Analysis of variable (diversity) joining recombination in DNAdependent protein kinase (DNA-PK)-deficient mice reveals DNA-PK-independent pathways for both signal and coding joint formation

scientific article

Analysis of variable (diversity) joining recombination in DNAdependent protein kinase (DNA-PK)-deficient mice reveals DNA-PK-independent pathways for both signal and coding joint formation is …
instance of (P31):
scholarly articleQ13442814

External links are
P819ADS bibcode1998PNAS...9515559B
P356DOI10.1073/PNAS.95.26.15559
P932PMC publication ID28082
P698PubMed publication ID9861008
P5875ResearchGate publication ID13426823

P2093author name stringD B Roth
M A Bogue
C Jhappan
P2860cites workDNA end-joining catalyzed by human cell-free extractsQ22008041
Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cellsQ24320116
Mammalian DNA double-strand break repair protein XRCC4 interacts with DNA ligase IVQ24323238
DNA-PK is essential only for coding joint formation in V(D)J recombinationQ39724861
DNA breakage and repairQ40849877
DNA-dependent protein kinase acts upstream of p53 in response to DNA damageQ41013003
Ku70: a candidate tumor suppressor gene for murine T cell lymphomaQ41017020
Murine cell line SX9 bearing a mutation in the dna-pkcs gene exhibits aberrant V(D)J recombination not only in the coding joint but also in the signal jointQ41040365
A kinase-negative mutation of DNA-PK(CS) in equine SCID results in defective coding and signal joint formationQ41116024
Characterization of two DNA double-stranded break repair-deficient cell lines that express inactive DNA-dependent protein kinase catalytic subunitsQ41116291
An ionizing radiation-sensitive CHO mutant cell line: irs-20. IV. Genetic complementation, V(D)J recombination and the scid phenotypeQ41131832
Absence of p350 subunit of DNA-activated protein kinase from a radiosensitive human cell lineQ41368190
Recent advances in understanding V(D)J recombination.Q41430421
V(D)J recombination in mammalian cell mutants defective in DNA double-strand break repairQ41549015
Impairment of V(D)J recombination in double-strand break repair mutantsQ41560292
V(D)J recombination generates a high frequency of nonstandard TCR D delta-associated rearrangements in thymocytes.Q42615873
DNA-PKcs: a T-cell tumour suppressor encoded at the mouse scid locusQ42833970
The scid defect affects the final step of the immunoglobulin VDJ recombinase mechanismQ44009684
Telomere maintenance is dependent on activities required for end repair of double-strand breaksQ47946099
The defect in murine severe combined immune deficiency: joining of signal sequences but not coding segments in V(D)J recombinationQ48313594
Rejoining of DNA by the RAG1 and RAG2 proteinsQ49172612
Growth retardation and leaky SCID phenotype of Ku70-deficient mice.Q52191949
Rearrangement of antigen receptor genes is defective in mice with severe combined immune deficiency.Q53534567
The scid mutation in mice causes a general defect in DNA repairQ59073681
V(D)J recombination in mouse thymocytes: Double-strand breaks near T cell receptor δ rearrangement signalsQ64389915
V(D)J recombination: broken DNA molecules with covalently sealed (hairpin) coding ends in scid mouse thymocytesQ67521111
T-lymphocyte development in scid mice is arrested shortly after the initiation of T-cell receptor delta gene recombinationQ67940431
p53 is required for both radiation-induced differentiation and rescue of V(D)J rearrangement in scid mouse thymocytesQ70993632
Characterization of coding ends in thymocytes of scid mice: Implications for the mechanism of V(D)J recombinationQ71843533
V(D)J recombination in Ku86-deficient mice: distinct effects on coding, signal, and hybrid joint formationQ73574910
A targeted DNA-PKcs-null mutation reveals DNA-PK-independent functions for KU in V(D)J recombinationQ77398644
Saccharomyces cerevisiae LIF1: a function involved in DNA double-strand break repair related to mammalian XRCC4.Q27938296
Ku70-deficient embryonic stem cells have increased ionizing radiosensitivity, defective DNA end-binding activity, and inability to support V(D)J recombinationQ28243620
The XRCC4 gene encodes a novel protein involved in DNA double-strand break repair and V(D)J recombinationQ28272412
A severe combined immunodeficiency mutation in the mouseQ28274531
RAG1 and RAG2 form a stable postcleavage synaptic complex with DNA containing signal ends in V(D)J recombinationQ28307236
DNA-dependent kinase (p350) as a candidate gene for the murine SCID defectQ28307262
Targeted disruption of the catalytic subunit of the DNA-PK gene in mice confers severe combined immunodeficiency and radiosensitivityQ28506163
Interaction of Ku protein and DNA-dependent protein kinase catalytic subunit with nucleic acidsQ28608946
The DNA-binding protein Hdf1p (a putative Ku homologue) is required for maintaining normal telomere length in Saccharomyces cerevisiaeQ29465403
Molecular and biochemical characterisation of DNA-dependent protein kinase-defective rodent mutant irs-20Q32082716
Equine severe combined immunodeficiency: a defect in V(D)J recombination and DNA-dependent protein kinase activity.Q33702830
Interaction of DNA-dependent protein kinase with DNA and with Ku: biochemical and atomic-force microscopy studiesQ33887333
Ku protein stimulates DNA end joining by mammalian DNA ligases: a direct role for Ku in repair of DNA double-strand breaksQ33888149
Defective DNA-dependent protein kinase activity is linked to V(D)J recombination and DNA repair defects associated with the murine scid mutation.Q34320792
Identification of a Saccharomyces cerevisiae Ku80 homologue: roles in DNA double strand break rejoining and in telomeric maintenanceQ34411525
Loss of the catalytic subunit of the DNA-dependent protein kinase in DNA double-strand-break-repair mutant mammalian cellsQ34419609
XR-C1, a new CHO cell mutant which is defective in DNA-PKcs, is impaired in both V(D)J coding and signal joint formationQ34669732
Enhancer control of V(D)J recombination at the TCRbeta locus: differential effects on DNA cleavage and joiningQ35206945
DNA-dependent protein kinase: DNA binding and activation in the absence of KuQ35739034
Oligonucleotide capture during end joining in mammalian cellsQ35887410
Nonsense mutation at Tyr-4046 in the DNA-dependent protein kinase catalytic subunit of severe combined immune deficiency miceQ36044979
Ku70 is required for DNA repair but not for T cell antigen receptor gene recombination In vivoQ36380622
scid cells are deficient in Ku and replication protein A phosphorylation by the DNA-dependent protein kinaseQ36555430
Biochemical and genetic defects in the DNA-dependent protein kinase in murine scid lymphocytesQ36562716
Ku86 is not required for protection of signal ends or for formation of nonstandard V(D)J recombination productsQ36567784
Biased T-cell receptor delta element recombination in scid thymocytesQ36686717
Identification of a nonsense mutation in the carboxyl-terminal region of DNA-dependent protein kinase catalytic subunit in the scid mouseQ36820879
The SCID mouse mutant: definition, characterization, and potential usesQ37357870
scid mutation in mice confers hypersensitivity to ionizing radiation and a deficiency in DNA double-strand break repairQ37404182
A link between double-strand break-related repair and V(D)J recombination: the scid mutationQ37508055
V(D)J recombination intermediates and non-standard products in XRCC4-deficient cellsQ38335020
A stable RAG1-RAG2-DNA complex that is active in V(D)J cleavageQ38349361
Ku86-deficient mice exhibit severe combined immunodeficiency and defective processing of V(D)J recombination intermediatesQ38354165
Requirement for Ku80 in growth and immunoglobulin V(D)J recombinationQ38354221
P433issue26
P407language of work or nameEnglishQ1860
P1104number of pages6
P304page(s)15559-15564
P577publication date1998-12-01
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleAnalysis of variable (diversity) joining recombination in DNAdependent protein kinase (DNA-PK)-deficient mice reveals DNA-PK-independent pathways for both signal and coding joint formation
P478volume95

Reverse relations

cites work (P2860)
Q42146685A hypomorphic Artemis human disease allele causes aberrant chromosomal rearrangements and tumorigenesis
Q40855966A new X-ray sensitive CHO cell mutant of ionizing radiation group 7,XR-C2, that is defective in DSB repair but has only a mild defect in V(D)J recombination.
Q34805011Aberrant V(D)J recombination in ataxia telangiectasia mutated-deficient lymphocytes is dependent on nonhomologous DNA end joining.
Q33965750Activation of V(D)J recombination induces the formation of interlocus joints and hybrid joints in scid pre-B-cell lines
Q34550115Ataxia telangiectasia mutated (Atm) and DNA-PKcs kinases have overlapping activities during chromosomal signal joint formation
Q27919641Autophosphorylation of the catalytic subunit of the DNA-dependent protein kinase is required for efficient end processing during DNA double-strand break repair
Q37063328DNA damage and repair during lymphoid development: antigen receptor diversity, genomic integrity and lymphomagenesis
Q36371923DNA-dependent protein kinase activity is not required for immunoglobulin class switching
Q38077808DNA-dependent protein kinase and its inhibition in support of radiotherapy
Q58591000Deciphering phenotypic variance in different models of DNA-PKcs deficiency
Q35054512Effect of DNA-dependent protein kinase on the molecular fate of the rAAV2 genome in skeletal muscle
Q96135452Effects of the scid mutation on X-ray-induced deletions in the brain and spleen of gpt delta mice
Q36845675Evolution of the immunoglobulin heavy chain class switch recombination mechanism
Q51829783Healing the wounds inflicted by sleeping beauty transposition by double-strand break repair in mammalian somatic cells.
Q32067274How to make ends meet in V(D)J recombination
Q77995587IgH class switch recombination to IgG1 in DNA-PKcs-deficient B cells
Q52107361In vivo ligation of CD3 on neonatal scid thymocytes blocks gamma-irradiation-induced TCRbeta rearrangements and thymic lymphomagenesis.
Q40758604Increased accumulation of hybrid V(D)J joins in cells expressing truncated versus full-length RAGs.
Q33966818Irradiation promotes V(D)J joining and RAG-dependent neoplastic transformation in SCID T-cell precursors
Q73427951Joining-deficient RAG1 mutants block V(D)J recombination in vivo and hairpin opening in vitro
Q24554252Ku recruits the XRCC4-ligase IV complex to DNA ends
Q28137885Ku, a DNA repair protein with multiple cellular functions?
Q24527652Ku86 autoantigen related protein-1 transcription initiates from a CpG island and is induced by p53 through a nearby p53 response element
Q33894543Ku86 is essential in human somatic cells
Q36037736Mechanism and control of V(D)J recombination versus class switch recombination: similarities and differences
Q44982147Non-homologous end joining requires that the DNA-PK complex undergo an autophosphorylation-dependent rearrangement at DNA ends.
Q47677812Paradigm switching in the germinal center.
Q48215784Paradoxical decrease in mutant frequencies and chromosomal rearrangements in a transgenic lacZ reporter gene in Ku80 null mice deficient in DNA double strand break repair
Q33558920RAG2's acidic hinge restricts repair-pathway choice and promotes genomic stability
Q34181022Regulation of telomere length and suppression of genomic instability in human somatic cells by Ku86
Q36706287Restoration of ATM Expression in DNA-PKcs-Deficient Cells Inhibits Signal End Joining
Q34048809Role of poly(ADP-ribosyl)ation in DNA-PKcs- independent V(D)J recombination.
Q37246230Roles for NBS1 in alternative nonhomologous end-joining of V(D)J recombination intermediates.
Q35005088Sensing of intermediates in V(D)J recombination by ATM.
Q38320880Signal joint formation is inhibited in murine scid preB cells and fibroblasts in substrates with homopolymeric coding ends.
Q41159581Specific Roles of XRCC4 Paralogs PAXX and XLF during V(D)J Recombination.
Q52109680The RAG-1/2 endonuclease causes genomic instability and controls CNS complications of lymphoblastic leukemia in p53/Prkdc-deficient mice.
Q38690281The Role of the Core Non-Homologous End Joining Factors in Carcinogenesis and Cancer
Q28115800The catalytic subunit of DNA-dependent protein kinase regulates proliferation, telomere length, and genomic stability in human somatic cells
Q35669767The catalytic subunit of DNA-protein kinase (DNA-PKcs) is not required for Ig class-switch recombination
Q35980970The life and death of DNA-PK.
Q33963869The p53 response to DNA damage in vivo is independent of DNA-dependent protein kinase
Q35159001Unique and redundant functions of ATM and DNA-PKcs during V(D)J recombination
Q35830443V(D)J recombination: how to tame a transposase
Q34170658V(D)J recombination: links to transposition and double-strand break repair.
Q34170672What prevents intermolecular V(D)J recombination?
Q24630098XRCC4's interaction with XLF is required for coding (but not signal) end joining

Search more.