 facilitates Rad51 recruitment and DNA double-strand break repair by homologous recombinationQ33571344
Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cellsQ33652889
Replication of many human viruses is refractory to inhibition by endogenous cellular microRNAsQ33900325
High-throughput functional microRNAs profiling by recombinant AAV-based microRNA sensor arraysQ34126628
Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cellsQ34212555
HIV-1 Gag co-opts a cellular complex containing DDX6, a helicase that facilitates capsid assemblyQ34291663
Excessive RNA Splicing and Inhibition of HIV-1 Replication Induced by Modified U1 Small Nuclear RNAsQ34416441
Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cellsQ34480743
Cellular microRNAs contribute to HIV-1 latency in resting primary CD4+ T lymphocytesQ34695803
Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs.Q34803039
Posttranscriptional activation of gene expression in Xenopus laevis oocytes by microRNA-protein complexes (microRNPs).Q35002740
Hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) dataQ35037872
Improved vectors and genome-wide libraries for CRISPR screeningQ35215629
Intramolecular circularization increases efficiency of RNA sequencing and enables CLIP-Seq of nuclear RNA from human cellsQ35587942
Retroviral GAG proteins recruit AGO2 on viral RNAs without affecting RNA accumulation and translationQ35672257
HIV-1 RNAs are Not Part of the Argonaute 2 Associated RNA Interference Pathway in MacrophagesQ35726813
Tiling genomes of pathogenic viruses identifies potent antiviral shRNAs and reveals a role for secondary structure in shRNA efficacyQ35734891
Reduced Expression of Argonaute 1, Argonaute 2, and TRBP Changes Levels and Intracellular Distribution of RNAi FactorsQ35917720
Association of Argonaute proteins and microRNAs can occur after cell lysisQ36183557
Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing.Q36368754
Gag-processing defect of human immunodeficiency virus type 1 integrase E246 and G247 mutants is caused by activation of an overlapping 5' splice siteQ36424150
MicroRNAs and HIV-1: complex interactionsQ36435987
Therapeutic potential of siRNA-mediated transcriptional gene silencing.Q36455682
Heritable gene targeting in zebrafish using customized TALENs.Q55054727
Poly(A) site selection in the HIV-1 provirus: inhibition of promoter-proximal polyadenylation by the downstream major splice donor siteQ71584691
Next-generation sequencing of small RNAs from HIV-infected cells identifies phased microrna expression patterns and candidate novel microRNAs differentially expressed upon infectionQ36576661
Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity.Q36654112
In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.Q36790808
Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAsQ36990752
Role of cellular RNA processing factors in human immunodeficiency virus type 1 mRNA metabolism, replication, and infectivityQ37033364
MicroRNA profile changes in human immunodeficiency virus type 1 (HIV-1) seropositive individualsQ37102282
Suppression of HIV-1 replication by microRNA effectorsQ37133970
Cellular microRNA and P bodies modulate host-HIV-1 interactionsQ37391014
Chapter 1. Regulation of HIV-1 alternative RNA splicing and its role in virus replicationQ37584186
Alternative splicing: regulation of HIV-1 multiplication as a target for therapeutic actionQ37677066
Argonaute proteins: functional insights and emerging rolesQ38111603
Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression.Q39197800
Problems associated with reporter assays in RNAi studiesQ39823252
Suppression of microRNA-silencing pathway by HIV-1 during virus replicationQ40166750
Dicer-dependent and -independent Argonaute2 protein interaction networks in mammalian cellsQ41295834
Deep sequencing of virus-infected cells reveals HIV-encoded small RNAsQ42118138
Argonaute proteins couple chromatin silencing to alternative splicing.Q45345567
A role for small RNAs in DNA double-strand break repair.Q45345570
Control of alternative splicing through siRNA-mediated transcriptional gene silencing.Q45960034
P275copyright licenseCreative Commons Attribution-NonCommercial 4.0 InternationalQ34179348
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)4158-4173
P577publication date2016-12-20
P1433published inNucleic Acids ResearchQ135122
P1476titleArgonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner
P478volume45

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cites work (P2860)
Q52671487Are microRNAs Important Players in HIV-1 Infection? An Update.
Q95817429Argonaute proteins: Structural features, functions and emerging roles
Q58705241Comprehensive Evolutionary Analysis of the Major RNA-Induced Silencing Complex Members
Q61442961Methamphetamine functions as a novel CD4 T-cell activator via the sigma-1 receptor to enhance HIV-1 infection