Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4)

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Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4) is …
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scholarly articleQ13442814

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P356DOI10.1128/JB.182.15.4165-4172.2000
P932PMC publication ID101896
P698PubMed publication ID10894723

P2093author name stringA J Zehnder
J R van der Meer
C M Laemmli
J H Leveau
P2860cites workPurification and characterization of dichloromuconate cycloisomerase from Alcaligenes eutrophus JMP 134Q24527355
Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes eutrophus JMP134Q24670235
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4Q25938983
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genesQ27860623
Bacterial metabolism of 2,4-dichlorophenoxyacetateQ28364863
How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae?Q32064330
Role of tfdC(I)D(I)E(I)F(I) and tfdD(II)C(II)E(II)F(II) gene modules in catabolism of 3-chlorobenzoate by Ralstonia eutropha JMP134(pJP4).Q33986964
2,4-Dichlorophenoxyacetic acid-degrading bacteria contain mosaics of catabolic genes.Q35185634
Regulation of tfdCDEF by tfdR of the 2,4-dichlorophenoxyacetic acid degradation plasmid pJP4Q36161894
Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4Q36161998
Genetic and physical map of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pJP4.Q36290082
Properties of six pesticide degradation plasmids isolated from Alcaligenes paradoxus and Alcaligenes eutrophusQ36321238
Evolutionary relationship between chlorocatechol catabolic enzymes from Rhodococcus opacus 1CP and their counterparts in proteobacteria: sequence divergence and functional convergence.Q39564783
The tfdK gene product facilitates uptake of 2,4-dichlorophenoxyacetate by Ralstonia eutropha JMP134(pJP4)Q39565643
Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changesQ39842091
The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)Q39843605
Identification and characterization of a new plasmid carrying genes for degradation of 2,4-dichlorophenoxyacetate from Pseudomonas cepacia CSV90.Q39913932
Alcaligenes eutrophus JMP134 "2,4-dichlorophenoxyacetate monooxygenase" is an alpha-ketoglutarate-dependent dioxygenaseQ39927088
Analysis of duplicated gene sequences associated with tfdR and tfdS in Alcaligenes eutrophus JMP134.Q39931502
Purification and characterization of maleylacetate reductase from Alcaligenes eutrophus JMP134(pJP4).Q39937471
Phenoxyacetic acid degradation by the 2,4-dichlorophenoxyacetic acid (TFD) pathway of plasmid pJP4: mapping and characterization of the TFD regulatory gene, tfdR.Q39947627
Transposon mutagenesis and cloning analysis of the pathways for degradation of 2,4-dichlorophenoxyacetic acid and 3-chlorobenzoate in Alcaligenes eutrophus JMP134(pJP4).Q39966254
Purification and characterization of 2,4-dichlorophenoxyacetate/alpha-ketoglutarate dioxygenase.Q42286412
Chemical structure and biodegradability of halogenated aromatic compounds. Substituent effects on 1,2-dioxygenation of catecholQ42935823
Genetic and molecular analysis of a regulatory region of the herbicide 2,4-dichlorophenoxyacetate catabolic plasmid pJP4.Q46319795
Sequence analysis of the 2,4-dichlorophenol hydroxylase gene tfdB and 3,5-dichlorocatechol 1,2-dioxygenase gene tfdC of 2,4-dichlorophenoxyacetic acid degrading plasmid pEST4011.Q48059161
M13 and pUC vectors with new unique restriction sites for cloningQ48105880
The pRSET family of T7 promoter expression vectors for Escherichia coliQ48133282
New plasmids of herbicide 2,4-dichlorophenoxyacetic acid biodegradationQ68859694
Nucleotide homology and organization of chlorocatechol oxidation genes of plasmids pJP4 and pAC27Q69819367
The 2,4-dichlorophenol hydroxylase of Alcaligenes eutrophus JMP134 is a homotetramerQ73195958
A novel plasmid pIJB1 possessing a putative 2,4-dichlorophenoxyacetate degradative transposon Tn5530 in Burkholderia cepacia strain 2aQ74352495
Dynamics of multigene expression during catabolic adaptation of Ralstonia eutropha JMP134 (pJP4) to the herbicide 2, 4-dichlorophenoxyacetateQ78016805
P433issue15
P407language of work or nameEnglishQ1860
P921main subjectRalstonia eutrophaQ12740362
P304page(s)4165-4172
P577publication date2000-08-01
P1433published inJournal of BacteriologyQ478419
P1476titleCharacterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4)
P478volume182

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cites work (P2860)
Q4799999916S rRNA gene phylogeny and tfdA gene analysis of 2,4-D-degrading bacteria isolated in China
Q39680415A new modified ortho cleavage pathway of 3-chlorocatechol degradation by Rhodococcus opacus 1CP: genetic and biochemical evidence
Q60015928Adaptative Potential of Alkaliphilic Bacteria towards Chloroaromatic Substrates Assessed by agfp-tagged 2,4-D Degradation Plasmid
Q33297421Bacterial diversity in soil enrichment cultures amended with 2 (2-methyl-4-chlorophenoxy) propionic acid (mecoprop).
Q42006049Chloromethylmuconolactones as critical metabolites in the degradation of chloromethylcatechols: recalcitrance of 2-chlorotoluene
Q42906331Chlorophenol hydroxylases encoded by plasmid pJP4 differentially contribute to chlorophenoxyacetic acid degradation
Q33811786Cloning and characterisation of a novel 2,4-dichlorophenol hydroxylase from a metagenomic library derived from polychlorinated biphenyl-contaminated soil
Q64102321Comparative Genomic Analysis of the Regulation of Aromatic Metabolism in Betaproteobacteria
Q36105600Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation
Q44121881Complete characterisation of Tn5530 from Burkholderia cepacia strain 2a (pIJB1) and studies of 2,4-dichlorophenoxyacetate uptake by the organism
Q41872358Degradation of 4-chloro-2-methylphenoxyacetic acid in top- and subsoil is quantitatively linked to the class III tfdA gene
Q39490939Degradation of substituted phenylurea herbicides by Arthrobacter globiformis strain D47 and characterization of a plasmid-associated hydrolase gene, puhA
Q40280487Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers
Q44597037Effect of integration of a GFP reporter gene on fitness of Ralstonia eutropha during growth with 2,4‐dichlorophenoxyacetic acid
Q39726133Efficient turnover of chlorocatechols is essential for growth of Ralstonia eutropha JMP134(pJP4) in 3-chlorobenzoic acid
Q37572327Genetic analysis of phenoxyalkanoic acid degradation in Sphingomonas herbicidovorans MH.
Q42612979Genetic characterization of 2,4,6-trichlorophenol degradation in Cupriavidus necator JMP134.
Q42628960Genetic organization of the catabolic plasmid pJP4 from Ralstonia eutropha JMP134 (pJP4) reveals mechanisms of adaptation to chloroaromatic pollutants and evolution of specialized chloroaromatic degradation pathways
Q35172595Genomic islands and the evolution of catabolic pathways in bacteria
Q33758509Identification and characterization of genes involved in the downstream degradation pathway of gamma-hexachlorocyclohexane in Sphingomonas paucimobilis UT26.
Q39679890Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134
Q33358902Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP134.
Q38233499Microbial degradation of 2,4-dichlorophenoxyacetic acid: Insight into the enzymes and catabolic genes involved, their regulation and biotechnological implications.
Q90360030Microbial degradation of halogenated aromatics: molecular mechanisms and enzymatic reactions
Q38503934Molecular and population analyses of a recombination event in the catabolic plasmid pJP4.
Q30667247Novel 2,4-dichlorophenoxyacetic acid degradation genes from oligotrophic Bradyrhizobium sp. strain HW13 isolated from a pristine environment.
Q34317818Organization and regulation of pentachlorophenol-degrading genes in Sphingobium chlorophenolicum ATCC 39723.
Q42122213Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate
Q37317963Root nodule Bradyrhizobium spp. harbor tfdAalpha and cadA, homologous with genes encoding 2,4-dichlorophenoxyacetic acid-degrading proteins
Q27665863Structural Insight into the Expanded PCB-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution
Q21142625The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader
Q37583361The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation
Q51140265The key role of chlorocatechol 1,2-dioxygenase in phytoremoval and degradation of catechol by transgenic Arabidopsis.
Q39679842Two chlorocatechol catabolic gene modules on plasmid pJP4.
Q33996820Two similar gene clusters coding for enzymes of a new type of aerobic 2-aminobenzoate (anthranilate) metabolism in the bacterium Azoarcus evansii
Q33939941Two structurally different dienelactone hydrolases (TfdEI and TfdEII) from Cupriavidus necator JMP134 plasmid pJP4 catalyse cis- and trans-dienelactones with similar efficiency.

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